CX301088
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301088 vs. ExPASy Swiss-Prot
Match: YS1_MAIZE (Iron-phytosiderophore transporter yellow stripe 1 OS=Zea mays GN=YS1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.523e-29 Identity = 56/84 (66.67%), Postives = 69/84 (82.14%), Query Frame = 3 Query: 3 TAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIP 254 TA+GCVVAPLTF LFY AFD+GNP G +KAPY ++YRNMAILGVEGFS LP+HCL L GFFAFA ++ RD+ P+K A+++P Sbjct: 520 TAMGCVVAPLTFLLFYNAFDIGNPTGYWKAPYGLIYRNMAILGVEGFSVLPRHCLALSAGFFAFAFVFSVARDVLPRKYARFVP 603
BLAST of CX301088 vs. ExPASy Swiss-Prot
Match: YSL12_ORYSJ (Probable metal-nicotianamine transporter YSL12 OS=Oryza sativa subsp. japonica GN=YSL12 PE=2 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 1.025e-28 Identity = 60/85 (70.59%), Postives = 71/85 (83.53%), Query Frame = 3 Query: 3 TAIGCVVAPLTFFLFYKAF-DVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIP 254 TA+GCV+AP F+LFYKAF D+G EY APYAIVYRNMAILGV+GFS+LP+HCL LCY FFA AIA NL RDL+P K+A++IP Sbjct: 543 TAMGCVIAPCVFWLFYKAFADIGVSGTEYPAPYAIVYRNMAILGVDGFSSLPKHCLTLCYIFFAAAIAINLARDLAPSKVARFIP 627
BLAST of CX301088 vs. ExPASy Swiss-Prot
Match: YSL5_ORYSJ (Probable metal-nicotianamine transporter YSL5 OS=Oryza sativa subsp. japonica GN=YSL5 PE=2 SV=3) HSP 1 Score: 119.013 bits (297), Expect = 7.347e-27 Identity = 47/83 (56.63%), Postives = 71/83 (85.54%), Query Frame = 3 Query: 6 AIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIP 254 A+GC++APLT +LF+ AFD+G+PDGEYKAP+AI++R MAI+G+EGF+ALP+HCL++C FF A+ NL++D+ P ++++IP Sbjct: 504 ALGCIIAPLTLWLFWTAFDIGDPDGEYKAPFAIIFREMAIIGIEGFAALPRHCLEICCVFFLAALIINLMKDVVPNHVSRFIP 586
BLAST of CX301088 vs. ExPASy Swiss-Prot
Match: YSL14_ORYSJ (Probable metal-nicotianamine transporter YSL14 OS=Oryza sativa subsp. japonica GN=YSL14 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.347e-27 Identity = 55/85 (64.71%), Postives = 71/85 (83.53%), Query Frame = 3 Query: 3 TAIGCVVAPLTFFLFYKAF-DVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIP 254 T +GCV+AP F+LFYKAF ++G EY APYAIVYRNMAILGV+GF++LP++CL LCY FFA AIA NL+RDL+P K++++IP Sbjct: 553 TGMGCVIAPCVFWLFYKAFSNIGTSGTEYPAPYAIVYRNMAILGVDGFNSLPENCLTLCYIFFAAAIAINLIRDLAPHKVSRFIP 637
BLAST of CX301088 vs. ExPASy Swiss-Prot
Match: YSL10_ORYSJ (Probable metal-nicotianamine transporter YSL10 OS=Oryza sativa subsp. japonica GN=YSL10 PE=2 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 8.123e-26 Identity = 53/85 (62.35%), Postives = 67/85 (78.82%), Query Frame = 3 Query: 3 TAIGCVVAPLTFFLFYKAF-DVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIP 254 TA+GCV+AP F+LFYKAF D+G P EY +P A+VYRNMAILGV+G +LP+HCL LC GFF AIA NL RDL+ K+A+++P Sbjct: 508 TAMGCVIAPSVFWLFYKAFHDIGMPGSEYPSPNALVYRNMAILGVQGLGSLPKHCLDLCIGFFVAAIAVNLARDLAAPKVARFLP 592
BLAST of CX301088 vs. ExPASy Swiss-Prot
Match: YSL11_ORYSJ (Probable metal-nicotianamine transporter YSL11 OS=Oryza sativa subsp. japonica GN=YSL11 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.363e-25 Identity = 50/84 (59.52%), Postives = 66/84 (78.57%), Query Frame = 3 Query: 3 TAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIP 254 TA+GCV+AP F+LFYK+F++G DG Y APY I+YRNMAILGV G S+LP++CL LCY F A NL++DL P+++AK+IP Sbjct: 539 TAMGCVIAPCVFWLFYKSFNIGASDGAYPAPYTIMYRNMAILGVNGLSSLPKYCLTLCYIAFVAAFIINLIKDLVPERVAKYIP 622
BLAST of CX301088 vs. ExPASy Swiss-Prot
Match: YSL7_ARATH (Probable metal-nicotianamine transporter YSL7 OS=Arabidopsis thaliana GN=YSL7 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 8.981e-25 Identity = 54/85 (63.53%), Postives = 65/85 (76.47%), Query Frame = 3 Query: 3 TAIGCVVAPLTFFLFYKAF-DVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIP 254 TA+GCV++P F+LFYKAF D G P Y APYA+VYRNM+ILGVEGFSALP+HCL LCY FFA A+ N +RD K A++IP Sbjct: 513 TAMGCVISPCVFWLFYKAFPDFGQPGTAYPAPYALVYRNMSILGVEGFSALPKHCLMLCYIFFAAAVIVNGIRDALGPKWARFIP 597
BLAST of CX301088 vs. ExPASy Swiss-Prot
Match: YSL13_ORYSJ (Probable metal-nicotianamine transporter YSL13 OS=Oryza sativa subsp. japonica GN=YSL13 PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 3.773e-23 Identity = 51/85 (60.00%), Postives = 68/85 (80.00%), Query Frame = 3 Query: 3 TAIGCVVAPLTFFLFYKAFD-VGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIP 254 TA+GCV+AP F+LFYKAFD +G +Y AP A V+R++AILGV+GFS+LP++CL LCY FFA AI NL+RDL P K++++IP Sbjct: 548 TAMGCVIAPCVFWLFYKAFDNIGISGSDYPAPNAAVFRSIAILGVDGFSSLPKNCLNLCYAFFAAAIVVNLIRDLVP-KVSRFIP 631
BLAST of CX301088 vs. ExPASy Swiss-Prot
Match: YSL8_ARATH (Probable metal-nicotianamine transporter YSL8 OS=Arabidopsis thaliana GN=YSL8 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 4.612e-21 Identity = 47/85 (55.29%), Postives = 63/85 (74.12%), Query Frame = 3 Query: 3 TAIGCVVAPLTFFLFYKAFD-VGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIP 254 TA+GC+V+P F+LFYKAFD +G P+ EY AP+A VYR+MA LGVEG S+LP+ CL LCY FF AI NL++D + +++P Sbjct: 548 TAMGCLVSPCVFWLFYKAFDDLGLPNSEYPAPFATVYRSMAKLGVEGVSSLPRDCLMLCYVFFGVAILINLIKDCLGNRWGRFVP 632
BLAST of CX301088 vs. ExPASy Swiss-Prot
Match: YSL5_ARATH (Probable metal-nicotianamine transporter YSL5 OS=Arabidopsis thaliana GN=YSL5 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.342e-20 Identity = 47/85 (55.29%), Postives = 62/85 (72.94%), Query Frame = 3 Query: 3 TAIGCVVAPLTFFLFYKAFD-VGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIP 254 TA+GCVV+P F+LFYKAFD +G P+ EY AP+A VYR+MA LGVEG ++LP+ CL LCY FF AI N+++D ++IP Sbjct: 538 TAMGCVVSPCVFWLFYKAFDDLGLPNTEYPAPFATVYRSMAKLGVEGVASLPRECLVLCYAFFGVAILVNIVKDSLHSNWGRFIP 622 The following BLAST results are available for this feature:
BLAST of CX301088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301088 ID=CX301088; Name=CX301088; organism=Citrus sinensis; type=EST; length=254bpback to top |