EY665021

Overview
NameEY665021
Unique NameEY665021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_RALEJ (Glycine dehydrogenase [decarboxylating] OS=Ralstonia eutropha (strain JMP134) GN=gcvP PE=3 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 8.816e-84
Identity = 144/255 (56.47%), Postives = 188/255 (73.73%), Query Frame = 1
Query:   19 NHFHSLAASLAEEV-----ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +H   L ASL  +      E A P+ L R S YLTHPVFN +H EHE+LRY+ +L  K+L+L  +MIPLGSCTMKLNAT+EM+PVTWP F+ IHPFAP DQ  GY+EM + L   LC  TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HR++C+IP SAHGTNPA+A M GMK+V V  D  GN+++E+L   AE +  NL+ +M+TYPSTHGV+E+ + +IC+I  ++GGQVY+DGANMNA     +PG
Sbjct:  455 SHGKPLPASLTFDAIEAAAEDAFPANLARTSAYLTHPVFNTHHAEHEMLRYLRMLADKDLALDRTMIPLGSCTMKLNATSEMIPVTWPEFSQIHPFAPLDQTVGYREMIDQLEAMLCAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGESHRDICLIPSSAHGTNPASAQMAGMKVVVVACDENGNVDLEDLAKKAELHSKNLAAIMITYPSTHGVFEQGVQQICEIVHQHGGQVYVDGANMNAMVGTAAPG 709          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_DECAR (Glycine dehydrogenase [decarboxylating] OS=Dechloromonas aromatica (strain RCB) GN=gcvP PE=3 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 8.816e-84
Identity = 145/236 (61.44%), Postives = 179/236 (75.85%), Query Frame = 1
Query:   61 ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            ++A+P  L R    L HPVFN +HTEHE+LRY+  LQ+K+L+L HSMI LGSCTMKLNAT+EM+PVTWP F  IHPFAP DQA GY EM  +L EWL T+TGFD+  +QPN+GA GEYAGL+ I  +H +RG+ HRNVC+IP SAHGTNPATA M  MK+V V  D  GN+++ +L   AE + D+L+ LM+TYPSTHGV+E +I +IC I    GGQVYMDGAN+NA   LTSPG
Sbjct:  459 DSALPDSLIRSDAVLQHPVFNTHHTEHEMLRYLKSLQNKDLALDHSMISLGSCTMKLNATSEMIPVTWPEFGGIHPFAPRDQAVGYLEMITSLTEWLKTVTGFDAICMQPNSGAQGEYAGLVAIDRFHASRGEEHRNVCLIPKSAHGTNPATAQMANMKVVVVDCDENGNVDVADLKAKAEEHKDDLACLMITYPSTHGVFEEAIRDICAIVHANGGQVYMDGANLNAQVGLTSPG 694          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_BURPP (Glycine dehydrogenase [decarboxylating] OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=gcvP PE=3 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 8.816e-84
Identity = 145/246 (58.94%), Postives = 188/246 (76.42%), Query Frame = 1
Query:   31 SLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +L A LA     ++P+ L R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLGSCTMKLNAT+EM+PVTWP F  IHPFAPA+Q  GY+EM + L E L   TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HRNVC+IP SAHGTNPA+A M GM++V V  DA+GN++IE+L   A  + D L+ +M+TYPSTHGV+E+++ EIC+I   +GGQVY+DGANMNA   LT+PG
Sbjct:  468 ALDAKLAASNTASVPAALERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGQIHPFAPAEQTVGYREMIDQLEEMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGEAHRNVCLIPASAHGTNPASAQMAGMQVVVVACDAQGNVDIEDLKKKAGQHADKLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTAPG 713          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_STRM5 (Glycine dehydrogenase [decarboxylating] OS=Stenotrophomonas maltophilia (strain R551-3) GN=gcvP PE=3 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.151e-83
Identity = 144/246 (58.54%), Postives = 189/246 (76.83%), Query Frame = 1
Query:   31 SLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +L AS A+    A+P+GL R+S +LTHPVFN +H+EHELLRY+  L  K+L++  +MIPLGSCTMKLNAT EM+PVTWP F+ IHP  PADQA GY+E+ ++L   L   TG+D+ SLQPN+GA GEYAGL+ IRAYH++RG+ HR++C+IP SAHGTNPA+A MCGMK+V   TDA GN+++E++   AE   D L+ +M+TYPSTHGV+E  + EIC+I  ++GGQVY DGANMNA   +  PG
Sbjct:  448 ALDASTAD----ALPAGLLRQSEFLTHPVFNTHHSEHELLRYLRSLADKDLAMDRTMIPLGSCTMKLNATAEMIPVTWPEFSQIHPLVPADQALGYKELIDSLEAMLVECTGYDAVSLQPNSGAQGEYAGLLAIRAYHRSRGEDHRDICLIPDSAHGTNPASAQMCGMKVVVTKTDANGNVDVEDIRLNAEKYSDRLAAIMMTYPSTHGVFEEEVVEICEIIHKHGGQVYTDGANMNALVGVAKPG 689          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_SHEAM (Glycine dehydrogenase [decarboxylating] OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=gcvP PE=3 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.151e-83
Identity = 143/256 (55.86%), Postives = 193/256 (75.39%), Query Frame = 1
Query:   10 LGANHFHSLAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            LGA H   +AA  A+ +    ++IP+ L RE  +LTHP FN YH+E E++RYI  L++K+L+L HSMI LGSCTMKLNA  EM+PV+WP FAN+HPF P++QAQGY ++   L +WL  ITG+D+  +QPN+GA GEYAGL+ IR YH++RG+ HR+VC+IP SAHGTNPA+A + GMK+V    D +GN+++++L   A    +NLS +M+TYPSTHGVYE ++ EIC I  ++GGQVY+DGANMNA   LT+PG
Sbjct:  441 LGAGHGLDVAAIDADILAKGSSSIPAALVREEAFLTHPTFNSYHSETEMMRYIKRLENKDLALNHSMISLGSCTMKLNAAVEMIPVSWPEFANMHPFCPSEQAQGYTQLIGELSDWLVDITGYDAVCMQPNSGAQGEYAGLLAIRKYHESRGEGHRDVCLIPQSAHGTNPASAQLAGMKVVVTACDKQGNVDLDDLRAKAAEVAENLSCIMITYPSTHGVYEETVREICDIIHQHGGQVYLDGANMNAQVGLTAPG 696          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_LEPBL (Glycine dehydrogenase [decarboxylating] OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=gcvP PE=3 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.151e-83
Identity = 145/233 (62.23%), Postives = 179/233 (76.82%), Query Frame = 1
Query:   70 IPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            I     R + YLTHPVF  +HTE ++LRYI  L+S++LSL  SMIPLGSCTMKLNATTEM PVTWP F  IHPFAP++Q +GY+ +F  L +WLC ITGF   SLQPNAG+ GEYAGL+ IR YH++R + HRNVC+IP+SAHGTNPA+AAM G K+V V  D  GN+++E+L   AE + ++L+ LM+TYPSTHGV+E S+ EIC+I    GGQVYMDGANMNA   LTSPG
Sbjct:  468 ISDSFKRSTSYLTHPVFQSFHTETKMLRYIRKLESRDLSLTTSMIPLGSCTMKLNATTEMYPVTWPEFGAIHPFAPSEQTKGYKIIFEQLEKWLCEITGFAGVSLQPNAGSQGEYAGLLAIRRYHESRKETHRNVCLIPISAHGTNPASAAMAGFKVVVVSCDQNGNVDLEDLKIKAEEHKNDLAALMITYPSTHGVFEESVKEICQIVHSRGGQVYMDGANMNAQVGLTSPG 700          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_LEPBJ (Glycine dehydrogenase [decarboxylating] OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=gcvP PE=3 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.151e-83
Identity = 145/233 (62.23%), Postives = 179/233 (76.82%), Query Frame = 1
Query:   70 IPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            I     R + YLTHPVF  +HTE ++LRYI  L+S++LSL  SMIPLGSCTMKLNATTEM PVTWP F  IHPFAP++Q +GY+ +F  L +WLC ITGF   SLQPNAG+ GEYAGL+ IR YH++R + HRNVC+IP+SAHGTNPA+AAM G K+V V  D  GN+++E+L   AE + ++L+ LM+TYPSTHGV+E S+ EIC+I    GGQVYMDGANMNA   LTSPG
Sbjct:  468 ISDSFKRSTSYLTHPVFQSFHTETKMLRYIRKLESRDLSLTTSMIPLGSCTMKLNATTEMYPVTWPEFGAIHPFAPSEQTKGYKIIFEQLEKWLCEITGFAGVSLQPNAGSQGEYAGLLAIRRYHESRKETHRNVCLIPISAHGTNPASAAMAGFKVVVVSCDQNGNVDLEDLKIKAEEHKNDLAALMITYPSTHGVFEESVKEICQIVHSRGGQVYMDGANMNAQVGLTSPG 700          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_VIBFM (Glycine dehydrogenase [decarboxylating] OS=Vibrio fischeri (strain MJ11) GN=gcvP PE=3 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.964e-83
Identity = 144/246 (58.54%), Postives = 183/246 (74.39%), Query Frame = 1
Query:   31 SLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +L+A + ++   AIP    R S +LTHPVFN YH+E ++LRY+  L++K+ SL H MIPLGSCTMKLNA  EM+PVTWP F  IHPFAP +QA GY  +  +L   LC ITG+D FSLQPN+GA+GEYAGL+ I+ YH++RGD HRNVC+IP SAHGTNPATA+M  MK+V V  D  GNI++ +L    E + +NLS++M+TYPSTHGVYE  + E+C +    GGQVY+DGANMNA   LTSPG
Sbjct:  447 TLSAEVGKDEFAAIPKHCQRTSSFLTHPVFNTYHSETQMLRYLKKLENKDFSLTHGMIPLGSCTMKLNAVAEMLPVTWPEFGGIHPFAPLNQAAGYTTLATSLKSMLCEITGYDEFSLQPNSGASGEYAGLIAIQRYHESRGDAHRNVCLIPSSAHGTNPATASMVSMKVVVVKCDENGNIDMIDLAEKIEKHQENLSSIMITYPSTHGVYEEQVREVCDMVHAAGGQVYLDGANMNAQVGLTSPG 692          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_VIBF1 (Glycine dehydrogenase [decarboxylating] OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=gcvP PE=3 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.964e-83
Identity = 144/246 (58.54%), Postives = 183/246 (74.39%), Query Frame = 1
Query:   31 SLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +L+A + ++   AIP    R S +LTHPVFN YH+E ++LRY+  L++K+ SL H MIPLGSCTMKLNA  EM+PVTWP F  IHPFAP +QA GY  +  +L   LC ITG+D FSLQPN+GA+GEYAGL+ I+ YH++RGD HRNVC+IP SAHGTNPATA+M  MK+V V  D  GNI++ +L    E + +NLS++M+TYPSTHGVYE  + E+C +    GGQVY+DGANMNA   LTSPG
Sbjct:  447 TLSAEVGKDEFAAIPKHCQRTSSFLTHPVFNTYHSETQMLRYLKKLENKDFSLTHGMIPLGSCTMKLNAVAEMLPVTWPEFGGIHPFAPLNQAAGYTTLATSLKSMLCEITGYDEFSLQPNSGASGEYAGLIAIQRYHESRGDAHRNVCLIPSSAHGTNPATASMVSMKVVVVKCDENGNIDMIDLAEKIEKHQENLSSIMITYPSTHGVYEEQVREVCDMVHAAGGQVYLDGANMNAQVGLTSPG 692          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_STRMK (Glycine dehydrogenase [decarboxylating] OS=Stenotrophomonas maltophilia (strain K279a) GN=gcvP PE=3 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.964e-83
Identity = 144/246 (58.54%), Postives = 188/246 (76.42%), Query Frame = 1
Query:   31 SLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +L AS A+    A+P+GL R+S +LTHPVFN +H+EHELLRY+  L  K+L++  +MIPLGSCTMKLNAT EM+PVTWP F+ IHP  PADQA GY+E+ + L   L   TG+D+ SLQPN+GA GEYAGL+ IRAYH++RG+ HR++C+IP SAHGTNPA+A MCGMK+V   TDA GN+++E++   AE   D L+ +M+TYPSTHGV+E  + EIC+I  ++GGQVY DGANMNA   +  PG
Sbjct:  448 ALDASTAD----ALPAGLLRQSAFLTHPVFNTHHSEHELLRYLRSLADKDLAMDRTMIPLGSCTMKLNATAEMIPVTWPEFSQIHPLVPADQALGYKELIDTLEAMLVECTGYDAVSLQPNSGAQGEYAGLLAIRAYHRSRGEGHRDICLIPDSAHGTNPASAQMCGMKVVVTKTDANGNVDVEDIRLNAEKYSDRLAAIMMTYPSTHGVFEEEVVEICEIIHKHGGQVYTDGANMNALVGVAKPG 689          
The following BLAST results are available for this feature:
BLAST of EY665021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSP_RALEJ8.816e-8456.47Glycine dehydrogenase [decarboxylating] OS=Ralston... [more]
GCSP_DECAR8.816e-8461.44Glycine dehydrogenase [decarboxylating] OS=Dechlor... [more]
GCSP_BURPP8.816e-8458.94Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_STRM51.151e-8358.54Glycine dehydrogenase [decarboxylating] OS=Stenotr... [more]
GCSP_SHEAM1.151e-8355.86Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_LEPBL1.151e-8362.23Glycine dehydrogenase [decarboxylating] OS=Leptosp... [more]
GCSP_LEPBJ1.151e-8362.23Glycine dehydrogenase [decarboxylating] OS=Leptosp... [more]
GCSP_VIBFM1.964e-8358.54Glycine dehydrogenase [decarboxylating] OS=Vibrio ... [more]
GCSP_VIBF11.964e-8358.54Glycine dehydrogenase [decarboxylating] OS=Vibrio ... [more]
GCSP_STRMK1.964e-8358.54Glycine dehydrogenase [decarboxylating] OS=Stenotr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665021 ID=EY665021; Name=EY665021; organism=Citrus sinensis; type=EST; length=770bp
TAGTTTTTTCTGGGGGCAAATCATTTCCATTCACTCGCTGCATCTCTGGC
TGAAGAGGTTGAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGT
ATCTGACACATCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTT
AGATACATTCATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTAT
GATTCCATTGGGATCTTGTACAATGAAATTGAATGCAACAACTGAAATGA
TGCCAGTGACATGGCCTAGCTTTGCTAACATACACCCTTTTGCCCCTGCT
GACCAGGCTCAGGGTTATCAGGAAATGTTTAACAATCTGGGTGAGTGGCT
GTGTACCATTACTGGCTTTGACTCTTTCTCTTTGCAACCAAATGCTGGTG
CAGCTGGTGAGTATGCTGGGCTCATGGTTATCCGCGCTTATCATAAGGCA
AGAGGAGACCATCACCGCAATGTGTGCATTATACCCGTGTCAGCCCATGG
GACAAATCCTGCTACTGCTGCCATGTGTGGAATGAAGATTGTTTCTGTTG
GAACTGATGCCAAGGGTAACATCAACATTGAAGAGTTAATGAATGCCGCA
GAAGCTAATATGGACAACCTATCAACCCTTATGGTAACGTACCCTTCAAC
TCATGGAGTTTATGAAAGAAGTATTGATGAGATATGCAAGATAAATTCAC
GATATGGAGGTCAAGTATATATGGACGGGGCTAACATGAATGCTCANGGT
CGTCTGACAAGCCCTGGTTA
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