EH406444

Overview
NameEH406444
Unique NameEH406444
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length447
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EH406444 vs. ExPASy Swiss-Prot
Match: GRC11_ARATH (Glutaredoxin-C11 OS=Arabidopsis thaliana GN=GRXC11 PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.853e-11
Identity = 33/101 (32.67%), Postives = 59/101 (58.42%), Query Frame = 3 
Query:   30 LPKAQETVSSNSVVVFSKTFCPFCVSVKELFQQLGVTFKAIELNKESDGSDIQSAL-AEWTGQKTVPNVFIGGKHIGGCDSTTALHREGKLVPLLTEAGAV 329
            + + ++  S  + V+F+K+ C  C S+K LF +LG +    EL+K+ +G +++ AL A  +    VP VF+GG++IG      + H +G L  +L +A A+
Sbjct:    1 MERIRDLSSKKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPEGREMERALRALGSSNPAVPAVFVGGRYIGSAKDIISFHVDGSLKQMLKDAKAI 101
The following BLAST results are available for this feature:
BLAST of EH406444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
GRC11_ARATH8.853e-1132.67Glutaredoxin-C11 OS=Arabidopsis thaliana GN=GRXC11... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK1DD12FM2 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406444 ID=EH406444; Name=EH406444; organism=Citrus sinensis; type=EST; length=447bp
TCAAAGACAAAGAAGACACAGAAATGGCTTTGCCCAAGGCCCAGGAAACC
GTTTCCTCCAATTCCGTCGTCGTTTTCAGCAAAACGTTTTGTCCGTTCTG
CGTGAGTGTCAAAGAGCTGTTTCAGCAACTCGGAGTCACTTTCAAGGCCA
TTGAACTGAACAAAGAAAGTGATGGAAGTGACATTCAATCAGCTCTAGCT
GAGTGGACTGGACAGAAAACTGTTCCAAATGTCTTCATCGGAGGGAAACA
CATTGGTGGCTGCGATTCAACTACTGCACTGCACAGGGAAGGGAAGCTGG
TTCCTCTGCTCACTGAAGCTGGAGCTGTTGCCAAGACAGCTGCCTGATGG
ATGGCTATTGTCTGCCTGTTAATTCTAGTAATAAATAAAGAATGTGTTGG
TAGTGCTTAATCTGTCTGAATTAAACATGAAATTATGCTTATTTGAG
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