CX300924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF12_ARATH (Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.570e-22 Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 3 Query: 33 CPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 173 CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWT+GGSLRNIPVGGG Sbjct: 40 CPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGG 86
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF11_ARATH (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1 PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 5.570e-22 Identity = 40/49 (81.63%), Postives = 47/49 (95.92%), Query Frame = 3 Query: 27 LNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 173 L CPRC+S+NTKFCYYNNY+LTQPR+FCK CRRYWT+GG+LRN+PVGGG Sbjct: 77 LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGG 125
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF14_ARATH (Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana GN=DOF1.4 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.117e-21 Identity = 41/56 (73.21%), Postives = 50/56 (89.29%), Query Frame = 3 Query: 6 RPQKEQA-LNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGG 170 +PQ+ Q L CPRC+S+NTKFCYYNNYSL+QPR+FCK C+RYWT GG+LRN+PVGG Sbjct: 19 QPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGG 74
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF47_ARATH (Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana GN=DOF4.7 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.764e-21 Identity = 38/54 (70.37%), Postives = 46/54 (85.19%), Query Frame = 3 Query: 9 PQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGG 170 P + L CPRC+S NTKFCYYNNYSL+QPR++CK CRRYWT GG+LRN+P+GG Sbjct: 35 PATQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIGG 88
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF58_ARATH (Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana GN=DOF5.8 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.159e-21 Identity = 38/52 (73.08%), Postives = 48/52 (92.31%), Query Frame = 3 Query: 15 KEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGG 170 +++ L+CPRC STNTKFCYYNNY+ +QPR+FCK+CRRYWT GG+LR+IPVGG Sbjct: 28 QQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGG 79
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF34_ARATH (Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana GN=DOF3.4 PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 1.051e-20 Identity = 37/53 (69.81%), Postives = 48/53 (90.57%), Query Frame = 3 Query: 15 KEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 173 +++ L CPRC+S+NTKFCYYNNY+ +QPR+FCK CRRYWT GG+LR++PVGGG Sbjct: 26 QQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGG 78
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF44_ARATH (Dof zinc finger protein DOF4.4 OS=Arabidopsis thaliana GN=DOF4.4 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.809e-20 Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = 3 Query: 33 CPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGG 170 CPRC+S NTKFC+YNNYS +QPRYFCK CRRYWT GG+LRNIPVGG Sbjct: 26 CPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGG 71
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF1A_ARATH (Dof zinc finger protein DOF1.10 OS=Arabidopsis thaliana GN=DOF1.10 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.893e-20 Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = 3 Query: 3 ARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 173 A + ++ + CPRC S NTKFCYYNNY++ QPRYFC+ C+RYWT GGS+RN+PVG G Sbjct: 124 ALKKPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSG 180
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: MNB1A_MAIZE (Dof zinc finger protein MNB1A OS=Zea mays GN=MNB1A PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 3.379e-19 Identity = 36/47 (76.60%), Postives = 43/47 (91.49%), Query Frame = 3 Query: 33 CPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 173 CPRC S +TKFCYYNNY+ +QPR+FCK CRRYWT+GG+LRN+PVGGG Sbjct: 49 CPRCASRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGG 95
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF52_ARATH (Dof zinc finger protein DOF5.2 OS=Arabidopsis thaliana GN=DOF5.2 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 4.414e-19 Identity = 35/52 (67.31%), Postives = 44/52 (84.62%), Query Frame = 3 Query: 18 EQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 173 ++ L CPRCNS TKFCYYNNY++ QPR+FCK C+RYWT GG++RN+PVG G Sbjct: 135 DKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAG 186 The following BLAST results are available for this feature:
BLAST of CX300924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300924 ID=CX300924; Name=CX300924; organism=Citrus sinensis; type=EST; length=383bpback to top |