EY665024

Overview
NameEY665024
Unique NameEY665024
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665024 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 4.615e-27
Identity = 63/142 (44.37%), Postives = 83/142 (58.45%), Query Frame = 3
Query:   66 ADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPIFFYSTLWESDDWATRGGLEKIDWSKAPFYAYYIDFDIEGCPFPGPANCASNPGNWWEANNYQALTAMEARIYRWVRLNHMIYDYCTDKSRYPV-PPPEC 482
            A++H Y+ILWN   I+  VDD PIR +KN  S    FP N+P+  Y++LW +DDWATRGGL K DWSKAPF A Y +  I+  P            NW+     Q + +      +WV+ N+MIY+YCTD  R+P   P EC
Sbjct:  138 ANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGGLVKTDWSKAPFMASYRNIKIDSKP----------NSNWYT----QEMDSTSQARLKWVQKNYMIYNYCTDHRRFPQGAPKEC 265          
BLAST of EY665024 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.642e-25
Identity = 58/160 (36.25%), Postives = 88/160 (55.00%), Query Frame = 3
Query:   66 ADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPIFFYSTLWESDDWATRGGLEKIDWSKAPFYAYYIDFDIEGC----------------PFPGPANCASNPGNWWEANNYQALTAMEARIYRWVRLNHMIYDYCTDKSRYPVP-PPECLA 488
            A +H Y+ILWN  HIVFY+D  PIR +KN       +P NQP+  Y +LW +DDWATRGGL K +WS+ PF A +++++ E                  P    ++ +S+   W+   + + + +   ++ RWV+   M+Y+YC DK R+    P EC A
Sbjct:  142 AAFHNYSILWNPSHIVFYIDGKPIREFKNLEVLGVAYPKNQPMRMYGSLWNADDWATRGGLVKTNWSQGPFVASFMNYNSENACVWSIVNGTTTTSPCSPGDSTSSSSSSTSEWF---SQRGMDSSSKKVLRWVQRKFMVYNYCKDKKRFSNGLPVECTA 298          
BLAST of EY665024 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.370e-23
Identity = 56/154 (36.36%), Postives = 84/154 (54.55%), Query Frame = 3
Query:   39 RVNLLLKTPADYHLYTILWNHHHIVFYVDDVPIR-VYKNSGRAPFPMNQPIFFYSTLWESDDWATRGGLEKIDWSKAPFYAYYIDFDIEGCPFPG----PANCASNPGNWWEANNYQALTAMEARIYRWVRLNHMIYDYCTDKSRYPVPPPECL 485
            R  L      ++H Y+ILW  H I+F+VDDVPIR V +N         +P+  Y+T+W++ DWAT GG  K ++  APF A +  F ++GC        P +C S+  ++ E+ +Y ++ + +    R  R   M Y YC D  RYP P PEC+
Sbjct:  142 RYRLWFDPSKEFHRYSILWTPHKIIFWVDDVPIREVIRNDAMGADYPAKPMALYATIWDASDWATSGGKYKANYKFAPFVAEFKSFSLDGCSVDPIQEVPMDC-SDSVDFLESQDYSSINSHQRAAMRRFRQRFMYYSYCYDTLRYPEPLPECV 294          
BLAST of EY665024 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 9.008e-23
Identity = 52/138 (37.68%), Postives = 75/138 (54.35%), Query Frame = 3
Query:   69 DYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPIFFYSTLWESDDWATRGGLEKIDWSKAPFYAYYIDFDIEGCPFPGPANCASNPGNWWEANNYQALTAMEARIYRWVRLNHMIYDYCTDKSRYPVPPPEC 482
            D+H Y ILWN + IVF+VDDVPIR Y     A FP  +P++ Y ++W++ DWAT  G  K D+   PF A Y +F + GC     ++C   P +     N + L+  +     W + N ++Y+YC D  R     PEC
Sbjct:  160 DFHHYAILWNPNQIVFFVDDVPIRTYNRKNEAIFP-TRPMWVYGSIWDASDWATENGRIKADYRYQPFVAKYKNFKLAGCTADSSSSC--RPPSPAPMRN-RGLSRQQMAALTWAQRNFLVYNYCHDPKRDHTQTPEC 293          
BLAST of EY665024 vs. ExPASy Swiss-Prot
Match: XTH8_ORYSJ (Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.176e-22
Identity = 54/146 (36.99%), Postives = 73/146 (50.00%), Query Frame = 3
Query:   66 ADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPIFFYSTLWESDDWATRGGLEKIDWSKAPFYAYYIDFDIEGCPFPGPAN------CASNPGNWWEANNYQALTAMEARIYRWVRLNHMIYDYCTDKSRYPVP-PPEC 482
            AD+H Y I+WN  +I+F VDDVP+R +K      +P ++P+  ++TLW+   WATR G  KIDWS APF   Y  +    C    PA       C      W     ++ L   E     W   N+M Y+YC D  R+P   P EC
Sbjct:  146 ADFHTYKIIWNPQNIIFQVDDVPVRTFKKYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACVNNNPAGGWSSSWCPEGTSAW----IHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAEC 287          
BLAST of EY665024 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.423e-22
Identity = 58/166 (34.94%), Postives = 88/166 (53.01%), Query Frame = 3
Query:   39 RVNLLLKTPADYHLYTILWNHHHIVFYVDDVPIR--VYKNSGRAPFPMNQPIFFYSTLWESDDWATRGGLEKIDWSKAPFYAYYIDFDIEGC----PFPGPANCASNPGNW-----------WEANNYQALTAMEARIYRWVRLNHMIYDYCTDKSRYPVPPPECL 485
            R  L      ++H Y+ILW    I+F+VDDVPIR  + K      +P  +P+  Y+T+W++  WAT GG   +D++ +PF + + D  ++GC     FPG  N  +N GN+             +N+Y  ++  +A   R  R  +M Y YC D  RY VPPPEC+
Sbjct:  150 RYRLWFDPSKEFHRYSILWTPTKIIFWVDDVPIREILRKEEMNGDYPQ-KPMSLYATIWDASSWATSGGKFGVDYTFSPFVSEFKDIALDGCNVSDSFPGENN-NNNIGNYNNINCSVSDQFLMSNDYSTISPKQATAMRRFRERYMYYSYCYDTIRYSVPPPECV 313          
BLAST of EY665024 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.839e-22
Identity = 54/145 (37.24%), Postives = 82/145 (56.55%), Query Frame = 3
Query:   72 YHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPIFFYSTLWESDDWATRGGLEKIDWSKAPFYAYYIDFDIEGCPFPGPANCAS--NP---GNWWEANNYQALTAMEARIYRWVRLNHMIYDYCTDKSRYP-VPPPEC 482
            +H YTI WN   +V++VD  PIRV++N  S    +P  Q +  +++LW ++DWAT+GG  K +W+ APF A    +    C + G  +     +P    NWW + ++  LTA +    + +R   MIYDYC D +R+  V PPEC
Sbjct:  143 FHNYTIHWNPSEVVWFVDGTPIRVFRNYESEGIAYPNKQGMKVFASLWNAEDWATQGGRVKTNWTLAPFVAEGRRYKARACLWKGSVSIKQCVDPTIRSNWWTSPSFSQLTASQLTKMQKIRDGFMIYDYCKDTNRFKGVMPPEC 287          
BLAST of EY665024 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.898e-21
Identity = 49/149 (32.89%), Postives = 78/149 (52.35%), Query Frame = 3
Query:   72 YHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPIFFYSTLWESDDWATRGGLEKIDWSKAPFYAYYIDFDIEGCPF-----PGPANCASNPGNW-----WEANNYQALTAMEARIYRWVRLNHMIYDYCTDKSRYPVPPPEC 482
            +H YT++WN HH VF VD++P+R + N G   + +P ++P+  Y T+W+  +WAT+GG   +++  APF     D ++ GC        G   C  + G+       +  ++  L+  +     W R   M Y YC+DK RY V P EC
Sbjct:  162 FHDYTLIWNSHHTVFLVDNIPVRQFPNRGAFTSAYP-SKPMSLYVTVWDGSEWATKGGKYPVNYKYAPFVVSVADVELSGCSVNNGSSTGSGPCTKSGGSISSLDPVDGQDFATLSKNQINAMDWARRKLMFYSYCSDKPRYKVMPAEC 309          
BLAST of EY665024 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.784e-21
Identity = 49/138 (35.51%), Postives = 73/138 (52.90%), Query Frame = 3
Query:   69 DYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPIFFYSTLWESDDWATRGGLEKIDWSKAPFYAYYIDFDIEGCPFPGPANCASNPGNWWEANNYQALTAMEARIYRWVRLNHMIYDYCTDKSRYPVPPPEC 482
            D+H Y ILW+   I+F VDD+PIR Y     + FP+ +P++ Y ++W++  WAT  G  K D+   PF A Y +F   GC     A C     + + +     LT  + +  RWV+ + M+Y+YC D  R     PEC
Sbjct:  164 DFHHYAILWSPREIIFLVDDIPIRRYPKKSASTFPL-RPMWLYGSIWDASSWATEDGKYKADYKYQPFTAKYTNFKALGCTAYSSARCYPLSASPYRSG---GLTRQQHQAMRWVQTHSMVYNYCKDYKRDHSLTPEC 297          
BLAST of EY665024 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 7.891e-19
Identity = 52/152 (34.21%), Postives = 78/152 (51.32%), Query Frame = 3
Query:   39 RVNLLLKTPADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPIFFYSTLWESDDWATRGGLEKIDWSKAPFYAYYIDFDIEGCPF-PGPANCASNPGNWWEANNYQALTAMEARIYRWVRLNHMIYDYCTDKSRYPVPPPECL 485
            R NL      D+H Y+ILW+  HI+F+VD+VPIR  K +      FP ++P+  Y+T+W+   WAT GG   +++  AP+ A + D  + GCP  P       + G   +    Q +T  +       R   M Y YC D++RY V   EC+
Sbjct:  141 RYNLWFDPTEDFHQYSILWSDSHIIFFVDNVPIREVKRTAEMGGHFP-SKPMSLYTTIWDGSKWATNGGKYGVNYKYAPYIARFSDLVLHGCPVDPIEQFPRCDEGAAEDMRAAQEITPSQRSKMDVFRRRLMTYSYCYDRARYNVALSECV 291          
The following BLAST results are available for this feature:
BLAST of EY665024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH24_ARATH4.615e-2744.37Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH21_ARATH5.642e-2536.25Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH30_ARATH2.370e-2336.36Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH31_ARATH9.008e-2337.68Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ORYSJ1.176e-2236.99Xyloglucan endotransglycosylase/hydrolase protein ... [more]
XTH29_ARATH3.423e-2234.94Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH26_ARATH5.839e-2237.24Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH33_ARATH2.898e-2132.89Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH32_ARATH3.784e-2135.51Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH27_ARATH7.891e-1934.21Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665024 ID=EY665024; Name=EY665024; organism=Citrus sinensis; type=EST; length=793bp
GCCGGNATTCACACCCCGACCCAGCGTCCGANAGAACTAGAGTGAACCTT
TTGTTAAAAACTCCTGCAGATTATCACCTTTACACTATTCTCTGGAACCA
TCACCATATTGTCTTCTATGTGGATGATGTGCCCATCAGGGTTTACAAAA
ACAGTGGAAGGGCTCCATTTCCAATGAACCAACCCATTTTTTTTTATTCA
ACGCTGTGGGAATCAGATGACTGGGCAACAAGAGGTGGTCTAGAGAAAAT
AGATTGGAGCAAAGCTCCTTTTTATGCTTATTACATAGACTTTGATATTG
AGGGCTGCCCATTTCCTGGACCAGCAAACTGTGCCTCGAACCCAGGTAAC
TGGTGGGAGGCAAATAATTATCAAGCCCTCACCGCCATGGAAGCAAGAAT
ATACAGATGGGTTCGTCTCAACCACATGATCTATGATTATTGCACTGATA
AATCAAGATACCCAGTACCCCCACCGGAATGCCTTGCCGGCATATAAATT
CAACCCGCCAATTAATTAAGCAGTTGGACGGTACTCCATATCCGTATCAT
ATCATGTATATTACTTCACGTACACGTCCTTTGTATTATTCCCTATTCGT
GTGAAAAGACTTATACGCATATCAAGGGAGGGGCGGGAGGGGAAATAAAC
ATTGTGTGCATTTAAATGTAATTATGGGAGTGGGAAATATGTGGGTTTTC
TGCTCTGCTTGTACCATATATAAGTCTGAATTTGATGCACAGTATTCTGT
GCCAATAAAAGCTTCTTCATAAAAAAAAAAAAAAAAAAAAAAA
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