EY665051

Overview
NameEY665051
Unique NameEY665051
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665051 vs. ExPASy Swiss-Prot
Match: LCF1_YEAST (Long-chain-fatty-acid--CoA ligase 1 OS=Saccharomyces cerevisiae GN=FAA1 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.528e-21
Identity = 61/194 (31.44%), Postives = 101/194 (52.06%), Query Frame = 3
Query:   45 YSWDEFLQLGENK--QFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGF------WRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKNGHIHVEASPIADIIVFDMVKQSFGG 602
            +S+D+ L+LG+    + D+    K+D+C IMYTSG+TG+PKGV++ + N+V  + G      +V + + + D  + +LPLAHIF+   E +    GA IG+          V+    D+ E KPTI   V  V + +  G+  +I +   L K +F  AY+ K   L    +H+        +VF  ++ + GG
Sbjct:  238 FSFDDILKLGKESCNEIDVHPPGKDDLCCIMYTSGSTGEPKGVVLKHSNVVAGVGGASL---NVLKFVGNTDRVICFLPLAHIFELVFELLSFYWGACIGYATVKTLTSSSVRNCQGDLQEFKPTIMVGVAAVWETVRKGILNQIDNLPFLTKKIFWTAYNTK---LNMQRLHIPGGGALGNLVFKKIRTATGG 425          

HSP 2 Score: 28.1054 bits (61), Expect = 1.528e-21
Identity = 24/76 (31.58%), Postives = 33/76 (43.42%), Query Frame = 2
Query:  686 VLEGYGLTENCARDFCVTAK*XGNDWELGGLQYQMG--DGWLESVPERGYDALSSTHVGKFWVKGDYCVFRYFKRE 907
            +L GYGLTE CA    +       ++ELG      G     L  V E GY   +  + G+ W+ G      Y+K E
Sbjct:  452 MLIGYGLTETCASTTILDPA----NFELGVAGDLTGCVTVKLVDVEELGY--FAKNNQGEVWITGANVTPEYYKNE 521          
BLAST of EY665051 vs. ExPASy Swiss-Prot
Match: LCFH_HAEIN (Putative long-chain-fatty-acid--CoA ligase OS=Haemophilus influenzae GN=HI0002 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.122e-21
Identity = 59/197 (29.95%), Postives = 108/197 (54.82%), Query Frame = 3
Query:   48 SWDEFLQLGENKQFD-----LPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFN--IAYSYKFHNLKNGHIHV-----EASPIADIIVFDMVKQSFGG 602
            +W+ F++ G N Q D     L  K+ +D+ TI+YTSGTTG+PKGVM+   N+   +         ++  +T +D+ +S+LP +HIF+RA     +  GA + +   D   +   + E++PT+ CAVPR  ++IY+ +  K+     L++ +F+  I+   K+ +L+  +  +     +   +AD +V   ++Q  GG
Sbjct:  159 TWESFIKTGSNAQQDELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLAHQLE-----THDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLE-DTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFHWAISVGQKYFDLRANNKAIPFLLKKQFALADKLVLSKLRQLLGG 349          
BLAST of EY665051 vs. ExPASy Swiss-Prot
Match: LCF1_SCHPO (Long-chain-fatty-acid--CoA ligase 1 OS=Schizosaccharomyces pombe GN=lcf1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.026e-19
Identity = 57/178 (32.02%), Postives = 103/178 (57.87%), Query Frame = 3
Query:  114 DICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLE--------DIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKNGHIHVEASPIADIIVFDMVKQSFGGACTAYSV 623
            +IC IMYTSG+TG PKGV++S++N+V  +  +   ++ V E +TS+D  ++YLPLAHI + A E + ++ G  IG+   +V+ L++        DI   +PTI   VP V + +  G+  K+++   +K+++F  AY  K   +++   ++  S + D  VF+ ++    G    Y++
Sbjct:  240 EICCIMYTSGSTGLPKGVILSHKNMVAIVTAI---VKHVPE-VTSKDYLLAYLPLAHILEFAFENICLAWGGTIGY--ANVRTLVDTNCRNCKGDINTFRPTIMVGVPAVWEMVRKGIMSKLNAASAVKRSVFWTAYYTKAKLMRH---NLPGSCVLDTAVFNKIRSMGTGGRLRYTL 408          

HSP 2 Score: 23.483 bits (49), Expect = 1.026e-19
Identity = 12/30 (40.00%), Postives = 18/30 (60.00%), Query Frame = 1
Query:  601 GRVRLILSGAAPLTXHVETFLAGGGMCLCP 690
            GR+R  LSG + L+   + FL+   + LCP
Sbjct:  402 GRLRYTLSGGSALSPDTKRFLS---IVLCP 428          
BLAST of EY665051 vs. ExPASy Swiss-Prot
Match: ACBG2_CHICK (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Gallus gallus GN=ACSBG2 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.694e-18
Identity = 70/217 (32.26%), Postives = 115/217 (53.00%), Query Frame = 3
Query:    3 LSIGKRLRSMVSAVYSWDEFLQLGENKQFDLP---------VKKKNDICTIMYTSGTTGDPKGVMVSNENI--VTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIE-EVFISNGAAIGFWRGDV--KLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFH-NLK--NGHIHVEAS-PIADIIVFDMVKQSFG 599
            +  G+ L+      YSW EFL LGE    D+P          +K N  CT++YTSGTTG PKGVM+S++N+   +  AG   +L    EK   +++ VSYLPL+H+  + I+  + ++ G  + F + D     L++ + E++PT F  VPRV ++I   +    +    L++ + + A       NLK  NGH  V  +  +A  +V+  V+++ G
Sbjct:  232 IQYGEELKEKRPNQYSWREFLDLGE----DIPDSQLREIIESQKPNQCCTLIYTSGTTGQPKGVMLSHDNLTWTSIAAGRSLMLLEATEK---QELVVSYLPLSHVAAQMIDIWLPVTFGGQVFFAQPDALKGTLVDTLREVRPTAFLGVPRVWEKIEEKMKSVGAKSSTLRRKVASWAKGVGLQTNLKWMNGHSEVPMNFRLARQLVYKKVRKAIG 441          
BLAST of EY665051 vs. ExPASy Swiss-Prot
Match: ACBG2_HUMAN (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Homo sapiens GN=ACSBG2 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.434e-17
Identity = 68/199 (34.17%), Postives = 109/199 (54.77%), Query Frame = 3
Query:   42 VYSWDEFLQLGEN---KQFDLPVK--KKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSE-DVYVSYLPLAHIFDRAIE-EVFISNGAAIGFWRGDV--KLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLF----NIAYSYKFHNLKNGHIHVEASPIADIIVFDMVKQSFG 599
            +YSWD+F++LG +    Q +  ++  K N    ++YTSGTTG PKGVM+S++NI T+IAG      + + KLT + +  VSYLPL+HI  + ++  V I  GA   F + D     L+  + E+KPT+F  VP++ ++I+  + +  +    LKK  F    NI +      +   +    +  +A  +VF  VK S G
Sbjct:  194 LYSWDDFMELGRSIPDTQLEQVIESQKANQCAVLIYTSGTTGIPKGVMLSHDNI-TWIAGA----VTKDFKLTDKHETVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKPTVFIGVPQIWEKIHEMVKKNSAKSMGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLG 387          
BLAST of EY665051 vs. ExPASy Swiss-Prot
Match: ACBG2_MOUSE (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Mus musculus GN=Acsbg2 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.445e-17
Identity = 56/164 (34.15%), Postives = 92/164 (56.10%), Query Frame = 3
Query:   21 LRSMVSAVYSWDEFLQLGE---NKQFDLPV--KKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIE-EVFISNGAAIGFWRGDV--KLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLF 488
            L   ++ +YSW++F++LG    N Q D  +  +K N    I+YTSGTTG PKGV++S++NI T+ AG       +N     ++  VSYLPL+HI  +  +  + I  GA   F + D     L+  + E+KPT+F  VPR+ +++   + + ++    L+K  F
Sbjct:  184 LMESMANLYSWNDFMELGNDIPNIQLDRVILSQKANQCAVILYTSGTTGTPKGVLLSHDNI-TWTAGAMSQEMEINRVSGKQNTIVSYLPLSHIAAQLTDIWIPIKIGALTFFAQPDALRGTLVYTLQEVKPTLFMGVPRIWEKMQDTIKENVARSSRLRKKAF 346          
BLAST of EY665051 vs. ExPASy Swiss-Prot
Match: ACBG2_XENLA (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Xenopus laevis GN=acsbg2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.171e-17
Identity = 66/198 (33.33%), Postives = 106/198 (53.54%), Query Frame = 3
Query:   42 VYSWDEFLQLGEN---KQFD--LPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIE-EVFISNGAAIGFWRGDV--KLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFH-NLK--NGHI-HVEASPIADIIVFDMVKQSFG 599
            +Y+W EF+QLG++    Q D  +  +K N  CT++YTSGTTG PKGVM+S++NI T+ A        + E    +++ VSYLPL+HI  + I+  + +  G A  F + D     L   + E++PT F  VPRV +++   +    +    +K+ +   A       NLK  NG   H     +A+ +VF  V+++ G
Sbjct:  251 LYTWKEFMQLGKDIPDSQLDQIISSQKPNQCCTLIYTSGTTGQPKGVMLSHDNI-TWTAAAAGKTVRLREATDLQEIVVSYLPLSHIAAQMIDIWLTMKYGGATYFAQPDALKGSLAITLREVRPTAFMGVPRVWEKMQEKMKAVGAKSSTIKRKMATWAKGVGLETNLKKMNGSTPHPMKYHVANKLVFKKVRKALG 447          
BLAST of EY665051 vs. ExPASy Swiss-Prot
Match: LCF4_YEAST (Long-chain-fatty-acid--CoA ligase 4 OS=Saccharomyces cerevisiae GN=FAA4 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.704e-16
Identity = 64/198 (32.32%), Postives = 102/198 (51.52%), Query Frame = 3
Query:   42 VYSWDEFLQLGENK--QFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIE-EVFISNGAAIGFWRGDVKLLLE--------DIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKNGHIHVEASPIADIIVFDMVKQSFGG 602
            +YS+DE +++G+    + +L   K  D   IMYTSG+TG PKGV++++ NIV  I GV     +V   +   D  +++LPLAHIF+   E E F  NG  +G+   +VK L          D+ E KPT+   V  V + +  G+  KI+      +TLF   Y+ K  N       +  S +   ++F  ++++ GG
Sbjct:  237 IYSFDEIIEIGKKAKDEVELHFPKPEDPACIMYTSGSTGTPKGVVLTHYNIVAGIGGVG---HNVIGWIGPTDRIIAFLPLAHIFELTFEFEAFYWNG-ILGY--ANVKTLTPTSTRNCQGDLMEFKPTVMVGVAAVWETVRKGILAKINELPGWSQTLFWTVYALKERN-------IPCSGLLSGLIFKRIREATGG 421          
BLAST of EY665051 vs. ExPASy Swiss-Prot
Match: ACBG2_RAT (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Rattus norvegicus GN=Acsbg2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.531e-16
Identity = 56/157 (35.67%), Postives = 86/157 (54.78%), Query Frame = 3
Query:   42 VYSWDEFLQLGE---NKQFDLPV--KKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIE-EVFISNGAAIGFWRGDV--KLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLF 488
            +YSW +F++LG    N Q D  +  +K N    I+YTSGTTG PKGVM+S++NI T+ AG       +      +D  VSYLPL+HI  + ++  + I  G    F + D     L+  + E+KPT F  VPRV +++   + + ++    L+K  F
Sbjct:  191 LYSWQDFMELGNAIPNIQLDRVILSQKANQCAVIIYTSGTTGSPKGVMLSHDNI-TWTAGAMAREIELIHVSGKQDTIVSYLPLSHIAAQLMDIWIPIKVGVLTFFAQPDALRGTLVYTLQEVKPTYFLGVPRVWEKMQDTIKENVAKSSNLRKKAF 346          
BLAST of EY665051 vs. ExPASy Swiss-Prot
Match: LCF3_YEAST (Long-chain-fatty-acid--CoA ligase 3 OS=Saccharomyces cerevisiae GN=FAA3 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.289e-15
Identity = 66/198 (33.33%), Postives = 105/198 (53.03%), Query Frame = 3
Query:   42 VYSWDEFLQLGENKQFDLPVK--KKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIE-EVFISNGAAIGFWRGDVKLLLE--------DIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKNGHIHVEASPIADIIVFDMVKQSFGG 602
            +YS++E +++G+  + ++ +   +  D+  IMYTSG+   PKGV++++ NIV+ IAGV     +V   + S D  +S+LPLAHIF+   E E F  NG  +G+  G VK L          D+ E KPTI   V  V + +   + +KIS    + + +F  AYS K  +       V  +     +VF  V+Q+ GG
Sbjct:  237 IYSFEEVVKIGKKSKDEVKLHPPEPKDLACIMYTSGSISAPKGVVLTHYNIVSGIAGVG---HNVFGWIGSTDRVLSFLPLAHIFELVFEFEAFYWNG-ILGY--GSVKTLTNTSTRNCKGDLVEFKPTIMIGVAAVWETVRKAILEKISDLTPVLQKIFWSAYSMKEKS-------VPCTGFLSRMVFKKVRQATGG 421          
The following BLAST results are available for this feature:
BLAST of EY665051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
LCF1_YEAST1.528e-2131.44Long-chain-fatty-acid--CoA ligase 1 OS=Saccharomyc... [more]
LCFH_HAEIN8.122e-2129.95Putative long-chain-fatty-acid--CoA ligase OS=Haem... [more]
LCF1_SCHPO1.026e-1932.02Long-chain-fatty-acid--CoA ligase 1 OS=Schizosacch... [more]
ACBG2_CHICK1.694e-1832.26Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Gallus... [more]
ACBG2_HUMAN1.434e-1734.17Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Homo s... [more]
ACBG2_MOUSE2.445e-1734.15Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Mus mu... [more]
ACBG2_XENLA4.171e-1733.33Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Xenopu... [more]
LCF4_YEAST2.704e-1632.32Long-chain-fatty-acid--CoA ligase 4 OS=Saccharomyc... [more]
ACBG2_RAT3.531e-1635.67Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Rattus... [more]
LCF3_YEAST2.289e-1533.33Long-chain-fatty-acid--CoA ligase 3 OS=Saccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-E01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665051 ID=EY665051; Name=EY665051; organism=Citrus sinensis; type=EST; length=913bp
ACCTGAGCATAGGGAAGAGATTGAGAAGTATGGTTTCGGCTGTATATTCG
TGGGACGAATTTTTGCAACTGGGAGAGAATAAACAATTTGATCTACCTGT
GAAAAAGAAAAATGACATCTGTACAATTATGTATACTAGTGGAACAACTG
GTGATCCAAAGGGAGTGATGGTTTCAAATGAGAACATTGTTACTTTTATA
GCTGGAGTGAAATGCCTTTTGGAGAGTGTGAATGAGAAGTTAACTTCGGA
GGATGTATATGTTTCTTATCTTCCTCTTGCGCATATTTTTGACCGGGCAA
TTGAGGAAGTTTTCATATCCAATGGTGCTGCTATAGGGTTCTGGCGTGGG
GATGTCAAATTATTGCTTGAAGACATCGGAGAGCTCAAACCAACTATTTT
CTGTGCTGTTCCTCGTGTACTAGACAGAATATACTCGGGTTTGAATCAGA
AGATTTCTTCAGGCGGCTTATTAAAAAAGACATTATTTAATATTGCATAC
TCATATAAATTCCATAACTTGAAGAATGGGCATATACATGTCGAGGCATC
CCCTATTGCTGACATAATAGTATTTGACATGGTAAAGCAATCATTTGGTG
GGGCGTGTACGGCTTATTCTGTCTGGAGCAGCACCCCTTACTNCTCATGT
AGAAACCTTCCTGGCGGGTGGTGGCATGTGCTTATGTCCTGGAGGGATAT
GGTCTGACTGAAAACTGTGCCCGGGACTTTTGTGTCACTGCCAAATGANA
TGGCAATGATTGGGAACTGGGGGGCCTCCAGTACCAAATGGGGGATGGAT
GGCTAGAATCTGTTCCTGAAAGGGGATATGATGCCCTCTCAAGTACACAC
GTGGGAAAATTTTGGGTGAAGGGGGATTACTGTGTTTTCAGGTACTTTAA
ACGTGAGACCTAC
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