EY665145

Overview
NameEY665145
Unique NameEY665145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_XYLF2 (GTP-binding protein era homolog OS=Xylella fastidiosa (strain M23) GN=era PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.198e-15
Identity = 41/91 (45.05%), Postives = 65/91 (71.43%), Query Frame = 2
Query:  383 HKSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALV 655
            ++ G +AV+ +PNVGKS+L N ++G ++SIV+N+PQTT HR+LGI + P+ Q+IL DTPG+  ++ H ++ +M +  R  G   D  AAL+
Sbjct:    7 YRCGRIAVIGRPNVGKSTLTNALVGTKISIVSNRPQTTRHRLLGIATFPEGQIILVDTPGLHREQKHPMNRLMNRTAR--GSLEDVDAALL 95          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_XYLFM (GTP-binding protein era homolog OS=Xylella fastidiosa (strain M12) GN=era PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.565e-15
Identity = 40/91 (43.96%), Postives = 65/91 (71.43%), Query Frame = 2
Query:  383 HKSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALV 655
            ++ G +AV+ +PNVGKS+L N ++G ++SIV+N+PQTT HR+LGI + P+ Q++L DTPG+  ++ H ++ +M +  R  G   D  AAL+
Sbjct:    7 YRCGRIAVIGRPNVGKSTLTNALVGTKISIVSNRPQTTRHRLLGIATFPEGQIVLVDTPGLHREQKHPMNRLMNRTAR--GSLEDVDAALL 95          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_XYLFA (GTP-binding protein era homolog OS=Xylella fastidiosa GN=era PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.565e-15
Identity = 40/91 (43.96%), Postives = 65/91 (71.43%), Query Frame = 2
Query:  383 HKSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALV 655
            ++ G +AV+ +PNVGKS+L N ++G ++SIV+N+PQTT HR+LGI + P+ Q++L DTPG+  ++ H ++ +M +  R  G   D  AAL+
Sbjct:    7 YRCGRIAVIGRPNVGKSTLTNALVGTKISIVSNRPQTTRHRLLGIATFPEGQIVLVDTPGLHREQKHPMNRLMNRTAR--GSLEDVDAALL 95          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_CLOB8 (GTP-binding protein era homolog OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=era PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.565e-15
Identity = 42/91 (46.15%), Postives = 62/91 (68.13%), Query Frame = 2
Query:  386 KSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVD 658
            KSG+V ++ +PNVGKS+L N ++G++LSIV+NKPQTT + I  I +G DYQMI  DTPGI + K H L   M+ + + +  + D +  L +
Sbjct:    3 KSGFVTIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGIHKPK-HKLGEYMVNSAKESTKDVDLVLFLTN 92          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_VIBPA (GTP-binding protein era homolog OS=Vibrio parahaemolyticus GN=era PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.670e-15
Identity = 42/113 (37.17%), Postives = 74/113 (65.49%), Query Frame = 2
Query:  338 DDYEIE*FDYASH------PNHKSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVD 658
            ++++I+ F +ASH       N   G++A++ +PNVGKS+L N+++GQ++SI + KPQTT HRI+G+ +  DYQ I  DTPG+  ++   ++ +M +   S+  + + +  LVD
Sbjct:    4 NEFDIDAF-FASHGEVSSPENQHCGFIAIVGRPNVGKSTLLNKILGQKISITSRKPQTTRHRIMGVDTDGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNLVFFLVD 115          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_STRMK (GTP-binding protein era homolog OS=Stenotrophomonas maltophilia (strain K279a) GN=era PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.487e-15
Identity = 39/96 (40.62%), Postives = 64/96 (66.67%), Query Frame = 2
Query:  383 HKSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSA--GINADCIAALVDAW 664
            H  G VAV+ +PNVGKS+L N ++G ++SIV+N+PQTT HR+LGI + P+ Q++L DTPG+ + +   ++ +M +  R +  G++A  +      W
Sbjct:    7 HHCGSVAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATYPEGQLVLVDTPGLHKVQKRAMNRVMNRAARGSLEGVDAGLLVIEAGRW 102          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_STRM5 (GTP-binding protein era homolog OS=Stenotrophomonas maltophilia (strain R551-3) GN=era PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.487e-15
Identity = 39/96 (40.62%), Postives = 64/96 (66.67%), Query Frame = 2
Query:  383 HKSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSA--GINADCIAALVDAW 664
            H  G VAV+ +PNVGKS+L N ++G ++SIV+N+PQTT HR+LGI + P+ Q++L DTPG+ + +   ++ +M +  R +  G++A  +      W
Sbjct:    7 HHCGSVAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATYPEGQLVLVDTPGLHKVQKRAMNRVMNRAARGSLEGVDAGLLVIEAGRW 102          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_ALKMQ (GTP-binding protein era homolog OS=Alkaliphilus metalliredigens (strain QYMF) GN=era PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.487e-15
Identity = 40/93 (43.01%), Postives = 64/93 (68.82%), Query Frame = 2
Query:  380 NHKSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVD 658
            ++KSG+V ++ +PNVGKS+L NQ+IG++++I+++KPQTT ++I  + S  D+Q++  DTPGI + K H L   M+K  R      D +  LVD
Sbjct:    2 SYKSGFVTIIGRPNVGKSTLMNQIIGEKIAIMSDKPQTTRNKIQSVYSQEDFQIVFLDTPGIHKPK-HKLGEYMVKVARDTLKEVDVVLFLVD 93          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_HELMI (GTP-binding protein era homolog OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=era PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.554e-15
Identity = 40/92 (43.48%), Postives = 64/92 (69.57%), Query Frame = 2
Query:  386 KSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVDA 661
            +SG+++++ +PNVGKS+L NQ+IG++++I+++KPQTT +RI+G+ + P  Q I  DTPGI + K H L  +M+   R      D I  +VDA
Sbjct:    5 RSGFISIIGRPNVGKSTLMNQLIGKKVAIMSDKPQTTRNRIVGVLNAPKGQAIFLDTPGIHKPK-HKLGEIMVTTARKTLGEVDLILYVVDA 95          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_VIBVY (GTP-binding protein era homolog OS=Vibrio vulnificus (strain YJ016) GN=era PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.947e-15
Identity = 38/96 (39.58%), Postives = 64/96 (66.67%), Query Frame = 2
Query:  371 SHPNHKSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVD 658
            S  N   G++A++ +PNVGKS+L N+++GQ++SI + KPQTT HRI+G+ +  DYQ I  DTPG+  ++   ++ +M +   S+  + + +  LVD
Sbjct:   20 SSENQHCGFIAIVGRPNVGKSTLLNKILGQKISITSRKPQTTRHRIMGVDTDGDYQAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNLVFFLVD 115          
The following BLAST results are available for this feature:
BLAST of EY665145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 264
Match NameE-valueIdentityDescription
ERA_XYLF21.198e-1545.05GTP-binding protein era homolog OS=Xylella fastidi... [more]
ERA_XYLFM1.565e-1543.96GTP-binding protein era homolog OS=Xylella fastidi... [more]
ERA_XYLFA1.565e-1543.96GTP-binding protein era homolog OS=Xylella fastidi... [more]
ERA_CLOB81.565e-1546.15GTP-binding protein era homolog OS=Clostridium bei... [more]
ERA_VIBPA2.670e-1537.17GTP-binding protein era homolog OS=Vibrio parahaem... [more]
ERA_STRMK3.487e-1540.63GTP-binding protein era homolog OS=Stenotrophomona... [more]
ERA_STRM53.487e-1540.63GTP-binding protein era homolog OS=Stenotrophomona... [more]
ERA_ALKMQ3.487e-1543.01GTP-binding protein era homolog OS=Alkaliphilus me... [more]
ERA_HELMI4.554e-1543.48GTP-binding protein era homolog OS=Heliobacterium ... [more]
ERA_VIBVY5.947e-1539.58GTP-binding protein era homolog OS=Vibrio vulnific... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665145 ID=EY665145; Name=EY665145; organism=Citrus sinensis; type=EST; length=851bp
CTCGGNAGCAGGCGAATGAAATCAACATGAAAGCAAAGCTCCGATAATGG
AGCTAGGTGTACACATATCCTCTTCTTTTGGCAGTCTGTTCCCTCATTAC
AGCACATTAACAGCATATAGAGAAATTAAATTTGGGTTCCAAGGCAGAAG
TACTACTATCACTTGTAAAAGCAATGAACACCAAAGCCTTGTATTGTCAG
AGAAAGAAGTACAGCTACAAAAGCTTTGGAGTAACCAACGGGAAATGGAC
TTAAACGATGGTGATGAAATGGAATTTGACGATGCATCGTCGTTTCTATC
TCTGTCTGAAAAACCAGACAGGAATATGGCTTCGCCGGACGACTACGAGA
TTGAATAATTTGACTACGCCTCTCATCCAAATCACAAAAGCGGATATGTG
GCAGTACTATGGAAGCCAAATGTGGGGAAAAGTTCTCTCGCAAACCAAAT
GATCGGTCAACAGCTCTCAATTGTTACAAATAAGCCCCAAACTACGGGGC
ACCGTATTCTTGGTATCTGCTCTGGTCCAGATTATCAGATGATACTTTAT
GATACCCCTGGCATAATTGAGAAGAAAATTCACATGTTGGACTCTATGAT
GATGAAGAATGTCCGCAGTGCTGGGATTAACGCTGACTGTATTGCTGCTC
TCGTTGATGCTTGGTAAGCTCCTGAAAGAATTGATGACATTTCGCACTAC
GGAGTGGGAGACCACAAGATAAATTGCCTATATTGTCCGTACTGAATAAC
ATGATCTGATCAGCCGTGGTGAAATCGCTAAAAGCTTGAGTGCATGAGAA
ATTACAGATGTGATGAGGTATACCCGTGACGCAAATATGCCATGGAGTGG
A
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