EH406453

Overview
NameEH406453
Unique NameEH406453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length575
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EH406453 vs. ExPASy Swiss-Prot
Match: MDH_ECOK1 (Malate dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=mdh PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.201e-14
Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 1 
Query:    1 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 243
            VVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + LG+ G+EE  S+G L+ +E+  LE
Sbjct:  213 VVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALE 293
[Close]
BLAST of EH406453 vs. ExPASy Swiss-Prot
Match: MDH_ECOHS (Malate dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=mdh PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.201e-14
Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 1 
Query:    1 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 243
            VVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + LG+ G+EE  S+G L+ +E+  LE
Sbjct:  213 VVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALE 293
[Close]
BLAST of EH406453 vs. ExPASy Swiss-Prot
Match: MDH_ECODH (Malate dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=mdh PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.201e-14
Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 1 
Query:    1 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 243
            VVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + LG+ G+EE  S+G L+ +E+  LE
Sbjct:  213 VVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALE 293
[Close]
BLAST of EH406453 vs. ExPASy Swiss-Prot
Match: MDH_ECOBW (Malate dehydrogenase OS=Escherichia coli (strain K12 / BW2952) GN=mdh PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.201e-14
Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 1 
Query:    1 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 243
            VVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + LG+ G+EE  S+G L+ +E+  LE
Sbjct:  213 VVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALE 293
[Close]
BLAST of EH406453 vs. ExPASy Swiss-Prot
Match: MDH_ECO81 (Malate dehydrogenase OS=Escherichia coli O81 (strain ED1a) GN=mdh PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.201e-14
Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 1 
Query:    1 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 243
            VVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + LG+ G+EE  S+G L+ +E+  LE
Sbjct:  213 VVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALE 293
[Close]
BLAST of EH406453 vs. ExPASy Swiss-Prot
Match: MDH_ECO5E (Malate dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=mdh PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.201e-14
Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 1 
Query:    1 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 243
            VVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + LG+ G+EE  S+G L+ +E+  LE
Sbjct:  213 VVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALE 293
[Close]
BLAST of EH406453 vs. ExPASy Swiss-Prot
Match: MDH_ECO57 (Malate dehydrogenase OS=Escherichia coli O157:H7 GN=mdh PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.201e-14
Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 1 
Query:    1 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 243
            VVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + LG+ G+EE  S+G L+ +E+  LE
Sbjct:  213 VVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALE 293
[Close]
BLAST of EH406453 vs. ExPASy Swiss-Prot
Match: MDH_ECO45 (Malate dehydrogenase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=mdh PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.201e-14
Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 1 
Query:    1 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 243
            VVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + LG+ G+EE  S+G L+ +E+  LE
Sbjct:  213 VVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALE 293
[Close]
BLAST of EH406453 vs. ExPASy Swiss-Prot
Match: MDH_ECO27 (Malate dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=mdh PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.201e-14
Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 1 
Query:    1 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 243
            VVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + LG+ G+EE  S+G L+ +E+  LE
Sbjct:  213 VVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALE 293
[Close]
BLAST of EH406453 vs. ExPASy Swiss-Prot
Match: MDH_ECO24 (Malate dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=mdh PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.201e-14
Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 1 
Query:    1 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 243
            VVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + LG+ G+EE  S+G L+ +E+  LE
Sbjct:  213 VVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALE 293
The following BLAST results are available for this feature:
BLAST of EH406453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
MDH_ECOK14.201e-1449.38Malate dehydrogenase OS=Escherichia coli O1:K1 / A... [more]
MDH_ECOHS4.201e-1449.38Malate dehydrogenase OS=Escherichia coli O9:H4 (st... [more]
MDH_ECODH4.201e-1449.38Malate dehydrogenase OS=Escherichia coli (strain K... [more]
MDH_ECOBW4.201e-1449.38Malate dehydrogenase OS=Escherichia coli (strain K... [more]
MDH_ECO814.201e-1449.38Malate dehydrogenase OS=Escherichia coli O81 (stra... [more]
MDH_ECO5E4.201e-1449.38Malate dehydrogenase OS=Escherichia coli O157:H7 (... [more]
MDH_ECO574.201e-1449.38Malate dehydrogenase OS=Escherichia coli O157:H7 G... [more]
MDH_ECO454.201e-1449.38Malate dehydrogenase OS=Escherichia coli O45:K1 (s... [more]
MDH_ECO274.201e-1449.38Malate dehydrogenase OS=Escherichia coli O127:H6 (... [more]
MDH_ECO244.201e-1449.38Malate dehydrogenase OS=Escherichia coli O139:H28 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2AG05FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406453 ID=EH406453; Name=EH406453; organism=Citrus sinensis; type=EST; length=575bp
GTAGTTGAGGCAAAAACTGGAGCTGGTTCGGCCACTCTATCGATGGCATA
TGCTGCTGCCAAGTTTGCCGATGCTTGTCTCCGAGGCTTGAGGGGGGATG
CCGGTGTTATTGAGTGTGCATACGTGGCTTCTACGGTGACTGAACTCCCT
TTCTTTGCATCCAAGGTACGGCTTGGCCGTGCTGGAATTGAGGAAATTTA
CTCACTTGGCCCATTGAATGAGTATGAGAGGGCTGGTTTGGAAAGGCAAA
GAAAGAGTTAGCGGGAAGCATTCAGAAGGGAGTCAGTTTTGTCAGGAAAT
GAGTAACCAATCACATGGTGACTAATGATAATGGTTGTGCTTTTGTTGTT
TGCCTCAAATATCTCAAGATTACTTTCCCCAGAATAAGAGGTAGGGTTTT
CGTTTTTCCATAATCAGATTGAATTAAGTTAGTTACAAAGAAGAAGCAAA
AGATTCATCTTAGTGGGGTTGGTTTGGTTCTTTTGATATTCTTGTAATGA
AGGGATAAAGAATATGTAGATGACGAACTGCCGCCTGTTTTATCATTTTA
ATCAATTCAAAATCAGAGTTCATAC
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