EH406435

Overview
NameEH406435
Unique NameEH406435
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length556
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EH406435 vs. ExPASy Swiss-Prot
Match: TPIS_TAESO (Triosephosphate isomerase OS=Taenia solium PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.087e-31
Identity = 65/104 (62.50%), Postives = 79/104 (75.96%), Query Frame = 1
Query:   13 QTKAIAEKISN---WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 315
            Q  AIA+ + +   WD VV+AYEPVWAIGTGK ATPAQAQEVH  +R W++ +V A +A   RI+YGGSV  +N K+L  QPDVDGFLVGGASLKP+FI II +
Sbjct:  145 QMDAIAKNVPSKEAWDKVVIAYEPVWAIGTGKTATPAQAQEVHKVVRDWIRKHVDAGIADKVRILYGGSVTASNAKDLGTQPDVDGFLVGGASLKPDFITIINA 248          
BLAST of EH406435 vs. ExPASy Swiss-Prot
Match: TPIS_PLAFA (Triosephosphate isomerase OS=Plasmodium falciparum GN=TPI PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.561e-31
Identity = 65/106 (61.32%), Postives = 77/106 (72.64%), Query Frame = 1
Query:    1 VVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSA 318
            V+ +Q KA  + I N+DNV+LAYEP+WAIGTGK ATP QAQ VH E+RK +KD    + A   RI+YGGSVN  NC  L  Q D+DGFLVG ASLK  F+DIIKSA
Sbjct:  142 VITKQVKAFVDLIDNFDNVILAYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKESFVDIIKSA 247          
BLAST of EH406435 vs. ExPASy Swiss-Prot
Match: TPIS_PLAF7 (Triosephosphate isomerase OS=Plasmodium falciparum (isolate 3D7) GN=TPI PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.561e-31
Identity = 65/106 (61.32%), Postives = 77/106 (72.64%), Query Frame = 1
Query:    1 VVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSA 318
            V+ +Q KA  + I N+DNV+LAYEP+WAIGTGK ATP QAQ VH E+RK +KD    + A   RI+YGGSVN  NC  L  Q D+DGFLVG ASLK  F+DIIKSA
Sbjct:  142 VITKQVKAFVDLIDNFDNVILAYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKESFVDIIKSA 247          
BLAST of EH406435 vs. ExPASy Swiss-Prot
Match: TPIS_DEBHA (Triosephosphate isomerase OS=Debaryomyces hansenii GN=TPI1 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 7.932e-31
Identity = 63/105 (60.00%), Postives = 76/105 (72.38%), Query Frame = 1
Query:    1 VVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 315
            V A Q  A+A  +S+W  +V+AYEPVWAIGTG  ATP  AQE H  +R+ L  ++ A+ A  TRI+YGGSVNG N  E   + DVDGFLVGGASLKPEF+DIIKS
Sbjct:  142 VCARQLDAVARVVSDWSKIVVAYEPVWAIGTGLAATPEDAQETHKAIREHLSKSIGADAAEKTRILYGGSVNGKNAPEFKDKADVDGFLVGGASLKPEFVDIIKS 246          
BLAST of EH406435 vs. ExPASy Swiss-Prot
Match: TPIS_ZYGBA (Triosephosphate isomerase OS=Zygosaccharomyces bailii GN=TPI1 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.353e-30
Identity = 61/105 (58.10%), Postives = 76/105 (72.38%), Query Frame = 1
Query:    1 VVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 315
            VV  Q +A+ +K+ +W NVV+AYEPVWAIGTG  ATP  AQE+H  +R++L   +  + A  TRI+YGGS NG N      +PDVDGFLVGGASLKPEF+DII S
Sbjct:  142 VVERQLQAVIDKVKDWSNVVIAYEPVWAIGTGLAATPEDAQEIHHSIREFLAKKLGEKTAQETRILYGGSANGKNAVTFKDKPDVDGFLVGGASLKPEFVDIINS 246          
BLAST of EH406435 vs. ExPASy Swiss-Prot
Match: TPIS_CANAL (Triosephosphate isomerase OS=Candida albicans GN=TPI1 PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 3.014e-30
Identity = 62/105 (59.05%), Postives = 78/105 (74.29%), Query Frame = 1
Query:    1 VVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 315
            V A Q  A+++ +S+W N+V+AYEPVWAIGTG  ATP  A+E H  +R  L  ++ AE A  TRI+YGGSVNG N K+   + +VDGFLVGGASLKPEF+DIIKS
Sbjct:  142 VCARQLDAVSKIVSDWSNIVVAYEPVWAIGTGLAATPEDAEETHKGIRAHLAKSIGAEQAEKTRILYGGSVNGKNAKDFKDKANVDGFLVGGASLKPEFVDIIKS 246          
BLAST of EH406435 vs. ExPASy Swiss-Prot
Match: TPIS_TRYCR (Triosephosphate isomerase, glycosomal OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.937e-30
Identity = 62/107 (57.94%), Postives = 80/107 (74.77%), Query Frame = 1
Query:    1 VVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 315
            VV  Q  A+A+K+S   W  VV+AYEPVWAIGTGKVATP QAQEVH  LR+W++  +  ++AA  RI+YGGSV   N + L    D++GFLVGGASLKPEF++II++
Sbjct:  143 VVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQMRDINGFLVGGASLKPEFVEIIEA 249          
BLAST of EH406435 vs. ExPASy Swiss-Prot
Match: TPI2_GIALA (Triosephosphate isomerase OS=Giardia lamblia PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.937e-30
Identity = 62/97 (63.92%), Postives = 73/97 (75.26%), Query Frame = 1
Query:   19 KAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDII 309
            K I E    W+NVV+AYEPVW+IGTG VATP QA+EVH  LRKW  + V AE A   RIIYGGS NG+NC++L   P++DGFLVGGASLKPEF  +I
Sbjct:  153 KEIGESKKLWENVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFAEKVCAEGAQHIRIIYGGSANGSNCEKLGQCPNIDGFLVGGASLKPEFTTMI 249          
BLAST of EH406435 vs. ExPASy Swiss-Prot
Match: TPIS_YEAST (Triosephosphate isomerase OS=Saccharomyces cerevisiae GN=TPI1 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 8.770e-30
Identity = 60/105 (57.14%), Postives = 76/105 (72.38%), Query Frame = 1
Query:    1 VVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 315
            VV  Q  A+ E++ +W NVV+AYEPVWAIGTG  ATP  AQ++HA +RK+L   +  + A+  RI+YGGS NG+N      + DVDGFLVGGASLKPEF+DII S
Sbjct:  142 VVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLKPEFVDIINS 246          
BLAST of EH406435 vs. ExPASy Swiss-Prot
Match: TPIS_CAEEL (Triosephosphate isomerase OS=Caenorhabditis elegans GN=tpi-1 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 8.770e-30
Identity = 62/101 (61.39%), Postives = 78/101 (77.23%), Query Frame = 1
Query:   13 QTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 315
            Q +AI +K  +W+N+V+AYEPVWAIGTGK A+  QAQEVH  +R +LK+ VS  VA +TRIIYGGSV   N  EL  +PD+DGFLVGGASLKP+F+ II +
Sbjct:  145 QLQAIVDKGVSWENIVIAYEPVWAIGTGKTASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFLVGGASLKPDFVKIINA 245          
The following BLAST results are available for this feature:
BLAST of EH406435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_TAESO2.087e-3162.50Triosephosphate isomerase OS=Taenia solium PE=2 SV... [more]
TPIS_PLAFA3.561e-3161.32Triosephosphate isomerase OS=Plasmodium falciparum... [more]
TPIS_PLAF73.561e-3161.32Triosephosphate isomerase OS=Plasmodium falciparum... [more]
TPIS_DEBHA7.932e-3160.00Triosephosphate isomerase OS=Debaryomyces hansenii... [more]
TPIS_ZYGBA1.353e-3058.10Triosephosphate isomerase OS=Zygosaccharomyces bai... [more]
TPIS_CANAL3.014e-3059.05Triosephosphate isomerase OS=Candida albicans GN=T... [more]
TPIS_TRYCR3.937e-3057.94Triosephosphate isomerase, glycosomal OS=Trypanoso... [more]
TPI2_GIALA3.937e-3063.92Triosephosphate isomerase OS=Giardia lamblia PE=3 ... [more]
TPIS_YEAST8.770e-3057.14Triosephosphate isomerase OS=Saccharomyces cerevis... [more]
TPIS_CAEEL8.770e-3061.39Triosephosphate isomerase OS=Caenorhabditis elegan... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK1DC12FM2 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406435 ID=EH406435; Name=EH406435; organism=Citrus sinensis; type=EST; length=556bp
GTTGTGGCTGAACAAACAAAAGCAATCGCAGAAAAAATATCCAACTGGGA
CAATGTTGTGTTGGCTTATGAGCCAGTTTGGGCCATTGGTACCGGGAAGG
TTGCAACCCCTGCTCAGGCTCAGGAAGTCCATGCTGAACTGAGGAAATGG
CTTAAAGACAATGTCAGTGCTGAAGTTGCAGCATCAACTAGAATCATCTA
CGGAGGTTCTGTAAATGGAGCAAATTGCAAAGAATTGGCAGCACAACCTG
ATGTGGATGGATTTTTGGTTGGTGGAGCTTCTCTAAAGCCGGAGTTCATC
GATATTATCAAGTCTGCCACAGTGAAGAAGAATTGAAGTTAAAGACCAAG
CTACTCGGCTTGCTGATGCCTGCAGTTTTCTCTGTTATGCGTTCTGGAAA
CTAGCGTTGTAATTTTTGTGGTCTGTTAAGTGTTACCAACGCCTTTCCAG
TATAATAAGTTAAATCTTCAGAATTCTTAAGAATCTCTTTCCTATTTCAG
TGGGGATTTGAAACTTATCATTGTGGATTTAATAAATGGTTGCTTTTCCC
TTCTTG
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