EY665123

Overview
NameEY665123
Unique NameEY665123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.604e-56
Identity = 106/190 (55.79%), Postives = 139/190 (73.16%), Query Frame = 1
Query:  175 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGKSPFMXNAXPXTVQIK 744
            M   YD+LFKLLLIGDSGVGK+CL++RFA+D++  +YISTIG+DF+IRTV+ +GK IKLQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+  I   AS  V +LL+GNKCD+ A + V  E A   A E GI F ETSAK S NV +AF ++A  I  + G      N  P +  +K
Sbjct:    1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRLKNNNKPPSTDLK 190          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB8B_BOVIN (Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.319e-56
Identity = 100/175 (57.14%), Postives = 137/175 (78.29%), Query Frame = 1
Query:  175 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGK 699
            M   YDYLFKLLLIGDSGVGK+CLL RF++D++  ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+  I+ +AS +V ++++GNKCD+   + VS E  +  A + GI F+E SAK S NV +AF  +A  I  ++ +
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDIMTKLNR 175          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RABA_DICDI (Ras-related protein RabA OS=Dictyostelium discoideum GN=rabA PE=2 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 9.558e-56
Identity = 105/200 (52.50%), Postives = 143/200 (71.50%), Query Frame = 1
Query:  175 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGKSPFMXNAXPXTVQIKRQPVAXKSGC 774
            M+ +Y++LFK + +GDSGVGKS +LLRF +D++ ESYISTIGVDFKI+TV  +GK IKLQIWDTAGQERFR   +S YRG H +++VYDVTDQ SF NV +W+ EI+RYA DNV K+++GNK D+ + KVV    A+ FAD + I F ETSAK + N+  AF+++     DR+    F  ++   +  I ++P + KS C
Sbjct:    1 MSKKYEHLFKFIFVGDSGVGKSSILLRFTEDTFTESYISTIGVDFKIKTVYIEGKAIKLQIWDTAGQERFRVHNNSQYRGCHAVMVVYDVTDQRSFENVAKWIQEIERYARDNVIKMIIGNKSDMISQKVVDPFLAQEFADSLDITFKETSAKQAINIEDAFISLVKLCIDRI--EEFKPSSTSSSTIILKKPQSQKSNC 198          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.558e-56
Identity = 102/175 (58.29%), Postives = 134/175 (76.57%), Query Frame = 1
Query:  175 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGK 699
            M   YDYLFKLLLIGDSGVGK+C L RF++D++  ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF N++ W+  I+ +AS +V K+++GNKCD    + VS E  +  A   GI FMETSAK + N+  AF  +A  IK +M K
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDK 175          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.248e-55
Identity = 107/190 (56.32%), Postives = 140/190 (73.68%), Query Frame = 1
Query:  175 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGKSPFMXNAXPXTVQIK 744
            M   YD+LFKLLLIGDSGVGK+CL++RFA+D++  +YISTIG+DFKIRTVE +GK IKLQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+  I   AS  V +LL+GNKCD+ A + V  E A   A E GI F ETSAK S NV +AF ++A  I  + G      ++ P +  +K
Sbjct:    1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDILLKSGGRRSGNHSKPSSTDLK 190          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 2.129e-55
Identity = 106/190 (55.79%), Postives = 140/190 (73.68%), Query Frame = 1
Query:  175 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGKSPFMXNAXPXTVQIK 744
            M   YD+LFKLLLIGDSGVGK+CL++RFA+D++  +YISTIG+DFKIRTVE +GK IKLQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+  I   AS  V +LL+GNKCD+ A + V  E A+  A E  I F ETSAK S NV +AF ++A  I  + G      ++ P +  +K
Sbjct:    1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRSGNSSKPSSTDLK 190          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.129e-55
Identity = 106/190 (55.79%), Postives = 140/190 (73.68%), Query Frame = 1
Query:  175 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGKSPFMXNAXPXTVQIK 744
            M   YD+LFKLLLIGDSGVGK+CL++RFA+D++  +YISTIG+DFKIRTV+ +GK IKLQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+  I   AS  V +LL+GNKCD+ A + V  E A+  A E  I F ETSAK S NV +AF ++A  I  + G      N+ P +  +K
Sbjct:    1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRSGTNSKPSSTGLK 190          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.632e-55
Identity = 104/174 (59.77%), Postives = 134/174 (77.01%), Query Frame = 1
Query:  175 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMG 696
            M   YD+LFKLLLIGDSGVGK+CL++RFA+D++  +YISTIG+DFKIRTV+ +GK IKLQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+  I   AS  V +LL+GNKCD+ A + V  E A   A E GI F ETSAK S NV +AF ++A  I  + G
Sbjct:    1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSG 174          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.744e-55
Identity = 102/175 (58.29%), Postives = 137/175 (78.29%), Query Frame = 1
Query:  175 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGK 699
            M   YDYLFKLLLIGDSGVGK+C+L RF++D++  ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+  I+ +AS +V K+++GNK D+   + VS E  +  A + GI FMETSAK + NV  AF  +A  IK +M K
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDK 175          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: SEC4_CANGA (Ras-related protein SEC4 OS=Candida glabrata GN=SEC4 PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.526e-53
Identity = 96/169 (56.80%), Postives = 134/169 (79.29%), Query Frame = 1
Query:  187 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRM 693
            YD + K+LLIGDSGVGKSCLL+RF +D +  S+I+TIG+DFKI+TV+ +GK +KLQ+WDTAGQERFRTIT++YYRGA GII+VYDVTD+ +F N+KQW   ++ +A+D    LLVGNK D+   +VV+YE  +A A E+G+PF+E+SAK+  NV + F  +A  I++++
Sbjct:   17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFANIKQWFKTVNEHANDEAQLLLVGNKSDMD-TRVVTYEQGEALAKELGLPFIESSAKNDDNVNEIFFTLARLIQEKI 184          
The following BLAST results are available for this feature:
BLAST of EY665123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB13_BOVIN5.604e-5655.79Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 ... [more]
RAB8B_BOVIN7.319e-5657.14Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B ... [more]
RABA_DICDI9.558e-5652.50Ras-related protein RabA OS=Dictyostelium discoide... [more]
RAB8A_CHICK9.558e-5658.29Ras-related protein Rab-8A OS=Gallus gallus GN=RAB... [more]
RAB13_MESAU1.248e-5556.32Ras-related protein Rab-13 OS=Mesocricetus auratus... [more]
RAB13_RAT2.129e-5555.79Ras-related protein Rab-13 OS=Rattus norvegicus GN... [more]
RAB13_MOUSE2.129e-5555.79Ras-related protein Rab-13 OS=Mus musculus GN=Rab1... [more]
RAB13_HUMAN3.632e-5559.77Ras-related protein Rab-13 OS=Homo sapiens GN=RAB1... [more]
RAB8A_PONAB4.744e-5558.29Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8... [more]
SEC4_CANGA1.526e-5356.80Ras-related protein SEC4 OS=Candida glabrata GN=SE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665123 ID=EY665123; Name=EY665123; organism=Citrus sinensis; type=EST; length=878bp
CCTTTGCTTGTCGTTTCAGTATTTTCTTTCTTTTTTTTCTTTTTTGTCTT
GTCTTCTGTTTTTGTTGACATTTAATTTCCCGGCGAAACTCATATCACGA
GATCTCGCCGAAGATAATAATCTGTTTTGGTTAACCGAACCCGAAGCTTT
TTTCTTTTACACAAATCTACGACGATGAATCCTGAATATGACTATCTGTT
TAAGCTTCTGCTTATTGGAGATTCCGGTGTTGGCAAATCTTGTCTTCTCT
TGAGATTTGCTGATGATTCATATATTGAGAGTTACATCAGCACCATAGGA
GTTGATTTTAAAATACGCACTGTTGAGCAAGATGGGAAGACCATTAAACT
TCAAATTTGGGATACTGCTGGTCAAGAAAGATTTAGGACAATCACCAGCA
GCTACTACCGTGGGGCACATGGTATCATAATTGTTTATGATGTGACAGAC
CAAGAGAGCTTCAATAATGTCAAGCAGTGGTTGAATGAAATTGACCGTTA
TGCTAGTGATAATGTCAACAAACTTCTGGTTGGAAACAAGTGTGATCTCA
CTGCAAATAAGGTTGTCTCGTACGAAACAGCCAAGGCATTTGCAGATGAA
ATTGGAATACCTTTCATGGAAACTAGTGCAAAAGATTCTACCAACGTGGG
ACAGGCATTCATGGCCATGGCTGCTTTCATCAAGGATAGAATGGGCAAGT
CACCATTCATGANCAATGCANGGCCTNCAACTGTACAGATCAAAAGGCAG
CCTGTTGCACANAAAAGTGGCTGCTGCTCTACTAAGTATCATTGGATANT
ATCTGCCNGGGGTCTGCTGGACCCAAGGGGGGGGAATGCTTTTATCTTTT
CAGTTGAAAGCTTTGTATCTGGACCAAC
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