EY665123

Overview
NameEY665123
Unique NameEY665123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB3_DROME (Ras-related protein Rab-3 OS=Drosophila melanogaster GN=Rab3 PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.411e-52
Identity = 89/172 (51.74%), Postives = 132/172 (76.74%), Query Frame = 1
Query:  187 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGKS 702
            +DY+FKLL+IG+S VGK+  L R+ADDS+  +++ST+G+DFK++TV +  K +KLQIWDTAGQER+RTIT++YYRGA G I++YDVT+++SFN+V+ W+ +I  Y+ DN   +LVGNKCD+   +V+S+E  +  AD++G+ F ETSAK++ NV   F  +   I D+M +S
Sbjct:   18 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSES 189          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.411e-52
Identity = 98/173 (56.65%), Postives = 133/173 (76.88%), Query Frame = 1
Query:  187 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGKSP 705
            YD LFKLLLIGDSGVGK+C+L RF+DD++  ++ISTIG+DFKI+TVE  GK IKLQIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL  ID +A+++V ++L+GNKCD+   +VV     +  A E  I F ETSAK + N+ +AF+ +A   +D + K+P
Sbjct:    6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLA---EDILQKTP 175          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RABG2_DICDI (Ras-related protein RabG2 OS=Dictyostelium discoideum GN=rabG2 PE=3 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 3.182e-51
Identity = 99/170 (58.24%), Postives = 130/170 (76.47%), Query Frame = 1
Query:  196 LFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFI-KDRMGKS 702
            +FK+LLIGDS VGK+ LLLRFAD+S+ E+ ++   VD+K + +  DG+T  LQIWDTAGQERFRTITSS+YRGAHG+++ YDVTDQ ++NNV+ W+ EI RYA   V+++LVGNKCDL   K+V+   A+ +AD +GIPFME SA    NV +AFMAMA  I ++ MG S
Sbjct:    6 VFKILLIGDSAVGKTSLLLRFADNSFQETSVNMTSVDYKNKNIVIDGRTFNLQIWDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVRLWMQEIQRYAVLGVSRVLVGNKCDLEDRKLVNTSIAREYADSLGIPFMEASAATGVNVEEAFMAMANEIYRNHMGGS 175          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB3A_RAT (Ras-related protein Rab-3A OS=Rattus norvegicus GN=Rab3a PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.156e-51
Identity = 94/189 (49.74%), Postives = 134/189 (70.90%), Query Frame = 1
Query:  187 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGKSPFMXNAXPXTVQIKRQP 753
            +DY+FK+L+IG+S VGK+  L R+ADDS+  +++ST+G+DFK++T+ ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W  +I  Y+ DN   LLVGNKCD+   +VVS E  +  AD +G  F E SAKD+ NV Q F  +   I ++M +S  +  A P     K+ P
Sbjct:   19 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSES--LDTADPAVTGAKQGP 205          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB3A_PIG (Ras-related protein Rab-3A OS=Sus scrofa GN=RAB3A PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.156e-51
Identity = 94/189 (49.74%), Postives = 134/189 (70.90%), Query Frame = 1
Query:  187 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGKSPFMXNAXPXTVQIKRQP 753
            +DY+FK+L+IG+S VGK+  L R+ADDS+  +++ST+G+DFK++T+ ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W  +I  Y+ DN   LLVGNKCD+   +VVS E  +  AD +G  F E SAKD+ NV Q F  +   I ++M +S  +  A P     K+ P
Sbjct:   19 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSES--LDTADPAVTGAKQGP 205          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB3A_MOUSE (Ras-related protein Rab-3A OS=Mus musculus GN=Rab3a PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.156e-51
Identity = 94/189 (49.74%), Postives = 134/189 (70.90%), Query Frame = 1
Query:  187 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGKSPFMXNAXPXTVQIKRQP 753
            +DY+FK+L+IG+S VGK+  L R+ADDS+  +++ST+G+DFK++T+ ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W  +I  Y+ DN   LLVGNKCD+   +VVS E  +  AD +G  F E SAKD+ NV Q F  +   I ++M +S  +  A P     K+ P
Sbjct:   19 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSES--LDTADPAVTGAKQGP 205          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB3A_MACFA (Ras-related protein Rab-3A OS=Macaca fascicularis GN=RAB3A PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.156e-51
Identity = 94/189 (49.74%), Postives = 134/189 (70.90%), Query Frame = 1
Query:  187 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGKSPFMXNAXPXTVQIKRQP 753
            +DY+FK+L+IG+S VGK+  L R+ADDS+  +++ST+G+DFK++T+ ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W  +I  Y+ DN   LLVGNKCD+   +VVS E  +  AD +G  F E SAKD+ NV Q F  +   I ++M +S  +  A P     K+ P
Sbjct:   19 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSES--LDTADPAVTGAKQGP 205          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB3A_HUMAN (Ras-related protein Rab-3A OS=Homo sapiens GN=RAB3A PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.156e-51
Identity = 94/189 (49.74%), Postives = 134/189 (70.90%), Query Frame = 1
Query:  187 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGKSPFMXNAXPXTVQIKRQP 753
            +DY+FK+L+IG+S VGK+  L R+ADDS+  +++ST+G+DFK++T+ ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W  +I  Y+ DN   LLVGNKCD+   +VVS E  +  AD +G  F E SAKD+ NV Q F  +   I ++M +S  +  A P     K+ P
Sbjct:   19 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSES--LDTADPAVTGAKQGP 205          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB3A_BOVIN (Ras-related protein Rab-3A OS=Bos taurus GN=RAB3A PE=1 SV=3)

HSP 1 Score: 201.83 bits (512), Expect = 4.156e-51
Identity = 94/189 (49.74%), Postives = 134/189 (70.90%), Query Frame = 1
Query:  187 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGKSPFMXNAXPXTVQIKRQP 753
            +DY+FK+L+IG+S VGK+  L R+ADDS+  +++ST+G+DFK++T+ ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W  +I  Y+ DN   LLVGNKCD+   +VVS E  +  AD +G  F E SAKD+ NV Q F  +   I ++M +S  +  A P     K+ P
Sbjct:   19 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSES--LDTADPAVTGAKQGP 205          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB3C_HUMAN (Ras-related protein Rab-3C OS=Homo sapiens GN=RAB3C PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.258e-51
Identity = 96/200 (48.00%), Postives = 139/200 (69.50%), Query Frame = 1
Query:  187 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGKS----PFMXNAXPXTVQIKRQPVAXKSGC 774
            +DY+FKLL+IG+S VGK+  L R+ADDS+  +++ST+G+DFK++TV ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W  +I  Y+ DN   +LVGNKCD+   +V+S E  +   +++G  F ETSAKD+ NV Q F  +   I D+M +S    P +  A   T ++K  P   +  C
Sbjct:   27 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNT-RLKETPPPPQPNC 225          
The following BLAST results are available for this feature:
BLAST of EY665123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB3_DROME6.411e-5251.74Ras-related protein Rab-3 OS=Drosophila melanogast... [more]
RAB10_DISOM6.411e-5256.65Ras-related protein Rab-10 OS=Discopyge ommata PE=... [more]
RABG2_DICDI3.182e-5158.24Ras-related protein RabG2 OS=Dictyostelium discoid... [more]
RAB3A_RAT4.156e-5149.74Ras-related protein Rab-3A OS=Rattus norvegicus GN... [more]
RAB3A_PIG4.156e-5149.74Ras-related protein Rab-3A OS=Sus scrofa GN=RAB3A ... [more]
RAB3A_MOUSE4.156e-5149.74Ras-related protein Rab-3A OS=Mus musculus GN=Rab3... [more]
RAB3A_MACFA4.156e-5149.74Ras-related protein Rab-3A OS=Macaca fascicularis ... [more]
RAB3A_HUMAN4.156e-5149.74Ras-related protein Rab-3A OS=Homo sapiens GN=RAB3... [more]
RAB3A_BOVIN4.156e-5149.74Ras-related protein Rab-3A OS=Bos taurus GN=RAB3A ... [more]
RAB3C_HUMAN9.258e-5148.00Ras-related protein Rab-3C OS=Homo sapiens GN=RAB3... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665123 ID=EY665123; Name=EY665123; organism=Citrus sinensis; type=EST; length=878bp
CCTTTGCTTGTCGTTTCAGTATTTTCTTTCTTTTTTTTCTTTTTTGTCTT
GTCTTCTGTTTTTGTTGACATTTAATTTCCCGGCGAAACTCATATCACGA
GATCTCGCCGAAGATAATAATCTGTTTTGGTTAACCGAACCCGAAGCTTT
TTTCTTTTACACAAATCTACGACGATGAATCCTGAATATGACTATCTGTT
TAAGCTTCTGCTTATTGGAGATTCCGGTGTTGGCAAATCTTGTCTTCTCT
TGAGATTTGCTGATGATTCATATATTGAGAGTTACATCAGCACCATAGGA
GTTGATTTTAAAATACGCACTGTTGAGCAAGATGGGAAGACCATTAAACT
TCAAATTTGGGATACTGCTGGTCAAGAAAGATTTAGGACAATCACCAGCA
GCTACTACCGTGGGGCACATGGTATCATAATTGTTTATGATGTGACAGAC
CAAGAGAGCTTCAATAATGTCAAGCAGTGGTTGAATGAAATTGACCGTTA
TGCTAGTGATAATGTCAACAAACTTCTGGTTGGAAACAAGTGTGATCTCA
CTGCAAATAAGGTTGTCTCGTACGAAACAGCCAAGGCATTTGCAGATGAA
ATTGGAATACCTTTCATGGAAACTAGTGCAAAAGATTCTACCAACGTGGG
ACAGGCATTCATGGCCATGGCTGCTTTCATCAAGGATAGAATGGGCAAGT
CACCATTCATGANCAATGCANGGCCTNCAACTGTACAGATCAAAAGGCAG
CCTGTTGCACANAAAAGTGGCTGCTGCTCTACTAAGTATCATTGGATANT
ATCTGCCNGGGGTCTGCTGGACCCAAGGGGGGGGAATGCTTTTATCTTTT
CAGTTGAAAGCTTTGTATCTGGACCAAC
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