EY665151
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.514e-21 Identity = 88/257 (34.24%), Postives = 117/257 (45.53%), Query Frame = 2 Query: 128 SPTGSSRKGSFVVRAASTPPVKQGADRPLWFASK----------QSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835 SP S GS V T +G W+ S +S SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PE+L + G+ + WF+ G I G +Y +P ++ ++ LMG E R A G +G+A D YPG F+PLGL D ++ + + +KNGRL M G+FVQ VTG P ADPVN Sbjct: 21 SPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFPELLARNGV--KFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRV---AGNGPLGEAE------------DLLYPGGS-FDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 253
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.514e-21 Identity = 88/257 (34.24%), Postives = 117/257 (45.53%), Query Frame = 2 Query: 128 SPTGSSRKGSFVVRAASTPPVKQGADRPLWFASK----------QSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835 SP S GS V T +G W+ S +S SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PE+L + G+ + WF+ G I G +Y +P ++ ++ LMG E R A G +G+A D YPG F+PLGL D ++ + + +KNGRL M G+FVQ VTG P ADPVN Sbjct: 21 SPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFPELLARNGV--KFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRV---AGNGPLGEAE------------DLLYPGGS-FDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 253
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.813e-21 Identity = 84/235 (35.74%), Postives = 111/235 (47.23%), Query Frame = 2 Query: 170 AASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADPY--------TLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835 AAS G DR L+ S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ + WF+ G I G +Y P ++ ++ LMG E R G +G+ DP YPG F+PLGL D + + + +KNGRL M G+FVQ VTG P ADPVN Sbjct: 55 AASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLARNGV--KFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAG----GPLGEVT------------DPIYPGGN-FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 264
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.813e-21 Identity = 81/226 (35.84%), Postives = 111/226 (49.12%), Query Frame = 2 Query: 197 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835 G DR + S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ + WF+ G I G +Y +P ++ ++ LMG E R G +G+ DP YPG F+PLGL +D ++ + + +KNGRL M G+FVQ VTG P ADPVN Sbjct: 53 GPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGV--KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----GPLGEVV------------DPLYPGGS-FDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.813e-21 Identity = 82/225 (36.44%), Postives = 109/225 (48.44%), Query Frame = 2 Query: 197 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPV 832 G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PEIL K G+ + WF+ G I G +Y +P ++ ++ LMG E R G +G+ D YPG F+PLGL D ++ + + +KNGRL M G+FVQ VTG P ADPV Sbjct: 51 GEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRWAMLGALGCVFPEILSKNGV--KFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYR----VGGGPLGEGL------------DKIYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPV 250
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.674e-20 Identity = 81/226 (35.84%), Postives = 110/226 (48.67%), Query Frame = 2 Query: 197 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835 G DR + S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ + WF+ G I G +Y +P ++ ++ LMG E R G +G+ DP YPG F+PLGL D ++ + + +KNGRL M G+FVQ VTG P ADPVN Sbjct: 53 GPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGV--KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.674e-20 Identity = 83/243 (34.16%), Postives = 117/243 (48.15%), Query Frame = 2 Query: 146 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835 RK + + S+ G+DR L+ S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ + WF+ G I G +Y +P ++ ++ LMG E R G +G+ DP YPG F+PLGL + ++ + + +KNGRL M G+FVQ VTG P ADPVN Sbjct: 35 RKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGV--KFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAG----GPLGEIV------------DPLYPGGS-FDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVN 252
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.186e-20 Identity = 84/243 (34.57%), Postives = 116/243 (47.74%), Query Frame = 2 Query: 146 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835 RK + + S+ G DR + S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ + WF+ G I G +Y +P ++ ++ LMG E R + LG DP YPG F+PLGL +D ++ + + +KNGRL M G+FVQ VTG P ADPVN Sbjct: 35 RKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGV--KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----------------EPLGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVN 252
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.186e-20 Identity = 86/256 (33.59%), Postives = 121/256 (47.27%), Query Frame = 2 Query: 128 SPTGSSRKGS--FVVRAASTPPVKQGA-----DRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835 SP +G+ F +R ++ V G+ DR + S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ + WF+ G I G +Y +P ++ ++ LMG E R G +G+ DP YPG F+PLGL D ++ + + +KNGRL M G+FVQ VTG P ADPVN Sbjct: 11 SPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLSRNGV--KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG----GPLGEVT------------DPIYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 241
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.855e-20 Identity = 76/213 (35.68%), Postives = 101/213 (47.42%), Query Frame = 2 Query: 197 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADPYTLFV--------LEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAP 799 G DR + S Q+ SYL+G PGDYG+D GLS DPE F + + L EVI+GR+AMLGA+G I PE+L K + + WF+ G I G +Y +P + ++ LMG E R G G+ YPG F+PLGL D + + + +KNGRL M G+FVQ VTG P Sbjct: 49 GPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEA---FAKNRAL---EVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPV-WFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGE----------------GNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238 The following BLAST results are available for this feature:
BLAST of EY665151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665151 ID=EY665151; Name=EY665151; organism=Citrus sinensis; type=EST; length=869bpback to top |