DY257628

Overview
NameDY257628
Unique NameDY257628
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: MEL26_CAEEL (Protein maternal effect lethal 26 OS=Caenorhabditis elegans GN=mel-26 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 8.622e-13
Identity = 54/185 (29.19%), Postives = 91/185 (49.19%), Query Frame = 3 
Query:    6 KQFGKLLEGGRFTDVNFEVDGERFAAHKLVLATRSPVFKAQLFGPLKDQ-NTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFI-ASPENLKAVMQTDGFEYLKESCPSVLTELLQYV 554
            + + +L       D    V+G+   AHK VLA RSPVF A L     D+  +  + + DM+  V   ++++IY       +D+ D         MA  LL AAD+Y LE LK  CE  L E++ I    + L + + +   +L+   + +I A P+N   V  T G+E + +  P+++T++   +
Sbjct:  189 EDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPVFNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCN--KDITD---------MATALLIAADKYRLEELKSHCEKYLVENINIENACSLLIIGDLYSAPKLRKRAVTYILARPKN---VTGTPGWEDILKGHPNLITDIFSQI 359
The following BLAST results are available for this feature:
BLAST of DY257628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
MEL26_CAEEL8.622e-1329.19Protein maternal effect lethal 26 OS=Caenorhabditi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3CC07FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257628 ID=DY257628; Name=DY257628; organism=Citrus sinensis; type=EST; length=802bp
TTGGTAAGCAATTTGGGAAGCTTTTGGAAGGCGGAAGGTTTACTGATGTG
AATTTTGAAGTTGATGGAGAAAGGTTTGCTGCCCACAAGTTGGTACTTGC
TACACGTTCACCTGTGTTCAAGGCACAACTTTTTGGTCCATTAAAGGATC
AAAACACTCAATGCATTAAGGTGGAAGACATGGAAGTCCCAGTTTTTAAG
GCATTATTGCATTTTATCTACTGGGATGCTCTGCCAGATATGGAAGACCT
TGTTGATCTGAGTCCAAAATGGGCTTCTACACTGATGGCTCAGCATCTTC
TTGCTGCAGCAGACCGGTATGCACTTGAGAGGCTCAAATTACTCTGTGAG
GCTAAGCTCTGTGAAGATGTTGCTATAAACACTGTTGCCACCACGTTGGC
CTTGGCAGAGCAGCATCACTGTTCCCAACTGAAAGCTGTTTGTCTCAAAT
TCATTGCATCACCTGAAAATTTAAAAGCTGTGATGCAAACAGATGGGTTT
GAATACTTAAAAGAAAGTTGCCCTTCTGTCCTCACCGAACTGCTACAATA
TGTGGCCAAAATAGGCGAGCATTCTGTCATTGCTTCAGGGCATGGGAACG
AGACATTACCAGATGGCTGTGATGTCAATGGGAGGCGGGTGAAGCAGAGG
GTACATTGATAAAGGAATGACTGATCTTCCATTATCTTTACCACCCCGGA
AAAAAAAAGTTAGGTCCAAACATTTTTGGATTATACTAACAGTTGATAAA
TTATTTGTTAAATATAACATTAGTGGTTCATTAATATTTTCTACAATTTT
TG
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