CX300923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_CULQU (40S ribosomal protein S7 OS=Culex quinquefasciatus GN=RpS7 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.522e-24 Identity = 61/121 (50.41%), Postives = 86/121 (71.07%), Query Frame = 1 Query: 37 KIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKG----SAVQRPRSRTLTAVH 387 K+ K AEP FE + QA+ +LE N +LK L+DL+I +A +++ + N+KAIV+YVP +KA++K+ +RLVRELEKKFSGK VV I RRI+ P++G + +RPRSRTLTAV+ Sbjct: 6 KVIKSGGAEPDAFEGQIGQAILELE-MNSDLKPQLRDLHITRAREIEFN-NKKAIVIYVPVPKQKAFQKVQTRLVRELEKKFSGKHVVFIGERRILPKPQRGRRDPNKQKRPRSRTLTAVY 124
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_CAEEL (40S ribosomal protein S7 OS=Caenorhabditis elegans GN=rps-7 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.905e-24 Identity = 60/122 (49.18%), Postives = 85/122 (69.67%), Query Frame = 1 Query: 37 KIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV-----QRPRSRTLTAVH 387 K+ K +E E+ V+QAL DLE TN +++S LK+LYI ++++ GN+ AI++YVP KA+ KIH LVRELEKKF G+D++++A RRI+ P++GS +RPRSRTLTAVH Sbjct: 7 KLLKSDGKVVSEIEKQVSQALIDLE-TNDDVQSQLKELYIVGVKEVEL-GNKSAIIIYVPVPQLKAFHKIHPALVRELEKKFGGRDILILAKRRILPKPQRGSKARPQKQKRPRSRTLTAVH 126
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_SPOFR (40S ribosomal protein S7 OS=Spodoptera frugiperda GN=RpS7 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.828e-23 Identity = 61/121 (50.41%), Postives = 86/121 (71.07%), Query Frame = 1 Query: 37 KIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV----QRPRSRTLTAVH 387 KI K AEP FE +++QAL +LE TN +LK+ L++LYI +A ++++ N+K+I++YVP KA++KI RLVRELEKKFSGK VV I R+I+ P + V +RPRSRTLT+V+ Sbjct: 4 KIIKASAAEPDVFETSISQALVELE-TNSDLKAQLRELYITKAKEIELH-NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFIGDRKILPKPSHKTRVANKQKRPRSRTLTSVY 122
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_MANSE (40S ribosomal protein S7 OS=Manduca sexta GN=RpS7 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.527e-22 Identity = 59/121 (48.76%), Postives = 84/121 (69.42%), Query Frame = 1 Query: 37 KIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV----QRPRSRTLTAVH 387 KI K E FE +++QAL +LE TN +LK+ L++LYI +A ++++ N+K+I++YVP KA++KI RLVRELEKKFSGK VV I R+I+ P + V +RPRSRTLT+V+ Sbjct: 4 KILKAGGTEADSFETSISQALVELE-TNSDLKAQLRELYITKAKEIELH-NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFIGDRKILPKPSHKTRVANKQKRPRSRTLTSVY 122
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_DROME (40S ribosomal protein S7 OS=Drosophila melanogaster GN=RpS7 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.219e-22 Identity = 58/121 (47.93%), Postives = 87/121 (71.90%), Query Frame = 1 Query: 37 KIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGS----AVQRPRSRTLTAVH 387 KI K ++P +FE+++AQAL +LE N +LK L+DL+I +A +++ G++KA+++YVP +K ++KI LVRELEKKFSGK VV+IA R+I+ P + + +RPRSRTLTAV+ Sbjct: 6 KIIKPGGSDPDDFEKSIAQALVELE-ANSDLKPYLRDLHITRAREIEF-GSKKAVIIYVPIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVY 124
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7B_YEAST (40S ribosomal protein S7-B OS=Saccharomyces cerevisiae GN=RPS7B PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.231e-21 Identity = 52/110 (47.27%), Postives = 75/110 (68.18%), Query Frame = 1 Query: 64 PTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGS--AVQRPRSRTLTAVH 387 P+E E VA+ DLE+++ ELK+DL+ L I ++DV+G +KA+V++VP AY K+ ++L RELEKKF + V+ +A RRI+ P + S +RPRSRTLTAVH Sbjct: 13 PSELELQVAKTFIDLESSSPELKADLRPLQIKSIREIDVTGGKKALVLFVPVPALSAYHKVQTKLTRELEKKFPDRHVIFLAERRILPKPSRTSRQVQKRPRSRTLTAVH 122
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_DROYA (40S ribosomal protein S7 OS=Drosophila yakuba GN=RpS7 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.100e-21 Identity = 57/121 (47.11%), Postives = 86/121 (71.07%), Query Frame = 1 Query: 37 KIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGS----AVQRPRSRTLTAVH 387 KI K ++P +FE+++AQAL +LE N +LK L+DL+I +A +++ G++KA+++YVP +K ++KI LVRELEKKFSGK VV+I R+I+ P + + +RPRSRTLTAV+ Sbjct: 6 KIIKPGGSDPDDFEKSIAQALVELE-ANSDLKPYLRDLHITRAREIEF-GSKKAVIIYVPIPQQKVFQKIQIILVRELEKKFSGKHVVVIGERKILPKPTRKARNPLKQKRPRSRTLTAVY 124
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7A_YEAST (40S ribosomal protein S7-A OS=Saccharomyces cerevisiae GN=RPS7A PE=1 SV=4) HSP 1 Score: 98.9821 bits (245), Expect = 7.981e-21 Identity = 50/110 (45.45%), Postives = 73/110 (66.36%), Query Frame = 1 Query: 64 PTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGS--AVQRPRSRTLTAVH 387 PTE E VAQA +LEN++ ELK++L+ L ++DV+G +KA+ ++VP + K+ ++L RELEKKF + V+ +A RRI+ P + S +RPRSRTLTAVH Sbjct: 13 PTELELQVAQAFVELENSSPELKAELRPLQFKSIREIDVAGGKKALAIFVPVPSLAGFHKVQTKLTRELEKKFQDRHVIFLAERRILPKPSRTSRQVQKRPRSRTLTAVH 122
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_NEUCR (40S ribosomal protein S7 OS=Neurospora crassa GN=rps-7 PE=3 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 3.961e-20 Identity = 51/114 (44.74%), Postives = 75/114 (65.79%), Query Frame = 1 Query: 64 PTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGS------AVQRPRSRTLTAVH 387 P+E E VA AL+DLE+ +LK+ L+ L A +++V +KAIV++VP + + ++ RL RELEKKFS + V+++A+RRI+ PK+ S +RPRSRTLTAVH Sbjct: 19 PSELETAVAGALYDLESNTADLKAALRPLQFVSAREIEVGHGKKAIVIFVPVPSLQGFHRVQQRLTRELEKKFSDRHVLIVASRRILPRPKRSSRSRNTLKQKRPRSRTLTAVH 132 The following BLAST results are available for this feature:
BLAST of CX300923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300923 ID=CX300923; Name=CX300923; organism=Citrus sinensis; type=EST; length=388bpback to top |