EY665123

Overview
NameEY665123
Unique NameEY665123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB8_DISOM (Ras-related protein Rab-8 OS=Discopyge ommata PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.475e-56
Identity = 103/175 (58.86%), Postives = 138/175 (78.86%), Query Frame = 1
Query:  175 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGK 699
            M   YDYLFKLLLIGDSGVGK+CLL RF++D++  ++ISTIG+DFKIRTVE DGK IKLQIWDTAGQERFRTIT++YYRGA GI+ VYD+T+++SF+N+K W+  I+ +AS +V ++++GNKCD+   + VS E  +  A + GI F+ETSAK S NV +AF+ +A  I  ++ K
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIMTKLNK 175          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 1.475e-56
Identity = 101/175 (57.71%), Postives = 138/175 (78.86%), Query Frame = 1
Query:  175 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGK 699
            M   YDYLFKLLLIGDSGVGK+CLL RF++D++  ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+  I+ +AS +V ++++GNKCD+   + VS E  +  A + GI F+ETSAK S NV +AF  +A  I  ++ +
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNR 175          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.926e-56
Identity = 103/175 (58.86%), Postives = 138/175 (78.86%), Query Frame = 1
Query:  175 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGK 699
            M   YDYLFKLLLIGDSGVGK+C+L RF++D++  ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+  I+ +AS +V K+++GNKCD+   + VS E  +  A + GI FMETSAK + NV  AF  +A  IK +M K
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDK 175          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB8A_MOUSE (Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.926e-56
Identity = 103/175 (58.86%), Postives = 138/175 (78.86%), Query Frame = 1
Query:  175 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGK 699
            M   YDYLFKLLLIGDSGVGK+C+L RF++D++  ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+  I+ +AS +V K+++GNKCD+   + VS E  +  A + GI FMETSAK + NV  AF  +A  IK +M K
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDK 175          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB8A_MACFA (Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.926e-56
Identity = 103/175 (58.86%), Postives = 138/175 (78.86%), Query Frame = 1
Query:  175 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGK 699
            M   YDYLFKLLLIGDSGVGK+C+L RF++D++  ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+  I+ +AS +V K+++GNKCD+   + VS E  +  A + GI FMETSAK + NV  AF  +A  IK +M K
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDK 175          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB8A_HUMAN (Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.926e-56
Identity = 103/175 (58.86%), Postives = 138/175 (78.86%), Query Frame = 1
Query:  175 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGK 699
            M   YDYLFKLLLIGDSGVGK+C+L RF++D++  ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+  I+ +AS +V K+++GNKCD+   + VS E  +  A + GI FMETSAK + NV  AF  +A  IK +M K
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDK 175          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB8A_CANFA (Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.926e-56
Identity = 103/175 (58.86%), Postives = 138/175 (78.86%), Query Frame = 1
Query:  175 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGK 699
            M   YDYLFKLLLIGDSGVGK+C+L RF++D++  ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+  I+ +AS +V K+++GNKCD+   + VS E  +  A + GI FMETSAK + NV  AF  +A  IK +M K
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDK 175          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB8A_BOVIN (Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.515e-56
Identity = 103/175 (58.86%), Postives = 138/175 (78.86%), Query Frame = 1
Query:  175 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGK 699
            M   YDYLFKLLLIGDSGVGK+C+L RF++D++  ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+  I+ +AS +V K+++GNKCD+   + VS E  +  A + GI FMETSAK + NV  AF  +A  IK +M K
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAKMDK 175          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.285e-56
Identity = 100/172 (58.14%), Postives = 134/172 (77.91%), Query Frame = 1
Query:  187 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGKS 702
            YD L KLLLIGDSGVGKSCLLLRF +D +  S+I+TIG+DFKIRT++   + +KLQ+WDTAGQERFRTIT++YYRGA GI++VYDVTD++SFNN++ W   +  YA++ V  +LVGNKCDL   +VVS E  +A AD+ GIPF+E S+K + NV + F ++A  I+D + K+
Sbjct:    8 YDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAKT 179          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB1_THEAN (Ras-related protein Rab-1 OS=Theileria annulata GN=rab1 PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.291e-56
Identity = 111/187 (59.36%), Postives = 146/187 (78.07%), Query Frame = 1
Query:  184 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGKSPFMXNAXPXTVQI 741
            EYDYLFK+++IGDSG GKS LLLRFAD++Y ESY+STIGVDFKI+TV+ D  TIKLQIWDTAGQERFRTITS+YYRGAHGII VYDVT++ SF+++ + WL +ID+YA+ NV KLL+GNK DL  ++VV  + AK  A++  + ++E SAK  +NV +AF  +A  +KD++ + P   NA   TV +
Sbjct:    3 EYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLVDSRVVLADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYP--SNAPTSTVNL 187          
The following BLAST results are available for this feature:
BLAST of EY665123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB8_DISOM1.475e-5658.86Ras-related protein Rab-8 OS=Discopyge ommata PE=2... [more]
RAB8B_HUMAN1.475e-5657.71Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8... [more]
RAB8A_RAT1.926e-5658.86Ras-related protein Rab-8A OS=Rattus norvegicus GN... [more]
RAB8A_MOUSE1.926e-5658.86Ras-related protein Rab-8A OS=Mus musculus GN=Rab8... [more]
RAB8A_MACFA1.926e-5658.86Ras-related protein Rab-8A OS=Macaca fascicularis ... [more]
RAB8A_HUMAN1.926e-5658.86Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8... [more]
RAB8A_CANFA1.926e-5658.86Ras-related protein Rab-8A OS=Canis familiaris GN=... [more]
RAB8A_BOVIN2.515e-5658.86Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A ... [more]
RYL1_YARLI3.285e-5658.14Ras-like GTP-binding protein RYL1 OS=Yarrowia lipo... [more]
RAB1_THEAN4.291e-5659.36Ras-related protein Rab-1 OS=Theileria annulata GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665123 ID=EY665123; Name=EY665123; organism=Citrus sinensis; type=EST; length=878bp
CCTTTGCTTGTCGTTTCAGTATTTTCTTTCTTTTTTTTCTTTTTTGTCTT
GTCTTCTGTTTTTGTTGACATTTAATTTCCCGGCGAAACTCATATCACGA
GATCTCGCCGAAGATAATAATCTGTTTTGGTTAACCGAACCCGAAGCTTT
TTTCTTTTACACAAATCTACGACGATGAATCCTGAATATGACTATCTGTT
TAAGCTTCTGCTTATTGGAGATTCCGGTGTTGGCAAATCTTGTCTTCTCT
TGAGATTTGCTGATGATTCATATATTGAGAGTTACATCAGCACCATAGGA
GTTGATTTTAAAATACGCACTGTTGAGCAAGATGGGAAGACCATTAAACT
TCAAATTTGGGATACTGCTGGTCAAGAAAGATTTAGGACAATCACCAGCA
GCTACTACCGTGGGGCACATGGTATCATAATTGTTTATGATGTGACAGAC
CAAGAGAGCTTCAATAATGTCAAGCAGTGGTTGAATGAAATTGACCGTTA
TGCTAGTGATAATGTCAACAAACTTCTGGTTGGAAACAAGTGTGATCTCA
CTGCAAATAAGGTTGTCTCGTACGAAACAGCCAAGGCATTTGCAGATGAA
ATTGGAATACCTTTCATGGAAACTAGTGCAAAAGATTCTACCAACGTGGG
ACAGGCATTCATGGCCATGGCTGCTTTCATCAAGGATAGAATGGGCAAGT
CACCATTCATGANCAATGCANGGCCTNCAACTGTACAGATCAAAAGGCAG
CCTGTTGCACANAAAAGTGGCTGCTGCTCTACTAAGTATCATTGGATANT
ATCTGCCNGGGGTCTGCTGGACCCAAGGGGGGGGAATGCTTTTATCTTTT
CAGTTGAAAGCTTTGTATCTGGACCAAC
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