EY665021

Overview
NameEY665021
Unique NameEY665021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_PHOPR (Glycine dehydrogenase [decarboxylating] OS=Photobacterium profundum GN=gcvP PE=3 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 6.523e-87
Identity = 145/243 (59.67%), Postives = 188/243 (77.37%), Query Frame = 1
Query:   40 ASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            A +A +   AIP    R S YLTHPVFN++H+E +++RY+  L++K+ SL H MIPLGSCTMKLNA  EM+P+TWP F ++HPFAPADQ +GYQE+ + L E LC++TG+D+FSLQPN+GA GEYAGL+ I+ YH+  GD HRNVC+IP SAHGTNPA+AAM  MK+V VG D KGN+++E+L    E + DNLS +M+TYPSTHGVYE ++ E+C +    GGQVY+DGANMNA   LT+PG
Sbjct:  452 ADIAADEFAAIPESCRRTSKYLTHPVFNEHHSETQMMRYMKKLENKDYSLTHGMIPLGSCTMKLNAAAEMIPITWPEFGSLHPFAPADQTKGYQELASKLSEMLCSVTGYDAFSLQPNSGAQGEYAGLIAIQRYHQHNGDSHRNVCLIPSSAHGTNPASAAMVSMKVVVVGCDEKGNVDVEDLKVKIEKHRDNLSCIMITYPSTHGVYEEAVREVCDLVHDAGGQVYLDGANMNAQVGLTNPG 694          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_THEEB (Glycine dehydrogenase [decarboxylating] OS=Thermosynechococcus elongatus (strain BP-1) GN=gcvP PE=3 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 8.519e-87
Identity = 150/233 (64.38%), Postives = 180/233 (77.25%), Query Frame = 1
Query:   70 IPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +P+ L R+SPYL HPVF  YH+EH LLRYIH LQ+K+LSL  SMIPLGSCTMKLNAT EM+P++WP F  +HPFAP +QAQGYQ +F  L   L  ITGFD+ SLQPNAG+ GEYAGL+VIR YH +RG+  RNVC+IP SAHGTNPA+A M GM++V+V  DA+GNI++ +L   AE   D L+ LM+TYPSTHGV+E  I +IC I  RYGGQVYMDGANMNA   L  PG
Sbjct:  461 LPAALKRQSPYLQHPVFQDYHSEHALLRYIHRLQAKDLSLTTSMIPLGSCTMKLNATAEMLPISWPEFNQLHPFAPQEQAQGYQALFRELAAMLAEITGFDAISLQPNAGSQGEYAGLLVIRQYHHSRGESQRNVCLIPTSAHGTNPASAVMAGMQVVAVNCDAQGNIDVADLAAKAETYGDRLAALMITYPSTHGVFETGICQICDIIHRYGGQVYMDGANMNAQVGLCRPG 693          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_SYNY3 (Glycine dehydrogenase [decarboxylating] OS=Synechocystis sp. (strain PCC 6803) GN=gcvP PE=3 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.898e-86
Identity = 155/253 (61.26%), Postives = 188/253 (74.31%), Query Frame = 1
Query:    7 FLGANHFHSLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSP 765
            F G ++       L  EV+T+ P+ LTR+S YL   VFN+YH+E ELLRY+H L+SK+L+L  SMIPLGSCTMKLNAT EMMPVTWP F  IHPFAPA Q +GYQ +F  L  WL  ITGFD+ SLQPNAG+ GEYAGL VIR YH +RG+  RN+C+IP SAHGTNPA+A MCGM++V V  D +GNI++E+L + AE   D L+ LMVTYPSTHGV+E +I  IC I  R+GG+VYMDGANMNA   L  P
Sbjct:  460 FAGKDNLPFTPEELWSEVKTSFPADLTRQSLYLQDAVFNQYHSETELLRYLHQLESKDLALNTSMIPLGSCTMKLNATAEMMPVTWPEFGKIHPFAPAGQTEGYQILFAQLEAWLGEITGFDAISLQPNAGSQGEYAGLQVIRQYHLSRGEEQRNICLIPESAHGTNPASAVMCGMQVVPVKCDGEGNIDVEDLTSKAEKYGDRLAALMVTYPSTHGVFEATIGTICDIVHRFGGEVYMDGANMNAQVGLCRP 712          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_DEIRA (Glycine dehydrogenase [decarboxylating] OS=Deinococcus radiodurans GN=gcvP PE=3 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.898e-86
Identity = 145/241 (60.17%), Postives = 186/241 (77.18%), Query Frame = 1
Query:   46 LAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            L  E    IP+ L R+S +LTHPVFN +H+EH +LRY+  L++K+ SL H MIPLGSCTMKLNATTEM+PVTWP F  +HPFAP  Q QGY EM   L  WL  ITG+D+ S+QPN+GA GEYAGL+VIR YH+ARG+ HRN+C+IP SAHGTNPA+AAM GM++V V TD +GNI+ ++L   AEA+ D+L+ LM+TYPSTHGVYE ++ ++C +  ++GGQVY+DGANMNA   +  PG
Sbjct:  444 LDAEAVDGIPAPLKRQSDFLTHPVFNTHHSEHGMLRYLKQLENKDYSLTHGMIPLGSCTMKLNATTEMIPVTWPEFGGLHPFAPESQTQGYAEMLAELERWLADITGYDAVSMQPNSGAQGEYAGLLVIRKYHEARGEAHRNICLIPASAHGTNPASAAMMGMQVVVVKTDEQGNIDFDDLKAQAEAHSDHLAALMITYPSTHGVYEENVRDVCDLIHQHGGQVYLDGANMNAMVGVAKPG 684          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_NOSP7 (Glycine dehydrogenase [decarboxylating] OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=gcvP PE=3 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 5.522e-86
Identity = 150/231 (64.94%), Postives = 177/231 (76.62%), Query Frame = 1
Query:   76 SGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            S   R S YLTHPVFN+YH+E ELLRY+H L+SK+LSL  SMIPLGSCTMKLNAT EM+PVTW  F  IHPFAPA Q QGYQ +F  L  WL  ITGF   SLQPNAG+ GEYAGL+VIR YH+ RG+ HRNVC+IP SAHGTNPA+A MCGMK+V+V  D++GNI++++L   AE +   L+ LMVTYPSTHGV+E  I EIC +   +GGQVYMDGANMNA   +  PG
Sbjct:  481 STFARTSNYLTHPVFNRYHSETELLRYLHKLESKDLSLTTSMIPLGSCTMKLNATAEMIPVTWEEFGKIHPFAPASQTQGYQILFQQLEAWLAEITGFAGISLQPNAGSQGEYAGLLVIRQYHENRGEAHRNVCLIPTSAHGTNPASAVMCGMKVVAVACDSQGNIDVDDLKAKAEKHSHELAALMVTYPSTHGVFEEPIQEICAVVHSHGGQVYMDGANMNAQVGICRPG 711          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_VIBPA (Glycine dehydrogenase [decarboxylating] OS=Vibrio parahaemolyticus GN=gcvP PE=3 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 7.212e-86
Identity = 147/246 (59.76%), Postives = 189/246 (76.83%), Query Frame = 1
Query:   31 SLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +L+  +A     AIP  L R S YLTHPVFN YH+E +++RY+  L++K+ SL H MIPLGSCTMKLNA  EM+P+TWP F +IHPFAPA+QA GY  +  +L E LC ITG+D+FSLQPN+GA+GEYAGL+ I+ YH++RG+ HRNVC+IP SAHGTNPATA+M  MK+V V  D +GNI+I++L    E + DNLS++M+TYPSTHGVYE  + E+C++    GGQVY+DGANMNA   LTSPG
Sbjct:  446 ALSTEVAGNEFAAIPEALRRTSEYLTHPVFNTYHSETQMMRYLKQLENKDFSLTHGMIPLGSCTMKLNAAAEMIPITWPEFGSIHPFAPAEQAAGYAALAKDLKEKLCEITGYDAFSLQPNSGASGEYAGLIAIQRYHESRGEGHRNVCLIPSSAHGTNPATASMVSMKVVVVKCDDEGNIDIDDLAAKIEKHKDNLSSIMITYPSTHGVYEEKVKEVCEMVHAAGGQVYLDGANMNAQVGLTSPG 691          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_IDILO (Glycine dehydrogenase [decarboxylating] OS=Idiomarina loihiensis GN=gcvP PE=3 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 9.419e-86
Identity = 145/234 (61.97%), Postives = 183/234 (78.21%), Query Frame = 1
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +IP+ L R+S YL HPVFN+YH+E E+LRYI  L++K+L+L HSMI LGSCTMKLNAT EM+PVTWP F  +HPF PA+QAQGY E+ + L EWL  +TG+D+ S+QPN+GA GEYAGL+ I+ YH++RGD HRN+C+IP SAHGTNPA+A M  MK+V V  D  GN+++++L   AE   +NLS +MVTYPSTHGVYE  I +IC +   YGGQVYMDGANMNA   +TSPG
Sbjct:  464 SIPADLVRQSQYLQHPVFNEYHSETEMLRYIKKLENKDLALNHSMISLGSCTMKLNATAEMIPVTWPEFGQLHPFCPAEQAQGYYELVSTLSEWLIDVTGYDAMSMQPNSGAQGEYAGLLAIQKYHESRGDGHRNICLIPSSAHGTNPASAQMMNMKVVVVDCDKHGNVDMDDLKAKAEEAGENLSCIMVTYPSTHGVYEEGIKDICDLVHNYGGQVYMDGANMNAQVGVTSPG 697          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_SHEFN (Glycine dehydrogenase [decarboxylating] OS=Shewanella frigidimarina (strain NCIMB 400) GN=gcvP PE=3 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 6.105e-85
Identity = 147/256 (57.42%), Postives = 189/256 (73.83%), Query Frame = 1
Query:   10 LGANHFHSLA---ASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            LGA H   +A   A +      +IP  L R+   LTHP FN+Y +E E++RYI  L++K+L+L HSMI LGSCTMKLNA  EM+PV+WP FAN+HPF P DQAQGY ++ N L E+L  ITG+DS  +QPN+GA GEYAGL+ I+ YH++RGD HRN+C+IP SAHGTNPA+A + GMK+V    D +GN+++E+L   A    D+LS +M+TYPSTHGVYE SI E+C+I  +YGGQVY+DGANMNA   LTSPG
Sbjct:  441 LGAGHGLDVATFDADIVANGSQSIPDALVRQDAVLTHPTFNRYQSETEMMRYIKRLENKDLALNHSMISLGSCTMKLNAAVEMLPVSWPEFANMHPFCPLDQAQGYTQLINELSEFLVKITGYDSVCIQPNSGAQGEYAGLLAIKKYHESRGDAHRNICLIPQSAHGTNPASAQLAGMKVVVTACDKQGNVDLEDLRTKAAELADSLSCIMITYPSTHGVYEESIREVCEIVHQYGGQVYLDGANMNAQVGLTSPG 696          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP1_COLP3 (Glycine dehydrogenase [decarboxylating] 1 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=gcvP1 PE=3 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 7.974e-85
Identity = 146/235 (62.13%), Postives = 183/235 (77.87%), Query Frame = 1
Query:   64 TAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            ++IP+ L RES  LTHPVFN YH+E E+LRYI  L++K+L+L HSMI LGSCTMKLNAT +M+PV+WP FAN+HPFAP +QAQGY+ M + L +WL  +TG+D  S+QPN+GA GEYAGL+ I  YH++RGD HRN+C+IP SAHGTNPA+A M  MKIV V  D +GN+++ +L   AE   DNL+ +M+TYPSTHGVYE +I EIC I    GGQVY+DGANMNA   LTSPG
Sbjct:  466 SSIPASLVRESAILTHPVFNSYHSETEMLRYIKRLENKDLALNHSMISLGSCTMKLNATAQMIPVSWPEFANMHPFAPVNQAQGYKAMIDELAKWLVELTGYDKMSMQPNSGAQGEYAGLIAISKYHESRGDSHRNICLIPASAHGTNPASAMMVDMKIVIVACDKEGNVDMADLKAKAEELADNLACIMITYPSTHGVYETTIAEICNIIHDNGGQVYLDGANMNAQVGLTSPG 700          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_VIBHB (Glycine dehydrogenase [decarboxylating] OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=gcvP PE=3 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.776e-84
Identity = 144/246 (58.54%), Postives = 188/246 (76.42%), Query Frame = 1
Query:   31 SLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +L+  +A     AIP  L R + YLTHPVFN +H+E +++RY+  L++K+ SL H MIPLGSCTMKLNA  EM+PVTWP F +IHPFAPADQA GY  +  +L E LC ITG+D+FSLQPN+GA+GEYAGL+ I+ YH++RG+ HRNVC+IP SAHGTNPATA+M  MK+V V  D +GNI++ +L    + + DNLS++M+TYPSTHGVYE  + E+C++    GGQVY+DGANMNA   LT+PG
Sbjct:  446 ALSTEIAGNEFAAIPEALRRTTEYLTHPVFNTHHSETQMMRYLKQLENKDFSLTHGMIPLGSCTMKLNAAAEMIPVTWPEFGSIHPFAPADQAAGYAALAKDLKEKLCEITGYDAFSLQPNSGASGEYAGLIAIQRYHESRGEGHRNVCLIPSSAHGTNPATASMVSMKVVVVKCDEEGNIDVTDLAAKIKKHKDNLSSIMITYPSTHGVYEEQVKEVCEMVHAAGGQVYLDGANMNAQVGLTTPG 691          
The following BLAST results are available for this feature:
BLAST of EY665021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSP_PHOPR6.523e-8759.67Glycine dehydrogenase [decarboxylating] OS=Photoba... [more]
GCSP_THEEB8.519e-8764.38Glycine dehydrogenase [decarboxylating] OS=Thermos... [more]
GCSP_SYNY31.898e-8661.26Glycine dehydrogenase [decarboxylating] OS=Synecho... [more]
GCSP_DEIRA1.898e-8660.17Glycine dehydrogenase [decarboxylating] OS=Deinoco... [more]
GCSP_NOSP75.522e-8664.94Glycine dehydrogenase [decarboxylating] OS=Nostoc ... [more]
GCSP_VIBPA7.212e-8659.76Glycine dehydrogenase [decarboxylating] OS=Vibrio ... [more]
GCSP_IDILO9.419e-8661.97Glycine dehydrogenase [decarboxylating] OS=Idiomar... [more]
GCSP_SHEFN6.105e-8557.42Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP1_COLP37.974e-8562.13Glycine dehydrogenase [decarboxylating] 1 OS=Colwe... [more]
GCSP_VIBHB1.776e-8458.54Glycine dehydrogenase [decarboxylating] OS=Vibrio ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665021 ID=EY665021; Name=EY665021; organism=Citrus sinensis; type=EST; length=770bp
TAGTTTTTTCTGGGGGCAAATCATTTCCATTCACTCGCTGCATCTCTGGC
TGAAGAGGTTGAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGT
ATCTGACACATCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTT
AGATACATTCATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTAT
GATTCCATTGGGATCTTGTACAATGAAATTGAATGCAACAACTGAAATGA
TGCCAGTGACATGGCCTAGCTTTGCTAACATACACCCTTTTGCCCCTGCT
GACCAGGCTCAGGGTTATCAGGAAATGTTTAACAATCTGGGTGAGTGGCT
GTGTACCATTACTGGCTTTGACTCTTTCTCTTTGCAACCAAATGCTGGTG
CAGCTGGTGAGTATGCTGGGCTCATGGTTATCCGCGCTTATCATAAGGCA
AGAGGAGACCATCACCGCAATGTGTGCATTATACCCGTGTCAGCCCATGG
GACAAATCCTGCTACTGCTGCCATGTGTGGAATGAAGATTGTTTCTGTTG
GAACTGATGCCAAGGGTAACATCAACATTGAAGAGTTAATGAATGCCGCA
GAAGCTAATATGGACAACCTATCAACCCTTATGGTAACGTACCCTTCAAC
TCATGGAGTTTATGAAAGAAGTATTGATGAGATATGCAAGATAAATTCAC
GATATGGAGGTCAAGTATATATGGACGGGGCTAACATGAATGCTCANGGT
CGTCTGACAAGCCCTGGTTA
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