EY665021

Overview
NameEY665021
Unique NameEY665021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_THEMA (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Thermotoga maritima GN=gcvPB PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.013e-36
Identity = 84/236 (35.59%), Postives = 128/236 (54.24%), Query Frame = 1
Query:   61 ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            E ++P    R +P     V     +E +L+R+   L  K  S+   + PLGSCTMK N            F  IHP+ P +  QG   +   L + LC ITG D  +LQP AGA GE  G++++R Y K RGD  R   ++P SAHGTNPA+A+M G ++V +     G +++E+L    +   + ++ +M+T P+T G++E+ I +I ++    G  +Y DGAN+NA      PG
Sbjct:   23 EYSLPDRFLRRTPPELPEV-----SEPDLVRHYTNLARKNYSVDLGIYPLGSCTMKYNPKLNEKAANLEGFREIHPYQPVETVQGSLRLMYELKKMLCEITGMDDMTLQPAAGAHGELTGMLIVREYFKNRGDTGRKKVLVPDSAHGTNPASASMVGFEVVEI-KSKNGMVDVEDLKKLLD---EEVAAVMLTNPNTLGLFEKDILKIAEMTHECGALLYYDGANLNAIMGKVRPG 249          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_CHLPD (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Chlorobium phaeobacteroides (strain DSM 266) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.241e-36
Identity = 89/237 (37.55%), Postives = 133/237 (56.12%), Query Frame = 1
Query:   58 VETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            V   IPS   R +P     V      E E++R+   L +    +  +M PLGSCTMK N          P F+ +HP  P++  QG   +   L   L  I G  + SLQP AGA GE  G+++I+ YH+A+G   RN  ++  SAHGTNPA+AA+ G +I+SV ++A G  ++E+L    ++   +++ LM+T P+T G++E+ I  I ++    G  +YMDGANMNA   +T PG
Sbjct:   29 VAAVIPSKFLRTTPAELPEV-----PESEVVRHFIRLSNLNYHVDKNMYPLGSCTMKYNPKVNDYTCDLPGFSTLHPLQPSETTQGALRLMYELSSMLSEIAGMAAVSLQPAAGAHGELTGILLIKKYHEAQG-KMRNKLLVVDSAHGTNPASAAIAGYEIISVRSNADGRTDLEDLKARLQS---DVAALMLTNPNTIGLFEKDILAIERMVHENGSLLYMDGANMNALLGITRPG 256          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_KOSOT (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Kosmotoga olearia (strain TBF 19.5.1) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.940e-36
Identity = 76/212 (35.85%), Postives = 128/212 (60.38%), Query Frame = 1
Query:  133 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +E +++R+   L  K  S+ +   PLGSCTMK N            F+ +HP+ P ++ QG  E+   L   L  ITG D+F+LQP AGA GE  G+++++ Y + +G++ R   I+P SAHGTNPA+A+M G ++V + ++  G I+++ L  A +   ++++ +M+T P+T G++E+ I +I ++  + G  +Y DGAN+NA      PG
Sbjct:   46 SEIDVVRHYTELTRKNYSVDNGFYPLGSCTMKYNPKLNEKIAALEGFSLLHPYEPIEKVQGALEVMYRLQTLLSEITGMDAFTLQPAAGAHGELTGMLIVKKYFEVKGENQRTKVIVPDSAHGTNPASASMAGFQVVEIKSNDNGIIDLDNLEAALD---ESVAAIMLTNPNTLGLFEKDIIKIAEMAHKNGTLLYYDGANLNAIMGKVRPG 254          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_FRATW (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.940e-36
Identity = 84/211 (39.81%), Postives = 116/211 (54.98%), Query Frame = 1
Query:  136 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            E +++R+   L  K   +  +  PLGSCTMK N        +   F   HP+A A   QG  E   +L   +  +TG    SL P AGA GE+AG+ +I+AYH  R D  R+  I+P +AHGTNPATA +CG+K++ + T   G+I+IE L           + +M+T PST GV+ER+I  I K     GG +Y DGAN+NA      PG
Sbjct:   43 ELDVVRHYTQLSRKNFCIDTNFYPLGSCTMKYNPRAAHKYASLAGFLERHPYASAQSVQGTLECLYDLQNLIKELTGMTGVSLAPMAGAQGEFAGVAMIKAYHHKRSDFERDEIIVPDAAHGTNPATAKVCGLKVIEIPTKKDGDIDIEALDKVLG---PKTAGIMLTNPSTVGVFERNIAVIAKKVHEAGGLLYYDGANLNAIMGKARPG 250          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_FRATM (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.940e-36
Identity = 84/211 (39.81%), Postives = 116/211 (54.98%), Query Frame = 1
Query:  136 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            E +++R+   L  K   +  +  PLGSCTMK N        +   F   HP+A A   QG  E   +L   +  +TG    SL P AGA GE+AG+ +I+AYH  R D  R+  I+P +AHGTNPATA +CG+K++ + T   G+I+IE L           + +M+T PST GV+ER+I  I K     GG +Y DGAN+NA      PG
Sbjct:   43 ELDVVRHYTQLSRKNFCIDTNFYPLGSCTMKYNPRAAHKYASLAGFLERHPYASAQSVQGTLECLYDLQNLIKELTGMTGVSLAPMAGAQGEFAGVAMIKAYHHKRSDFERDEIIVPDAAHGTNPATAKVCGLKVIEIPTKKDGDIDIEALDKVLG---PKTAGIMLTNPSTVGVFERNIAVIAKKVHEAGGLLYYDGANLNAIMGKARPG 250          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_CHLCH (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Chlorobium chlorochromatii (strain CaD3) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.168e-35
Identity = 84/237 (35.44%), Postives = 131/237 (55.27%), Query Frame = 1
Query:   58 VETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +E+ IP+ L R+       V      E+E++R+   L +    +  +M PLGSCTMK N            F+ +HP  P    QG  ++   L   L  I G    SLQP AGA GE  G+++I+ YH+ RGD    + ++  SAHGTNPA+AA+ G + +SV ++  G  ++E+L +  +    +++ LM+T P+T G++E+ I +I ++    G  +YMDGANMNA   +T PG
Sbjct:   29 LESIIPASLLRKEAVELPEV-----AENEVVRHFVRLSNLNYHVDKNMYPLGSCTMKYNPKVNDYTCDLSGFSALHPLQPTSTTQGALQLMYELSNMLAEIAGMAGVSLQPAAGAHGELTGILLIKKYHEVRGDKRHKLLVVD-SAHGTNPASAALAGYETISVKSNGDGRTDLEDLRSKLDG---DVAALMLTNPNTIGLFEKEIVQIAEMVHANGSLLYMDGANMNALLGITRPG 256          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_CHLL2 (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.992e-35
Identity = 87/238 (36.55%), Postives = 131/238 (55.04%), Query Frame = 1
Query:   58 VETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMD-NLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +ET +P+   R  P     V      E E++R+   L +    +  +M PLGSCTMK N            F+ +HP  P    QG  +M   L   L  I G  + +LQP AGA GE  G+++I+ YH+ARG     + ++  SAHGTNPA+AA+ G +I+SV ++A G  ++ +L    +A +D  ++ LM+T P+T G++E+ I  I ++    G  +YMDGANMNA   +T PG
Sbjct:   29 IETVLPAKFLRTEPADLPEV-----PESEVVRHFIRLSNMNYHVDKNMYPLGSCTMKYNPKVNDAACDLAGFSELHPLQPEKTVQGALQMMYELSGMLAEIAGMSAVTLQPAAGAHGELTGILLIKKYHEARGSKRSKLLVVD-SAHGTNPASAAIAGYEIISVSSNADGRTDLGDL----KAKLDGEVAALMLTNPNTIGLFEKDILTIAQMVHENGSLLYMDGANMNALLGITRPG 256          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_AERPE (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Aeropyrum pernix GN=gcvPB PE=3 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.992e-35
Identity = 89/234 (38.03%), Postives = 127/234 (54.27%), Query Frame = 1
Query:   70 IPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-HHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +P  L R SP     V     +E E++R+   L      + +  +PLGSCTMK N          P    +HP    +  QG  E    + EWL  ITG D+ ++ P AG+ GE AG+++I+ +H+ RGD   R V I+P SAHGTNPA+AAM G ++V V T   GN+++E L  A      + + LM+T PST G++E +I EI ++    GG +Y DGAN+N       PG
Sbjct:   41 LPQSLARGSPPSLPEV-----SEVEVVRHYTRLSQMAYGVDNGPVPLGSCTMKYNPRVAARLAFDPRLETLHPLQDDETVQGVLEAIYMVQEWLRHITGMDACTVHPAAGSQGELAGVLMIKRFHEMRGDLDKRRVIIVPDSAHGTNPASAAMGGFQVVEVPTGDDGNVDMEALKAAVGG---DTAGLMITNPSTLGLFEENILEISRLVHEAGGLLYYDGANLNGIIGRARPG 266          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_OCEIH (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Oceanobacillus iheyensis GN=gcvPB PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.397e-35
Identity = 85/238 (35.71%), Postives = 134/238 (56.30%), Query Frame = 1
Query:   55 EVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            ++E  + S   R++P     V     +E +++R+   L ++   +     PLGSCTMK N            F++IHP+      QG   M  +L E L  ITG    SLQ  AGA GE+  LM+IRA+H++RGD+ R   I+P SAHGTNPA+AA+ G + V+V ++ +G +++++L        ++ + LM+T P+T G++E+ I  + +I    GG++Y DGAN+NA      PG
Sbjct:   31 DLEAELGSEYVRQTPPELPEV-----SELDIIRHYTGLSNRNYGVDSGFYPLGSCTMKYNPKINEDIARLDGFSHIHPYQDVSTVQGAMAMMFDLQESLKEITGMHEVSLQSAAGAQGEWTALMMIRAFHESRGDYGRTKVIVPDSAHGTNPASAAVAGFEAVTVKSNQEGLVDLDDLRQVVG---EDTAALMLTNPNTLGLFEKDILTMAEIVHEAGGKLYYDGANLNAIMGYVRPG 260          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_THENN (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.568e-35
Identity = 76/212 (35.85%), Postives = 119/212 (56.13%), Query Frame = 1
Query:  133 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +E +++R+   L  K  ++   + PLGSCTMK N          P F N+HP  P +  QG  ++   L   LC ITG D  +LQP AGA GE  G+++++ +   R D  R   ++P SAHGTNPA+A+M G ++V +     G +++E+L    +   D ++ +M+T P+T G++ER I +I ++    G  +Y DGAN+NA      PG
Sbjct:   42 SEPDVVRHYTELARKNYAVDVGIYPLGSCTMKYNPKLNERTANLPGFRNVHPLQPEETLQGCLQLMYELKAMLCEITGMDDMTLQPAAGAHGELTGMLIVKKFFDDRKDTKRKKVLVPDSAHGTNPASASMVGFEVVEI-KSKNGMVDVEDLRKHLD---DEVAAVMLTNPNTLGLFERDILKIAELTHNCGALLYYDGANLNAIMGKVKPG 249          
The following BLAST results are available for this feature:
BLAST of EY665021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSPB_THEMA4.013e-3635.59Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_CHLPD5.241e-3637.55Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_KOSOT8.940e-3635.85Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_FRATW8.940e-3639.81Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_FRATM8.940e-3639.81Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_CHLCH1.168e-3535.44Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_CHLL21.992e-3536.55Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_AERPE1.992e-3538.03Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_OCEIH3.397e-3535.71Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_THENN7.568e-3535.85Probable glycine dehydrogenase [decarboxylating] s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665021 ID=EY665021; Name=EY665021; organism=Citrus sinensis; type=EST; length=770bp
TAGTTTTTTCTGGGGGCAAATCATTTCCATTCACTCGCTGCATCTCTGGC
TGAAGAGGTTGAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGT
ATCTGACACATCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTT
AGATACATTCATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTAT
GATTCCATTGGGATCTTGTACAATGAAATTGAATGCAACAACTGAAATGA
TGCCAGTGACATGGCCTAGCTTTGCTAACATACACCCTTTTGCCCCTGCT
GACCAGGCTCAGGGTTATCAGGAAATGTTTAACAATCTGGGTGAGTGGCT
GTGTACCATTACTGGCTTTGACTCTTTCTCTTTGCAACCAAATGCTGGTG
CAGCTGGTGAGTATGCTGGGCTCATGGTTATCCGCGCTTATCATAAGGCA
AGAGGAGACCATCACCGCAATGTGTGCATTATACCCGTGTCAGCCCATGG
GACAAATCCTGCTACTGCTGCCATGTGTGGAATGAAGATTGTTTCTGTTG
GAACTGATGCCAAGGGTAACATCAACATTGAAGAGTTAATGAATGCCGCA
GAAGCTAATATGGACAACCTATCAACCCTTATGGTAACGTACCCTTCAAC
TCATGGAGTTTATGAAAGAAGTATTGATGAGATATGCAAGATAAATTCAC
GATATGGAGGTCAAGTATATATGGACGGGGCTAACATGAATGCTCANGGT
CGTCTGACAAGCCCTGGTTA
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