EY665021

Overview
NameEY665021
Unique NameEY665021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_SALAR (Glycine dehydrogenase [decarboxylating] OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=gcvP PE=3 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.838e-81
Identity = 133/234 (56.84%), Postives = 181/234 (77.35%), Query Frame = 1 
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA  EM+P+TWP FA +HPF P +QA+GYQ+M + L +WL  +TG+D+  +QPN+GA GEYAGL+ IR YH++R + HR++C+IP SAHGTNPA+A M GM++V V  D  GNI++ +L   AE + +NLS +MVTYPSTHGVYE +I ++C I  ++GGQVY+DGANMNA   +TSPG
Sbjct:  462 SIQQSMLRDDAVLTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQMISQLSDWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVACDKNGNIDLADLRAKAELHANNLSCIMVTYPSTHGVYEETIRDVCDIVHQFGGQVYLDGANMNAQVGITSPG 695
[Close]
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_BRASO (Glycine dehydrogenase [decarboxylating] OS=Bradyrhizobium sp. (strain ORS278) GN=gcvP PE=3 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.838e-81
Identity = 138/243 (56.79%), Postives = 182/243 (74.90%), Query Frame = 1 
Query:   40 ASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            A +  E   A+P+ L R+ PYLTHPVF+ + +E E+LRY+  L  ++L+L  +MIPLGSCTMKLNATTEM+P+TWP F+++HPF P  QA GY  MF +L +WLC I+G+D+ SLQPN+GA GEYAGL+ IR YH ARG+ HR +C+IP SAHGTNPA+A M GM++V VG DA GN+++ +L   AEA+   L+ +M+TYPSTHGV+E  I +IC I   +GGQVY+DGAN+NA   L  PG
Sbjct:  447 ADIEAEARDAVPAELKRQRPYLTHPVFHAHRSETEMLRYLRKLADRDLALDRAMIPLGSCTMKLNATTEMIPLTWPEFSSLHPFVPRAQAAGYHAMFADLQDWLCRISGYDAVSLQPNSGAQGEYAGLLAIRGYHAARGEAHRTICLIPSSAHGTNPASAHMVGMEVVVVGCDAGGNVDLADLKAKAEAHSQKLAAIMITYPSTHGVFEEHIRDICDIVHAHGGQVYLDGANLNAQVGLARPG 689
[Close]
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_SALTY (Glycine dehydrogenase [decarboxylating] OS=Salmonella typhimurium GN=gcvP PE=3 SV=3)

HSP 1 Score: 301.982 bits (772), Expect = 2.401e-81
Identity = 132/234 (56.41%), Postives = 181/234 (77.35%), Query Frame = 1 
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA  EM+P+TWP FA +HPF P +QA+GY +M + L +WL  +TG+D+  +QPN+GA GEYAGL+ IR YH++R + HR++C+IP SAHGTNPA+A M GM++V V  D  GNI++++L   AE +  NLS +MVTYPSTHGVYE +I E+C++  ++GGQVY+DGANMNA   +TSPG
Sbjct:  462 SIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYHQMISQLSDWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVACDKNGNIDLDDLRAKAEQHAANLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDGANMNAQVGITSPG 695
[Close]
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_SALPC (Glycine dehydrogenase [decarboxylating] OS=Salmonella paratyphi C (strain RKS4594) GN=gcvP PE=3 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.401e-81
Identity = 132/234 (56.41%), Postives = 181/234 (77.35%), Query Frame = 1 
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA  EM+P+TWP FA +HPF P +QA+GY +M + L +WL  +TG+D+  +QPN+GA GEYAGL+ IR YH++R + HR++C+IP SAHGTNPA+A M GM++V V  D  GNI++++L   AE +  NLS +MVTYPSTHGVYE +I E+C++  ++GGQVY+DGANMNA   +TSPG
Sbjct:  462 SIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYHQMISQLSDWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVACDKNGNIDLDDLRAKAEQHAANLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDGANMNAQVGITSPG 695
[Close]
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_SALPB (Glycine dehydrogenase [decarboxylating] OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=gcvP PE=3 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.401e-81
Identity = 132/234 (56.41%), Postives = 181/234 (77.35%), Query Frame = 1 
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA  EM+P+TWP FA +HPF P +QA+GY +M + L +WL  +TG+D+  +QPN+GA GEYAGL+ IR YH++R + HR++C+IP SAHGTNPA+A M GM++V V  D  GNI++++L   AE +  NLS +MVTYPSTHGVYE +I E+C++  ++GGQVY+DGANMNA   +TSPG
Sbjct:  462 SIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYHQMISQLSDWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVACDKNGNIDLDDLRAKAEQHAANLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDGANMNAQVGITSPG 695
[Close]
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_SALNS (Glycine dehydrogenase [decarboxylating] OS=Salmonella newport (strain SL254) GN=gcvP PE=3 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.401e-81
Identity = 132/234 (56.41%), Postives = 181/234 (77.35%), Query Frame = 1 
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA  EM+P+TWP FA +HPF P +QA+GY +M + L +WL  +TG+D+  +QPN+GA GEYAGL+ IR YH++R + HR++C+IP SAHGTNPA+A M GM++V V  D  GNI++++L   AE +  NLS +MVTYPSTHGVYE +I E+C++  ++GGQVY+DGANMNA   +TSPG
Sbjct:  462 SIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYHQMISQLSDWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVACDKNGNIDLDDLRAKAEQHAANLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDGANMNAQVGITSPG 695
[Close]
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_SALHS (Glycine dehydrogenase [decarboxylating] OS=Salmonella heidelberg (strain SL476) GN=gcvP PE=3 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.401e-81
Identity = 132/234 (56.41%), Postives = 181/234 (77.35%), Query Frame = 1 
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA  EM+P+TWP FA +HPF P +QA+GY +M + L +WL  +TG+D+  +QPN+GA GEYAGL+ IR YH++R + HR++C+IP SAHGTNPA+A M GM++V V  D  GNI++++L   AE +  NLS +MVTYPSTHGVYE +I E+C++  ++GGQVY+DGANMNA   +TSPG
Sbjct:  462 SIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYHQMISQLSDWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVACDKNGNIDLDDLRAKAEQHAANLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDGANMNAQVGITSPG 695
[Close]
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_SALG2 (Glycine dehydrogenase [decarboxylating] OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=gcvP PE=3 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.401e-81
Identity = 132/234 (56.41%), Postives = 181/234 (77.35%), Query Frame = 1 
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA  EM+P+TWP FA +HPF P +QA+GY +M + L +WL  +TG+D+  +QPN+GA GEYAGL+ IR YH++R + HR++C+IP SAHGTNPA+A M GM++V V  D  GNI++++L   AE +  NLS +MVTYPSTHGVYE +I E+C++  ++GGQVY+DGANMNA   +TSPG
Sbjct:  462 SIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYHQMISQLSDWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVACDKNGNIDLDDLRAKAEQHAANLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDGANMNAQVGITSPG 695
[Close]
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_SALEP (Glycine dehydrogenase [decarboxylating] OS=Salmonella enteritidis PT4 (strain P125109) GN=gcvP PE=3 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.401e-81
Identity = 132/234 (56.41%), Postives = 181/234 (77.35%), Query Frame = 1 
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA  EM+P+TWP FA +HPF P +QA+GY +M + L +WL  +TG+D+  +QPN+GA GEYAGL+ IR YH++R + HR++C+IP SAHGTNPA+A M GM++V V  D  GNI++++L   AE +  NLS +MVTYPSTHGVYE +I E+C++  ++GGQVY+DGANMNA   +TSPG
Sbjct:  462 SIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYHQMISQLSDWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVACDKNGNIDLDDLRAKAEQHAANLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDGANMNAQVGITSPG 695
[Close]
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_SALDC (Glycine dehydrogenase [decarboxylating] OS=Salmonella dublin (strain CT_02021853) GN=gcvP PE=3 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.401e-81
Identity = 132/234 (56.41%), Postives = 181/234 (77.35%), Query Frame = 1 
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA  EM+P+TWP FA +HPF P +QA+GY +M + L +WL  +TG+D+  +QPN+GA GEYAGL+ IR YH++R + HR++C+IP SAHGTNPA+A M GM++V V  D  GNI++++L   AE +  NLS +MVTYPSTHGVYE +I E+C++  ++GGQVY+DGANMNA   +TSPG
Sbjct:  462 SIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYHQMISQLSDWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVACDKNGNIDLDDLRAKAEQHAANLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDGANMNAQVGITSPG 695
The following BLAST results are available for this feature:
BLAST of EY665021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSP_SALAR1.838e-8156.84Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_BRASO1.838e-8156.79Glycine dehydrogenase [decarboxylating] OS=Bradyrh... [more]
GCSP_SALTY2.401e-8156.41Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_SALPC2.401e-8156.41Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_SALPB2.401e-8156.41Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_SALNS2.401e-8156.41Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_SALHS2.401e-8156.41Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_SALG22.401e-8156.41Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_SALEP2.401e-8156.41Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_SALDC2.401e-8156.41Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665021 ID=EY665021; Name=EY665021; organism=Citrus sinensis; type=EST; length=770bp
TAGTTTTTTCTGGGGGCAAATCATTTCCATTCACTCGCTGCATCTCTGGC
TGAAGAGGTTGAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGT
ATCTGACACATCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTT
AGATACATTCATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTAT
GATTCCATTGGGATCTTGTACAATGAAATTGAATGCAACAACTGAAATGA
TGCCAGTGACATGGCCTAGCTTTGCTAACATACACCCTTTTGCCCCTGCT
GACCAGGCTCAGGGTTATCAGGAAATGTTTAACAATCTGGGTGAGTGGCT
GTGTACCATTACTGGCTTTGACTCTTTCTCTTTGCAACCAAATGCTGGTG
CAGCTGGTGAGTATGCTGGGCTCATGGTTATCCGCGCTTATCATAAGGCA
AGAGGAGACCATCACCGCAATGTGTGCATTATACCCGTGTCAGCCCATGG
GACAAATCCTGCTACTGCTGCCATGTGTGGAATGAAGATTGTTTCTGTTG
GAACTGATGCCAAGGGTAACATCAACATTGAAGAGTTAATGAATGCCGCA
GAAGCTAATATGGACAACCTATCAACCCTTATGGTAACGTACCCTTCAAC
TCATGGAGTTTATGAAAGAAGTATTGATGAGATATGCAAGATAAATTCAC
GATATGGAGGTCAAGTATATATGGACGGGGCTAACATGAATGCTCANGGT
CGTCTGACAAGCCCTGGTTA
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