CX300924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF24_ARATH (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.015e-23 Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 3 Query: 18 EQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 173 E AL CPRC STNTKFCY+NNYSLTQPR+FCKTCRRYWT GG+LRN+PVGGG Sbjct: 86 EAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGG 137
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF56_ARATH (Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 1.326e-23 Identity = 44/56 (78.57%), Postives = 49/56 (87.50%), Query Frame = 3 Query: 6 RPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 173 RP + CPRC ST+TKFCYYNNYSL+QPRYFCKTCRRYWT+GG+LRNIPVGGG Sbjct: 66 RPPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGG 121
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF57_ARATH (Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.954e-23 Identity = 42/54 (77.78%), Postives = 49/54 (90.74%), Query Frame = 3 Query: 12 QKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 173 Q +Q L CPRCNS NTKFCYYNNYSL+QPR+FCK+CRRYWT GG+LRN+P+GGG Sbjct: 36 QDQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGG 89
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF51_ARATH (Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana GN=DOF5.1 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.858e-23 Identity = 43/55 (78.18%), Postives = 49/55 (89.09%), Query Frame = 3 Query: 9 PQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 173 P E AL CPRC+STNTKFCY+NNYSLTQPR+FCK CRRYWT GG+LR++PVGGG Sbjct: 89 PLPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGG 143
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF35_ARATH (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.594e-23 Identity = 44/57 (77.19%), Postives = 48/57 (84.21%), Query Frame = 3 Query: 3 ARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 173 A E +CPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWT+GGSLRN+PVGGG Sbjct: 17 ANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGG 73
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF54_ARATH (Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 1.466e-22 Identity = 48/110 (43.64%), Postives = 62/110 (56.36%), Query Frame = 3 Query: 21 QALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGXXXXXXXXXXXXXLPDPATPPS-----HHPHQNPKIHDHGQDLNLAFPAATTQGYRSIS 335 Q+L CPRCNS NTKFCYYNNY+L+QPR+FCK CRRYWT+GG LRN+PVGGG A P+ HH + H + + A+ + ++S Sbjct: 49 QSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKRSKTKQVPSSSSADKPTTTQDDHHVEEKSSTGSHSSSESSSLTASNSTTVAAVS 158
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF17_ARATH (Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.914e-22 Identity = 43/55 (78.18%), Postives = 51/55 (92.73%), Query Frame = 3 Query: 9 PQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 173 P++EQ L CPRC+S NTKFCYYNNY+L+QPR+FCK CRRYWT+GG+LRNIPVGGG Sbjct: 28 PEQEQ-LKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGG 81
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF22_ARATH (Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 3.266e-22 Identity = 41/52 (78.85%), Postives = 47/52 (90.38%), Query Frame = 3 Query: 18 EQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 173 E AL CPRC+S NTKFCY+NNY+LTQPR+FCK CRRYWT GG+LRN+PVGGG Sbjct: 91 EGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGG 142
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF16_ARATH (Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana GN=DOF1.6 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.265e-22 Identity = 40/55 (72.73%), Postives = 48/55 (87.27%), Query Frame = 3 Query: 9 PQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 173 P + L CPRCNST TKFCYYNNY+L QPRY+CK+CRRYWT+GG+LR++PVGGG Sbjct: 23 PNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTLRDVPVGGG 77
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF31_ARATH (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 5.570e-22 Identity = 39/53 (73.58%), Postives = 50/53 (94.34%), Query Frame = 3 Query: 15 KEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 173 +++ L CPRC+S NTKFCYYNNY+L+QPR+FCK+CRRYWT+GG+LRN+PVGGG Sbjct: 25 EQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGG 77 The following BLAST results are available for this feature:
BLAST of CX300924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300924 ID=CX300924; Name=CX300924; organism=Citrus sinensis; type=EST; length=383bpback to top |