EH406435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH406435 vs. ExPASy Swiss-Prot
Match: TPIS_HELVI (Triosephosphate isomerase (Fragment) OS=Heliothis virescens GN=Tpi PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.504e-26 Identity = 59/87 (67.82%), Postives = 66/87 (75.86%), Query Frame = 1 Query: 1 VVAEQTKAIAEKI-SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVD 258 VV QTKA+ I +NW NVVLAYEPVWAIGTGK A+P QAQ+VHA LR WL N S +VAAS RI YGGSV AN KEL+A PD+D Sbjct: 129 VVFRQTKALLPAIGNNWANVVLAYEPVWAIGTGKTASPQQAQDVHASLRNWLSSNASPDVAASVRIQYGGSVTAANAKELSAFPDID 215
BLAST of EH406435 vs. ExPASy Swiss-Prot
Match: TPIS_CHLT3 (Triosephosphate isomerase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=tpiA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.216e-24 Identity = 58/90 (64.44%), Postives = 67/90 (74.44%), Query Frame = 1 Query: 52 NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 318 +VV+AYEPVWAIGTGK ATP QAQEVHA +R +KD EVA RI YGGSV +N KEL PD+DG L+GGASL E F++IIKSA Sbjct: 162 SVVIAYEPVWAIGTGKTATPEQAQEVHAFIRGIVKDMFGEEVANELRIQYGGSVKTSNAKELFGMPDIDGGLIGGASLNAEDFVEIIKSA 251
BLAST of EH406435 vs. ExPASy Swiss-Prot
Match: TPIS_PSYIN (Triosephosphate isomerase OS=Psychromonas ingrahamii (strain 37) GN=tpiA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.191e-24 Identity = 61/109 (55.96%), Postives = 77/109 (70.64%), Query Frame = 1 Query: 1 VVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGAS-LKPEFIDIIKSA 318 VV Q KA+ + I +N V+AYEPVWAIGTGKVA+ QAQ+VHA +R WL + S VAA +I+YGGSV ++ KEL AQPD+DG LVGGA+ L EF+ II+ A Sbjct: 142 VVETQLKAVIDVSGIDALENAVIAYEPVWAIGTGKVASSEQAQDVHAHIRTWLAEQ-SKVVAAKVQILYGGSVKASSAKELFAQPDIDGGLVGGAALLVEEFVGIIEGA 249
BLAST of EH406435 vs. ExPASy Swiss-Prot
Match: TPIS_JANMA (Triosephosphate isomerase OS=Janthinobacterium sp. (strain Marseille) GN=tpiA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.087e-23 Identity = 60/109 (55.05%), Postives = 75/109 (68.81%), Query Frame = 1 Query: 1 VVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 318 VVAEQ + I+ D +V+AYEPVWAIGTGK ATPA AQEVHA LRK L+ +AE A RI+YGGS+ N KEL A D+DG L+GGA+LK +F+ I+ +A Sbjct: 141 VVAEQLNVVLASIAASDLAKIVVAYEPVWAIGTGKTATPAMAQEVHAMLRKQLQAK-NAEAAMQVRILYGGSMKPENAKELLAMSDIDGGLIGGAALKAADFLAIVHAA 248
BLAST of EH406435 vs. ExPASy Swiss-Prot
Match: TPIS_SHELP (Triosephosphate isomerase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=tpiA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.038e-22 Identity = 57/109 (52.29%), Postives = 75/109 (68.81%), Query Frame = 1 Query: 1 VVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIKSA 318 V+AE+ + EK +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L + VS + + RI+YGGSV +N +L AQPDVDG L+GGASL EF+ + A Sbjct: 150 VIAEELDVVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSE-VSPYIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGASLNSTEFLSLCSIA 257
BLAST of EH406435 vs. ExPASy Swiss-Prot
Match: TPIS_SHEDO (Triosephosphate isomerase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=tpiA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.771e-22 Identity = 56/105 (53.33%), Postives = 74/105 (70.48%), Query Frame = 1 Query: 1 VVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDI 306 V+AE+ + EK +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L + VS + + RI+YGGSV +N +L AQPDVDG L+GGASL EF+ + Sbjct: 150 VIAEELDIVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSE-VSPFIGENVRILYGGSVTPSNAADLFAQPDVDGGLIGGASLNSSEFLSL 253
BLAST of EH406435 vs. ExPASy Swiss-Prot
Match: TPIS_SHESH (Triosephosphate isomerase OS=Shewanella sediminis (strain HAW-EB3) GN=tpiA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.021e-22 Identity = 56/109 (51.38%), Postives = 74/109 (67.89%), Query Frame = 1 Query: 1 VVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIKSA 318 V+AE+ + EK +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L + VS + + RI+YGGSV +N +L AQPDVDG L+GG SL EF+ + A Sbjct: 150 VIAEELDVVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSE-VSPYIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGVSLNSTEFLSLCSIA 257
BLAST of EH406435 vs. ExPASy Swiss-Prot
Match: TPIS_SHEAM (Triosephosphate isomerase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=tpiA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.021e-22 Identity = 56/109 (51.38%), Postives = 75/109 (68.81%), Query Frame = 1 Query: 1 VVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIKSA 318 V+AE+ + EK +DN ++AYEP+WA+GTGK ATP QAQEVHA +R+ L + VS + + RI+YGGSV +N +L AQPDVDG L+GGASL EF+ + A Sbjct: 150 VIAEELDVVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRRRLSE-VSPFIGENVRILYGGSVTPSNAADLFAQPDVDGGLIGGASLNSTEFLTLCSIA 257
BLAST of EH406435 vs. ExPASy Swiss-Prot
Match: TPIS_COLP3 (Triosephosphate isomerase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=tpiA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.021e-22 Identity = 57/112 (50.89%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 1 VVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSATVKK 330 V++ Q + + ++I + +VV+AYEPVWAIGTGK A+ A AQE H +RK+L + +VA ++YGGSVN ANC+EL AQ D+DG L+GGASLK E II SA K Sbjct: 146 VLSAQIQPVIDEIGIEKFKDVVIAYEPVWAIGTGKTASSAMAQETHQFIRKFLAQQ-NEQVADKVPLLYGGSVNAANCEELFAQTDIDGGLIGGASLKAEQFKIICSAAKGK 256
BLAST of EH406435 vs. ExPASy Swiss-Prot
Match: TPIS_BACFR (Triosephosphate isomerase OS=Bacteroides fragilis GN=tpiA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.021e-22 Identity = 52/97 (53.61%), Postives = 69/97 (71.13%), Query Frame = 1 Query: 1 VVAEQTKAIAE-KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 288 VVA Q ++ + ++ +VLAYEPVWAIGTGK A+PAQAQE+HA +R + + E+A +T I+YGGS +N KEL A PDVDG L+GGA+LK Sbjct: 143 VVAAQLASVFDLSAEDFSKIVLAYEPVWAIGTGKTASPAQAQEIHAFIRSAVAEKYGKEIADNTSILYGGSCKPSNAKELFANPDVDGGLIGGAALK 239 The following BLAST results are available for this feature:
BLAST of EH406435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EH406435 ID=EH406435; Name=EH406435; organism=Citrus sinensis; type=EST; length=556bpback to top |