EY665021

Overview
NameEY665021
Unique NameEY665021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_STAAB (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.020e-39
Identity = 86/211 (40.76%), Postives = 125/211 (59.24%), Query Frame = 1
Query:  136 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            E +L+R+   L +K   + +   PLGSCTMK N          P F+  HP    DQ QG  E+  +L E L  ITG D  +LQP AGA GE+  LM+ +AYH+  G+ HR+  I+P SAHGTNPA+A+  G K V+V ++ +G ++I++L        +N + +M+T P+T G++E++I EI +I    GG +Y DGAN+NA      PG
Sbjct:   53 ELDLVRHYTELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVDIDDLKRVVN---ENTAAIMLTNPNTLGIFEKNIMEIREIVHNAGGLLYYDGANLNAIMDKVRPG 260          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_STAA9 (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Staphylococcus aureus (strain JH9) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.020e-39
Identity = 86/211 (40.76%), Postives = 125/211 (59.24%), Query Frame = 1
Query:  136 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            E +L+R+   L +K   + +   PLGSCTMK N          P F+  HP    DQ QG  E+  +L E L  ITG D  +LQP AGA GE+  LM+ +AYH+  G+ HR+  I+P SAHGTNPA+A+  G K V+V ++ +G ++I++L        +N + +M+T P+T G++E++I EI +I    GG +Y DGAN+NA      PG
Sbjct:   53 ELDLVRHYTELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVDIDDLKRVVN---ENTAAIMLTNPNTLGIFEKNIMEIREIVHNAGGLLYYDGANLNAIMDKVRPG 260          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_STAA8 (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Staphylococcus aureus (strain NCTC 8325) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.020e-39
Identity = 86/211 (40.76%), Postives = 125/211 (59.24%), Query Frame = 1
Query:  136 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            E +L+R+   L +K   + +   PLGSCTMK N          P F+  HP    DQ QG  E+  +L E L  ITG D  +LQP AGA GE+  LM+ +AYH+  G+ HR+  I+P SAHGTNPA+A+  G K V+V ++ +G ++I++L        +N + +M+T P+T G++E++I EI +I    GG +Y DGAN+NA      PG
Sbjct:   53 ELDLVRHYTELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVDIDDLKRVVN---ENTAAIMLTNPNTLGIFEKNIMEIREIVHNAGGLLYYDGANLNAIMDKVRPG 260          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_STAA3 (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Staphylococcus aureus (strain USA300) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.020e-39
Identity = 86/211 (40.76%), Postives = 125/211 (59.24%), Query Frame = 1
Query:  136 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            E +L+R+   L +K   + +   PLGSCTMK N          P F+  HP    DQ QG  E+  +L E L  ITG D  +LQP AGA GE+  LM+ +AYH+  G+ HR+  I+P SAHGTNPA+A+  G K V+V ++ +G ++I++L        +N + +M+T P+T G++E++I EI +I    GG +Y DGAN+NA      PG
Sbjct:   53 ELDLVRHYTELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVDIDDLKRVVN---ENTAAIMLTNPNTLGIFEKNIMEIREIVHNAGGLLYYDGANLNAIMDKVRPG 260          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_STAA2 (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Staphylococcus aureus (strain JH1) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.020e-39
Identity = 86/211 (40.76%), Postives = 125/211 (59.24%), Query Frame = 1
Query:  136 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            E +L+R+   L +K   + +   PLGSCTMK N          P F+  HP    DQ QG  E+  +L E L  ITG D  +LQP AGA GE+  LM+ +AYH+  G+ HR+  I+P SAHGTNPA+A+  G K V+V ++ +G ++I++L        +N + +M+T P+T G++E++I EI +I    GG +Y DGAN+NA      PG
Sbjct:   53 ELDLVRHYTELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVDIDDLKRVVN---ENTAAIMLTNPNTLGIFEKNIMEIREIVHNAGGLLYYDGANLNAIMDKVRPG 260          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_STAA1 (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.020e-39
Identity = 86/211 (40.76%), Postives = 125/211 (59.24%), Query Frame = 1
Query:  136 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            E +L+R+   L +K   + +   PLGSCTMK N          P F+  HP    DQ QG  E+  +L E L  ITG D  +LQP AGA GE+  LM+ +AYH+  G+ HR+  I+P SAHGTNPA+A+  G K V+V ++ +G ++I++L        +N + +M+T P+T G++E++I EI +I    GG +Y DGAN+NA      PG
Sbjct:   53 ELDLVRHYTELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVDIDDLKRVVN---ENTAAIMLTNPNTLGIFEKNIMEIREIVHNAGGLLYYDGANLNAIMDKVRPG 260          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_BACCR (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.333e-39
Identity = 85/212 (40.09%), Postives = 126/212 (59.43%), Query Frame = 1
Query:  133 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +E +++R+   L ++   +     PLGSCTMK N         +  FANIHP       QG  E+  +L E L  ITG D+ +LQP AGA GE+ GLM+IRAYH+A GD +R   I+P SAHGTNPA+A + G + ++V ++  G +++E+L        +  + LM+T P+T G++E +I E+ +I    GG++Y DGAN+NA      PG
Sbjct:   52 SELDIMRHYTALSNRNHGVDSGFYPLGSCTMKYNPKINESVARFAGFANIHPLQDEKTVQGAMELMYDLQEHLIEITGMDTVTLQPAAGAHGEWTGLMLIRAYHEANGDFNRTKVIVPDSAHGTNPASATVAGFETITVKSNENGLVDLEDLKRVVN---EETAALMLTNPNTLGLFEENILEMAEIVHNAGGKLYYDGANLNAVLSQARPG 260          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_BACC4 (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Bacillus cereus (strain B4264) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.333e-39
Identity = 85/212 (40.09%), Postives = 126/212 (59.43%), Query Frame = 1
Query:  133 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +E +++R+   L ++   +     PLGSCTMK N         +  FANIHP       QG  E+  +L E L  ITG D+ +LQP AGA GE+ GLM+IRAYH+A GD +R   I+P SAHGTNPA+A + G + ++V ++  G +++E+L        +  + LM+T P+T G++E +I E+ +I    GG++Y DGAN+NA      PG
Sbjct:   52 SELDIMRHYTALSNRNHGVDSGFYPLGSCTMKYNPKINESVARFAGFANIHPLQDEKTVQGAMELMYDLQEHLIEITGMDTVTLQPAAGAHGEWTGLMLIRAYHEANGDFNRTKVIVPDSAHGTNPASATVAGFETITVKSNENGLVDLEDLKRVVN---EETAALMLTNPNTLGLFEENILEMAEIVHNAGGKLYYDGANLNAVLSQARPG 260          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_BACC2 (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Bacillus cereus (strain G9842) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.333e-39
Identity = 85/212 (40.09%), Postives = 126/212 (59.43%), Query Frame = 1
Query:  133 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +E +++R+   L ++   +     PLGSCTMK N         +  FANIHP       QG  E+  +L E L  ITG D+ +LQP AGA GE+ GLM+IRAYH+A GD +R   I+P SAHGTNPA+A + G + ++V ++  G +++E+L        +  + LM+T P+T G++E +I E+ +I    GG++Y DGAN+NA      PG
Sbjct:   52 SELDIMRHYTALSNRNHGVDSGFYPLGSCTMKYNPKINESVARFAGFANIHPLQDEKTVQGAMELMYDLQEHLIEITGMDTVTLQPAAGAHGEWTGLMLIRAYHEANGDFNRTKVIVPDSAHGTNPASATVAGFETITVKSNENGLVDLEDLKRVVN---EETAALMLTNPNTLGLFEENILEMAEIVHNAGGKLYYDGANLNAVLSQARPG 260          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_LEGPL (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Legionella pneumophila (strain Lens) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.741e-39
Identity = 85/212 (40.09%), Postives = 125/212 (58.96%), Query Frame = 1
Query:  133 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +E +++R+   L  K  S+  +  PLGSCTMK N        + P F N HP A  +++QG+ E    L  ++  ITG    SL P AG+ GE+AG+ +I+AYH++RGD  R+  +IP +AHGTNPA+A MCG K+V + T   G+I+++EL           + +M+T PST G++ R I EI  +  + GG +Y DGAN+NA      PG
Sbjct:   43 SELQVVRHFTCLSQKNFSIDTNFYPLGSCTMKYNPRGVHKAASLPGFINRHPLAMDNESQGFLETLYKLQNYISEITGMPGVSLTPMAGSQGEFAGVAMIKAYHQSRGDTARDEILIPDAAHGTNPASAVMCGFKVVEIATAPDGDIDLDELKRKVG---PRTAGIMLTNPSTLGLFMRQIKEIASLVHQAGGLLYYDGANLNAILGKVRPG 251          
The following BLAST results are available for this feature:
BLAST of EY665021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSPB_STAAB1.020e-3940.76Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_STAA91.020e-3940.76Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_STAA81.020e-3940.76Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_STAA31.020e-3940.76Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_STAA21.020e-3940.76Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_STAA11.020e-3940.76Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_BACCR1.333e-3940.09Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_BACC41.333e-3940.09Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_BACC21.333e-3940.09Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_LEGPL1.741e-3940.09Probable glycine dehydrogenase [decarboxylating] s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665021 ID=EY665021; Name=EY665021; organism=Citrus sinensis; type=EST; length=770bp
TAGTTTTTTCTGGGGGCAAATCATTTCCATTCACTCGCTGCATCTCTGGC
TGAAGAGGTTGAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGT
ATCTGACACATCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTT
AGATACATTCATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTAT
GATTCCATTGGGATCTTGTACAATGAAATTGAATGCAACAACTGAAATGA
TGCCAGTGACATGGCCTAGCTTTGCTAACATACACCCTTTTGCCCCTGCT
GACCAGGCTCAGGGTTATCAGGAAATGTTTAACAATCTGGGTGAGTGGCT
GTGTACCATTACTGGCTTTGACTCTTTCTCTTTGCAACCAAATGCTGGTG
CAGCTGGTGAGTATGCTGGGCTCATGGTTATCCGCGCTTATCATAAGGCA
AGAGGAGACCATCACCGCAATGTGTGCATTATACCCGTGTCAGCCCATGG
GACAAATCCTGCTACTGCTGCCATGTGTGGAATGAAGATTGTTTCTGTTG
GAACTGATGCCAAGGGTAACATCAACATTGAAGAGTTAATGAATGCCGCA
GAAGCTAATATGGACAACCTATCAACCCTTATGGTAACGTACCCTTCAAC
TCATGGAGTTTATGAAAGAAGTATTGATGAGATATGCAAGATAAATTCAC
GATATGGAGGTCAAGTATATATGGACGGGGCTAACATGAATGCTCANGGT
CGTCTGACAAGCCCTGGTTA
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