DY257628

Overview
NameDY257628
Unique NameDY257628
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: SPOP_BOVIN (Speckle-type POZ protein OS=Bos taurus GN=SPOP PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.819e-25
Identity = 66/183 (36.07%), Postives = 100/183 (54.64%), Query Frame = 3
Query:    9 QFGKLLEGGRFTDVNFEVDGERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 557
            + G L E  RFTD    V G+ F AHK +LA RSPVF A     +++     +++ D+E  VFK ++ FIY    P+++             MA  LLAAAD+YALERLK++CE  LC ++++   A  L LA+ H   QLK   + FI    +   V++T G++ +  S P ++ E  + +A
Sbjct:  189 ELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDK------------MADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFI--NYHASDVLETSGWKSMVVSHPHLVAEAYRSLA 357          
BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: SPOP_XENTR (Speckle-type POZ protein OS=Xenopus tropicalis GN=spop PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.187e-24
Identity = 66/183 (36.07%), Postives = 100/183 (54.64%), Query Frame = 3
Query:    9 QFGKLLEGGRFTDVNFEVDGERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 557
            + G L E  RFTD    V G+ F AHK +LA RSPVF A     +++     ++++D+E  VFK ++ FIY     +++             MA  LLAAAD+YALERLK++CE  LC ++++   A  L LA+ H   QLK   + FI    +   VM+T G++ +  S P ++ E  + +A
Sbjct:  189 ELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIKDVEPDVFKEMMCFIYTGKASNLDK------------MADDLLAAADKYALERLKVMCEEALCSNLSVENAAEILILADLHSADQLKTQAVDFI--NYHASDVMETSGWKSMVVSHPHLVAEAYRSLA 357          
BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: SPOPB_XENLA (Speckle-type POZ protein B OS=Xenopus laevis GN=spop-B PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.187e-24
Identity = 66/183 (36.07%), Postives = 100/183 (54.64%), Query Frame = 3
Query:    9 QFGKLLEGGRFTDVNFEVDGERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 557
            + G L E  RFTD    V G+ F AHK +LA RSPVF A     +++     ++++D+E  VFK ++ FIY     +++             MA  LLAAAD+YALERLK++CE  LC ++++   A  L LA+ H   QLK   + FI    +   VM+T G++ +  S P ++ E  + +A
Sbjct:  189 ELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIKDVEPDVFKEMMCFIYTGKASNLDK------------MADDLLAAADKYALERLKVMCEEALCSNLSVENAAEILILADLHSADQLKTQAVDFI--NYHASDVMETSGWKSMVVSHPHLVAEAYRSLA 357          
BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: SPOPA_XENLA (Speckle-type POZ protein A OS=Xenopus laevis GN=spop-A PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.187e-24
Identity = 66/183 (36.07%), Postives = 100/183 (54.64%), Query Frame = 3
Query:    9 QFGKLLEGGRFTDVNFEVDGERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 557
            + G L E  RFTD    V G+ F AHK +LA RSPVF A     +++     ++++D+E  VFK ++ FIY     +++             MA  LLAAAD+YALERLK++CE  LC ++++   A  L LA+ H   QLK   + FI    +   VM+T G++ +  S P ++ E  + +A
Sbjct:  189 ELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIKDVEPDVFKEMMCFIYTGKASNLDK------------MADDLLAAADKYALERLKVMCEEALCSNLSVENAAEILILADLHSADQLKTQAVDFI--NYHASDVMETSGWKSMVVSHPHLVAEAYRSLA 357          
BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: RDX_DROME (Protein roadkill OS=Drosophila melanogaster GN=rdx PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.187e-24
Identity = 64/184 (34.78%), Postives = 101/184 (54.89%), Query Frame = 3
Query:    6 KQFGKLLEGGRFTDVNFEVDGERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 557
            +  G L +  +F+DV   V G  F AHK +LA RS VF A     ++++    + + D++  V K +L FIY    P++E             MA  LLAAAD+YALE+LK++CE  LC ++++ T A TL LA+ H   QLKA  + FI +  +   VM+T G++ +  +   ++ E  + +A
Sbjct:  643 EDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARSDVFAAMFEHEMEERKLNRVAITDVDHEVLKEMLRFIYTGKAPNLEK------------MADDLLAAADKYALEKLKVMCEEALCVNLSVETAAETLILADLHSADQLKAQTIDFINT--HATDVMETSGWQNMITTHSHLIAEAFRALA 812          
BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: TDPZ4_MOUSE (TD and POZ domain-containing protein 4 OS=Mus musculus GN=Tdpoz4 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.364e-24
Identity = 65/181 (35.91%), Postives = 98/181 (54.14%), Query Frame = 3
Query:   15 GKLLEGGRFTDVNFEVDGERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 557
            G+L E   FTD +  V G  F AHK +LA RSPVF+A     ++++ T C+++ D++  VFK ++ FIY   +P +           S  MA  LLAAADRY L+ LK++CE  LC ++++   A TL +A+ H    +K   L FI        V +T G+  + ES P ++ E    +A
Sbjct:  179 GELWENPLFTDCSLLVAGHEFRAHKAILAARSPVFRAMFEHQMEERLTNCVEIHDLDPQVFKEMMGFIYTGKVPHLH----------SHSMACDLLAAADRYGLKDLKVMCEDALCRNLSVENAAHTLIVADLHSTEHVKTQALDFII--VYASEVSKTSGWMSMVESHPRLVAEAFHSLA 347          
BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: TDPZ5_MOUSE (TD and POZ domain-containing protein 5 OS=Mus musculus GN=Tdpoz5 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.264e-21
Identity = 62/173 (35.84%), Postives = 93/173 (53.76%), Query Frame = 3
Query:   15 GKLLEGGRFTDVNFEVDGERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVL 533
            G+L E   FTD    V G  F AHK +LA RSPVF+A     ++++     ++ D++  VFK ++ FIY    P ++          S  MA  +L AAD+Y LE LK+LCE  LC ++++   A TL LA+ H   QLK   L FIA   +   V +T  ++ + E+ P ++
Sbjct:  179 GELWENSLFTDCCLLVAGHEFRAHKAILAARSPVFRAMFEHEMEERLGNPTEIHDLDPKVFKEMMGFIYTGKAPHLQ----------SHSMATDVLTAADKYGLEGLKVLCEDALCRNLSVENAAQTLILADLHKREQLKTQALYFIAL--HASVVSETSEWKSMMETHPHLV 339          
BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: TDPZ1_MOUSE (TD and POZ domain-containing protein 1 OS=Mus musculus GN=Tdpoz1 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.861e-21
Identity = 65/181 (35.91%), Postives = 92/181 (50.83%), Query Frame = 3
Query:   15 GKLLEGGRFTDVNFEVDGERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 557
            G+L E   FTD    V G  F AHK +LA RSPVF+A     +K+     IK+ ++   VFK ++ FIY    P +           S  MA  +L AAD+Y L  LK+LCE  LC ++++     TL LA+ H   +LK   L FIA       V +T  ++ + ES P ++ E  Q +A
Sbjct:  179 GELWENSLFTDCCLLVAGHEFRAHKAILAARSPVFRAMFEHEMKESLKTPIKIHNLNPQVFKEMMGFIYTGKAPHLH----------SHSMACDVLPAADKYGLVSLKVLCEDALCRNLSVKNATHTLILADLHSTEKLKTQALDFIA--YYASEVCETSEWKSMVESHPHLVAEAFQSLA 347          
BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: TDPZ3_MOUSE (TD and POZ domain-containing protein 3 OS=Mus musculus GN=Tdpoz3 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.269e-20
Identity = 63/181 (34.81%), Postives = 96/181 (53.04%), Query Frame = 3
Query:   15 GKLLEGGRFTDVNFEVDGERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 557
            G+L +   FTD    V G  F AHK +LA RSPVF+A     +K+     I++ D+++ VFK ++ FIY    P +           S  MA  +L AAD+Y L  LK+LCE  LC ++++   A TL LAE +   +LK+  L FIA   +   V +T  ++ + +S P ++ E    +A
Sbjct:  179 GELWDNSLFTDCCLLVAGHEFKAHKAILAARSPVFRAMFEHEMKESLKNPIEIMDLDLDVFKEMMGFIYTGKAPHLH----------SHSMACDVLPAADKYGLVGLKVLCEDVLCRNLSVKNAAHTLILAELNSTEKLKSQALDFIAI--HACEVSETSEWKSMWKSHPHLVAEAFHSLA 347          
BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: BAT43_CAEEL (BTB and MATH domain-containing protein 43 OS=Caenorhabditis elegans GN=bath-43 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.343e-18
Identity = 57/163 (34.97%), Postives = 87/163 (53.37%), Query Frame = 3
Query:   69 ERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 557
            + F  HK +LA RS VF A     +++ +T    V+D+E  V + LL ++Y      +E             MAQ L+AAAD+Y L+RLK++CE  LC  +  +  + TL LA+ +  SQL+A  + FI    N   VM T+G+E L    P +L E+ + +A
Sbjct:  280 QTFHIHKAILAARSRVFSAMFEHHMQESDTNMTTVDDIEPEVMRELLVYMYTGQTKYIEQ------------MAQSLIAAADKYQLDRLKVMCEQALCYQLTTDNASLTLMLADMYSASQLRAHSINFI--NVNANEVMDTEGWEDLVRDHPKLLEEVFRALA 428          
The following BLAST results are available for this feature:
BLAST of DY257628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
SPOP_BOVIN9.819e-2536.07Speckle-type POZ protein OS=Bos taurus GN=SPOP PE=... [more]
SPOP_XENTR2.187e-2436.07Speckle-type POZ protein OS=Xenopus tropicalis GN=... [more]
SPOPB_XENLA2.187e-2436.07Speckle-type POZ protein B OS=Xenopus laevis GN=sp... [more]
SPOPA_XENLA2.187e-2436.07Speckle-type POZ protein A OS=Xenopus laevis GN=sp... [more]
RDX_DROME2.187e-2434.78Protein roadkill OS=Drosophila melanogaster GN=rdx... [more]
TDPZ4_MOUSE6.364e-2435.91TD and POZ domain-containing protein 4 OS=Mus musc... [more]
TDPZ5_MOUSE2.264e-2135.84TD and POZ domain-containing protein 5 OS=Mus musc... [more]
TDPZ1_MOUSE3.861e-2135.91TD and POZ domain-containing protein 1 OS=Mus musc... [more]
TDPZ3_MOUSE4.269e-2034.81TD and POZ domain-containing protein 3 OS=Mus musc... [more]
BAT43_CAEEL2.343e-1834.97BTB and MATH domain-containing protein 43 OS=Caeno... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3CC07FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257628 ID=DY257628; Name=DY257628; organism=Citrus sinensis; type=EST; length=802bp
TTGGTAAGCAATTTGGGAAGCTTTTGGAAGGCGGAAGGTTTACTGATGTG
AATTTTGAAGTTGATGGAGAAAGGTTTGCTGCCCACAAGTTGGTACTTGC
TACACGTTCACCTGTGTTCAAGGCACAACTTTTTGGTCCATTAAAGGATC
AAAACACTCAATGCATTAAGGTGGAAGACATGGAAGTCCCAGTTTTTAAG
GCATTATTGCATTTTATCTACTGGGATGCTCTGCCAGATATGGAAGACCT
TGTTGATCTGAGTCCAAAATGGGCTTCTACACTGATGGCTCAGCATCTTC
TTGCTGCAGCAGACCGGTATGCACTTGAGAGGCTCAAATTACTCTGTGAG
GCTAAGCTCTGTGAAGATGTTGCTATAAACACTGTTGCCACCACGTTGGC
CTTGGCAGAGCAGCATCACTGTTCCCAACTGAAAGCTGTTTGTCTCAAAT
TCATTGCATCACCTGAAAATTTAAAAGCTGTGATGCAAACAGATGGGTTT
GAATACTTAAAAGAAAGTTGCCCTTCTGTCCTCACCGAACTGCTACAATA
TGTGGCCAAAATAGGCGAGCATTCTGTCATTGCTTCAGGGCATGGGAACG
AGACATTACCAGATGGCTGTGATGTCAATGGGAGGCGGGTGAAGCAGAGG
GTACATTGATAAAGGAATGACTGATCTTCCATTATCTTTACCACCCCGGA
AAAAAAAAGTTAGGTCCAAACATTTTTGGATTATACTAACAGTTGATAAA
TTATTTGTTAAATATAACATTAGTGGTTCATTAATATTTTCTACAATTTT
TG
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