EY665080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665080 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.874e-19 Identity = 63/157 (40.13%), Postives = 81/157 (51.59%), Query Frame = 3 Query: 252 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL---REVTDPLYPGGSFDPLGLADDPXAFAELKVKGIRMGG 713 PP YLTGE GD G+D AGL+ADP TF + + EV HCR +ML +GC+ PELL G WF QI+ + +D+ + A+ A QVV +E +R GG L E D YPG FDPL L + AE+K + M G Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL-------GNGAWF----QIWDK--VDF----------NRFAVVALQVV--APLEYWRGNGGFLWNDEETVDQSYPG--FDPLNLTTEYTKEAEIKNGRLAMNG 509 HSP 2 Score: 30.8018 bits (68), Expect = 5.874e-19 Identity = 14/30 (46.67%), Postives = 18/30 (60.00%), Query Frame = 2 Query: 701 QNGRVGYVSMFGFFRQAIVTGKGPVXNXAD 790 +NGR+ MFG Q+ VTGK P+ N D Sbjct: 501 KNGRLAMNGMFGLEVQSHVTGKSPINNLID 530 HSP 3 Score: 78.5666 bits (192), Expect = 3.013e-17 Identity = 53/151 (35.10%), Postives = 72/151 (47.68%), Query Frame = 3 Query: 243 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG--PLREVTDPLYPGGSFDPLGLADDPXAFAELK 689 + EPP+ LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PELL G+ WF+AG + L + + + E +R GG + D YPG FDPL L D AE+K Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELL-------GKGAWFEAGDSVDG------------------LKLGFITMAIAAPTEYWRGQGGFNWQKGELDRSYPG--FDPLNLTTDYTRAAEVK 316 HSP 4 Score: 31.187 bits (69), Expect = 3.013e-17 Identity = 12/39 (30.77%), Postives = 22/39 (56.41%), Query Frame = 2 Query: 701 QNGRVGYVSMFGFFRQAIVTGKGPVXNXADHWXDPVNNN 817 +NGR+ ++ G Q + TG+ P+ N + H +P+ N Sbjct: 316 KNGRLALTAVAGLTAQYLATGESPLANLSAHLANPIGAN 354 HSP 5 Score: 72.7886 bits (177), Expect = 5.393e-16 Identity = 52/148 (35.14%), Postives = 74/148 (50.00%), Query Frame = 3 Query: 255 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG-YRIAGGPLREVTDP--LYPGGSFDPLGLADDPXAFAELK 689 PS+L GE+ GD G+D AGL+ADP+TF + R EV H R AML +G + P+ L G+ +W++A I +V + A G + +A G ++E +DP +YPG FDPL L D AE+K Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYL-------GKGIWYEAAQN---------------------AGIGLKEVAIFTAAYGVFEVARG-VKENSDPTTIYPG--FDPLNLTTDYTKEAEIK 128 HSP 6 Score: 32.7278 bits (73), Expect = 5.393e-16 Identity = 14/39 (35.90%), Postives = 21/39 (53.85%), Query Frame = 2 Query: 701 QNGRVGYVSMFGFFRQAIVTGKGPVXNXADHWXDPVNNN 817 +NGR+ ++ GF Q V G P+ N A+H P+ N Sbjct: 128 KNGRLALTALLGFEVQRHVVGGSPLANLAEHLQQPLQRN 166
BLAST of EY665080 vs. ExPASy Swiss-Prot
Match: CB21_EUGGR (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.692e-17 Identity = 51/79 (64.56%), Postives = 56/79 (70.89%), Query Frame = 3 Query: 507 SLIHAQSILAIWACQVVLMGAVEGYRI---AGGPLREVTDPLYPGGSFDPLGLADDPXAFAELKVKGIRMGGWAMSPCL 734 +LIHA+S+LAI A QV+LMGAVEGYR A G E D LYPGG FDPLGLADDP F ELKVK I+ G AMS L Sbjct: 4 ALIHAKSLLAILATQVLLMGAVEGYRAGNTAPGQFGEDLDRLYPGGPFDPLGLADDPDTFPELKVKEIKNGRLAMSGML 82
BLAST of EY665080 vs. ExPASy Swiss-Prot
Match: CB4A_ARATH (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 2.640e-15 Identity = 69/230 (30.00%), Postives = 94/230 (40.87%), Query Frame = 3 Query: 165 RKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN--------------------------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLREVTDPLYPGGS-FDPLGLADDPXAFAELKVKGIRMGGWAM 722 +K+ K+V++ P + P + P +L G GDYG+D GL E AKN RE E+IH RWAML LG + E L GV W AG ++ G YLG P ++ IW +V+++G +E R A + LYPGG FDPLGLA DP A+L++ I+ AM Sbjct: 44 KKSAKKTVTTDRPLWYPGAIS---------PDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWL--TGV-----TWQDAG-KVELVDGSSYLGQPLPFSISTL--IW-IEVLVIGYIEFQRNAE---LDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAM 250 HSP 2 Score: 36.965 bits (84), Expect = 2.640e-15 Identity = 16/37 (43.24%), Postives = 23/37 (62.16%), Query Frame = 2 Query: 701 QNGRVGYVSMFGFFRQAIVTGKGPVXNXADHWXDPVN 811 ++ R+ V+ GF QA TGKGP+ N A H DP++ Sbjct: 244 KHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 280
BLAST of EY665080 vs. ExPASy Swiss-Prot
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 3.432e-15 Identity = 70/226 (30.97%), Postives = 91/226 (40.27%), Query Frame = 3 Query: 177 SKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN--------------------------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLREVTDPLYPGGS-FDPLGLADDPXAFAELKVKGIRMGGWAM 722 +K+V S P + P + P YL G GDYG+D GL E AKN RE E+IH RWAML LG + E L GV W AG ++ G YLG P ++ IW +V+++G +E R A + LYPGG FDPLGLA DP A+L++ I+ AM Sbjct: 45 AKTVISDRPLWFP---------GAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWL--TGV-----TWQDAG-KVELVDGSSYLGQPLPFSISTL--IW-IEVLVIGYIEFQRNAE---LDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAM 247 HSP 2 Score: 36.5798 bits (83), Expect = 3.432e-15 Identity = 16/37 (43.24%), Postives = 22/37 (59.46%), Query Frame = 2 Query: 701 QNGRVGYVSMFGFFRQAIVTGKGPVXNXADHWXDPVN 811 ++ R+ V GF QA TGKGP+ N A H DP++ Sbjct: 241 KHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLH 277
BLAST of EY665080 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 3.448e-15 Identity = 50/168 (29.76%), Postives = 73/168 (43.45%), Query Frame = 3 Query: 255 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLREVTDPL------------YPGGSFDPLGLADDPXAFAELKVKGIRMGGWAM 722 P YLTG PGD G+D GL+ DPE + E+++ RWAMLG G + PE+ G+ W+ AG + + + + +L + IL+ + + ++ P DP+ YPGG F+PL A E K K I G AM Sbjct: 63 PGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGI-INVPKWYAAGKEEY------FASSSTLFVIEFILSHYV-------EIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFAPT----LEAKEKEIANGRLAM 212 HSP 2 Score: 36.965 bits (84), Expect = 3.448e-15 Identity = 17/37 (45.95%), Postives = 21/37 (56.76%), Query Frame = 2 Query: 704 NGRVGYVSMFGFFRQAIVTGKGPVXNXADHWXDPVNN 814 NGR+ ++ GF Q VTGKGP N H DP +N Sbjct: 207 NGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHN 243
BLAST of EY665080 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 9.832e-15 Identity = 53/160 (33.12%), Postives = 73/160 (45.62%), Query Frame = 3 Query: 255 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG-AQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG---YRIAGGPLREVTDPLYPGGSFDPLGLADDPXAFAELKVKGIRMGGWAM 722 P YLTG GD G+D GL+ DPE + E+++ RWAMLG G + PE+ + G+ W+ AG Q F+ ++ L H I W + G+V ++ P EV YPGG F+PL A E K K + G AM Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI-INVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPKGEVG---YPGGIFNPLNFAPT----QEAKEKELANGRLAM 213 HSP 2 Score: 36.965 bits (84), Expect = 9.832e-15 Identity = 17/37 (45.95%), Postives = 21/37 (56.76%), Query Frame = 2 Query: 704 NGRVGYVSMFGFFRQAIVTGKGPVXNXADHWXDPVNN 814 NGR+ ++ GF Q VTGKGP N H DP +N Sbjct: 208 NGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHN 244
BLAST of EY665080 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.313e-13 Identity = 75/231 (32.47%), Postives = 103/231 (44.59%), Query Frame = 3 Query: 147 GGRISMRKTGSKSV---SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP----------------LREVTDPLYPGGS-FDPLGLADDPXAFAELKVKGIRMGGWAMSPCLVSFVRPL 755 G RIS T S ++ +P + L S + SYL G PGD+G+D GLS DPE F + + L EVI+ R+AMLGA G + PE+L + G+ E WF+ G I G +Y + ++ ++ LMG E R L DP YPGG F+PLG D + ELK+K I+ G AM L F++ L Sbjct: 24 GSRISQSVTRKASFVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADN--------YTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQAL 244
BLAST of EY665080 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.255e-12 Identity = 65/190 (34.21%), Postives = 92/190 (48.42%), Query Frame = 3 Query: 258 SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI----------WA-----CQVVLMGAVEGYRIAGGPLREVTDPLYPGGS-FDPLGLADDPXAFAELKVKGIRMGGWAMSPCLVSFVRPL 755 SYL G PGDYG+D GLS DPE F + R L EVI+ R+AMLGA+G + PE L + G+ E WF+ G I G +Y + + + + WA + +G +G+ +G +P YPGG F+PLG D + ELK+K ++ G AM L F++ L Sbjct: 66 SYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGV-IPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSG-------NPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGL 246 The following BLAST results are available for this feature:
BLAST of EY665080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665080 ID=EY665080; Name=EY665080; organism=Citrus sinensis; type=EST; length=859bpback to top |