CX300923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_TAKRU (40S ribosomal protein S7 OS=Takifugu rubripes GN=rps7 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.341e-25 Identity = 63/125 (50.40%), Postives = 86/125 (68.80%), Query Frame = 1 Query: 25 TTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGS----AVQRPRSRTLTAVH 387 +T KI K +P EFE ++QAL +LE N +LK+ L++L I A +++V G+RKAI+++VP K+++KI RLVRELEKKFSGK VV IA RRI+ P + S +RPRSRTLT+VH Sbjct: 3 STSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGSRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRSKNKQKRPRSRTLTSVH 126
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_RAT (40S ribosomal protein S7 OS=Rattus norvegicus GN=Rps7 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.341e-25 Identity = 63/125 (50.40%), Postives = 85/125 (68.00%), Query Frame = 1 Query: 25 TTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV----QRPRSRTLTAVH 387 ++ KI K +P EFE ++QAL +LE N +LK+ L++L I A +++V G RKAI+++VP K+++KI RLVRELEKKFSGK VV IA RRI+ P + S +RPRSRTLTAVH Sbjct: 3 SSSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVH 126
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_MOUSE (40S ribosomal protein S7 OS=Mus musculus GN=Rps7 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.341e-25 Identity = 63/125 (50.40%), Postives = 85/125 (68.00%), Query Frame = 1 Query: 25 TTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV----QRPRSRTLTAVH 387 ++ KI K +P EFE ++QAL +LE N +LK+ L++L I A +++V G RKAI+++VP K+++KI RLVRELEKKFSGK VV IA RRI+ P + S +RPRSRTLTAVH Sbjct: 3 SSSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVH 126
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_HUMAN (40S ribosomal protein S7 OS=Homo sapiens GN=RPS7 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.341e-25 Identity = 63/125 (50.40%), Postives = 85/125 (68.00%), Query Frame = 1 Query: 25 TTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV----QRPRSRTLTAVH 387 ++ KI K +P EFE ++QAL +LE N +LK+ L++L I A +++V G RKAI+++VP K+++KI RLVRELEKKFSGK VV IA RRI+ P + S +RPRSRTLTAVH Sbjct: 3 SSSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVH 126
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_FELCA (40S ribosomal protein S7 OS=Felis catus GN=RPS7 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.341e-25 Identity = 63/125 (50.40%), Postives = 85/125 (68.00%), Query Frame = 1 Query: 25 TTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV----QRPRSRTLTAVH 387 ++ KI K +P EFE ++QAL +LE N +LK+ L++L I A +++V G RKAI+++VP K+++KI RLVRELEKKFSGK VV IA RRI+ P + S +RPRSRTLTAVH Sbjct: 3 SSSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVH 126
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_BOVIN (40S ribosomal protein S7 OS=Bos taurus GN=RPS7 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.341e-25 Identity = 63/125 (50.40%), Postives = 85/125 (68.00%), Query Frame = 1 Query: 25 TTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV----QRPRSRTLTAVH 387 ++ KI K +P EFE ++QAL +LE N +LK+ L++L I A +++V G RKAI+++VP K+++KI RLVRELEKKFSGK VV IA RRI+ P + S +RPRSRTLTAVH Sbjct: 3 SSSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVH 126
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_XENLA (40S ribosomal protein S7 OS=Xenopus laevis GN=rps7 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 9.111e-25 Identity = 63/125 (50.40%), Postives = 84/125 (67.20%), Query Frame = 1 Query: 25 TTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV----QRPRSRTLTAVH 387 +T KI K +P EFE ++QAL +LE N +LK+ L++L I A +++V RKAI+++VP K+++KI RLVRELEKKFSGK VV IA RRI+ P + S +RPRSRTLTAVH Sbjct: 3 STSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGAGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVH 126
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_DICDI (40S ribosomal protein S7 OS=Dictyostelium discoideum GN=rps7 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.111e-25 Identity = 62/121 (51.24%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 34 KKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV---QRPRSRTLTAVH 387 KKI K TEFE TVAQAL DLEN N ELK DLKDL + ++DV+ ++KA+V++VP+R K Y KI +L E+EKK GK V+ IA RRI+R P + + +RP SRT+ AVH Sbjct: 4 KKIIKPAGKVATEFENTVAQALVDLENNNAELK-DLKDLSVCSVKEVDVAESKKAVVIFVPFRQLKNYNKIQQKLTYEVEKKLGGKQVMFIAQRRIIRKPASNNKIKMQKRPISRTIKAVH 123
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_SCHPO (40S ribosomal protein S7 OS=Schizosaccharomyces pombe GN=rps7 PE=1 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 1.190e-24 Identity = 59/119 (49.58%), Postives = 84/119 (70.59%), Query Frame = 1 Query: 37 KIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV--QRPRSRTLTAVH 387 KI K ++PTE + VAQ L+DLE++++++ +L+ L I A +++V G +KAIVV+VP L KA+ K +RL RELEKKF+ + V+ IA RRI+ P + S V +RPRSRTLTAVH Sbjct: 6 KIVKRSSSQPTETDLLVAQCLYDLESSSKDMAKELRPLQITSAREVEVGGGKKAIVVFVPQPLLKAFHKCQARLTRELEKKFADRHVIFIAQRRILPKPGRKSRVTQKRPRSRTLTAVH 124
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_ANOGA (40S ribosomal protein S7 OS=Anopheles gambiae GN=RpS7 PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 2.030e-24 Identity = 61/121 (50.41%), Postives = 86/121 (71.07%), Query Frame = 1 Query: 37 KIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKG----SAVQRPRSRTLTAVH 387 K+ K + EP FE + QA+ +LE N +LK L+DLYI +A +++ + N+KAI++YVP +KA++K+ +RLVRELEKKFSGK VV IA RRI+ P +G + +RPRSRTLTAV+ Sbjct: 6 KVIKAGNGEPDAFETQIGQAILELE-MNSDLKPQLRDLYITRAREVEFN-NKKAIIIYVPVPKQKAFQKVQTRLVRELEKKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRSRTLTAVY 124 The following BLAST results are available for this feature:
BLAST of CX300923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300923 ID=CX300923; Name=CX300923; organism=Citrus sinensis; type=EST; length=388bpback to top |