EY665021

Overview
NameEY665021
Unique NameEY665021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_HALSA (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Halobacterium salinarium GN=gcvPB PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.692e-32
Identity = 85/240 (35.42%), Postives = 130/240 (54.17%), Query Frame = 1
Query:   58 VETAIPSGLTRES---PYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            V+ ++P  LTR++   P L  P         EL R+   L  +   +     PLGSCTMK N          P+ A +HP       QG   + ++L ++L  I G D+ +LQP AGAAGE+ G+++  AYH+A    HRN  I+P +AHGTN A+AA+ G  ++ + +   G ++++ L  A     +N + LM+T P+T G++ER I+ I ++    GG +Y DGAN+NA      PG
Sbjct:   31 VDPSLPDDLTRDTVELPSLEEP---------ELARHYVRLSQQNYGVDSGPYPLGSCTMKYNPRFTEDAAALPAAA-VHPDRSETALQGTLAVMHDLQDYLGRIGGMDAVTLQPPAGAAGEFTGILIAEAYHEATDGGHRNEVIVPDAAHGTNFASAALGGYDVIELPSGDDGRVDLDALEAALG---ENTAALMLTNPNTLGLFERDIEPIAEMVHDAGGLLYYDGANLNALLGRARPG 257          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_SULIY (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.279e-31
Identity = 85/241 (35.27%), Postives = 128/241 (53.11%), Query Frame = 1
Query:   49 AEEVETAIPSGLTRES-PYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +E  E  IP  L RE+ P L         +E E++R+   L      +   ++PLGSCTMK N   E          + HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++ +G ++++ L    E   D  +  M+T P+T G++E +I EI KI       +Y DGAN+N    +  PG
Sbjct:   36 SEIKEMKIPKNLLRENGPNLPSL------SELEVVRHFIRLSQMNFGVDVGIMPLGSCTMKYNPKIEEKATAITE--SHHPLEDEDHVQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEDHNRNYKDTMLVADTAHGTNPASAAMAGYKVMYVKSNGEGLVDMDIL---REIVNDKTAGFMLTNPNTLGLFEENILEISKIIHSANAILYYDGANLNGVLGIARPG 265          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_SULIN (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.279e-31
Identity = 85/241 (35.27%), Postives = 128/241 (53.11%), Query Frame = 1
Query:   49 AEEVETAIPSGLTRES-PYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +E  E  IP  L RE+ P L         +E E++R+   L      +   ++PLGSCTMK N   E          + HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++ +G ++++ L    E   D  +  M+T P+T G++E +I EI KI       +Y DGAN+N    +  PG
Sbjct:   36 SEIKEMKIPKNLLRENGPNLPSL------SELEVVRHFIRLSQMNFGVDVGIMPLGSCTMKYNPKIEEKATAITE--SHHPLEDEDHVQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEDHNRNYKDTMLVADTAHGTNPASAAMAGYKVMYVKSNGEGLVDMDIL---REIVNDKTAGFMLTNPNTLGLFEENILEISKIIHSANAILYYDGANLNGVLGIARPG 265          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_SULIM (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.279e-31
Identity = 85/241 (35.27%), Postives = 128/241 (53.11%), Query Frame = 1
Query:   49 AEEVETAIPSGLTRES-PYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +E  E  IP  L RE+ P L         +E E++R+   L      +   ++PLGSCTMK N   E          + HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++ +G ++++ L    E   D  +  M+T P+T G++E +I EI KI       +Y DGAN+N    +  PG
Sbjct:   36 SEIKEMKIPKNLLRENGPNLPSL------SELEVVRHFIRLSQMNFGVDVGIMPLGSCTMKYNPKIEEKATAITE--SHHPLEDEDHVQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEDHNRNYKDTMLVADTAHGTNPASAAMAGYKVMYVKSNGEGLVDMDIL---REIVNDKTAGFMLTNPNTLGLFEENILEISKIIHSANAILYYDGANLNGVLGIARPG 265          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_SULIL (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.279e-31
Identity = 85/241 (35.27%), Postives = 128/241 (53.11%), Query Frame = 1
Query:   49 AEEVETAIPSGLTRES-PYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +E  E  IP  L RE+ P L         +E E++R+   L      +   ++PLGSCTMK N   E          + HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++ +G ++++ L    E   D  +  M+T P+T G++E +I EI KI       +Y DGAN+N    +  PG
Sbjct:   36 SEIKEMKIPKNLLRENGPNLPSL------SELEVVRHFIRLSQMNFGVDVGIMPLGSCTMKYNPKIEEKATAITE--SHHPLEDEDHVQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEDHNRNYKDTMLVADTAHGTNPASAAMAGYKVMYVKSNGEGLVDMDIL---REIVNDKTAGFMLTNPNTLGLFEENILEISKIIHSANAILYYDGANLNGVLGIARPG 265          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_SULIK (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.279e-31
Identity = 85/241 (35.27%), Postives = 128/241 (53.11%), Query Frame = 1
Query:   49 AEEVETAIPSGLTRES-PYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +E  E  IP  L RE+ P L         +E E++R+   L      +   ++PLGSCTMK N   E          + HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++ +G ++++ L    E   D  +  M+T P+T G++E +I EI KI       +Y DGAN+N    +  PG
Sbjct:   36 SEIKEMKIPKNLLRENGPNLPSL------SELEVVRHFIRLSQMNFGVDVGIMPLGSCTMKYNPKIEEKATAITE--SHHPLEDEDHVQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEDHNRNYKDTMLVADTAHGTNPASAAMAGYKVMYVKSNGEGLVDMDIL---REIVNDKTAGFMLTNPNTLGLFEENILEISKIIHSANAILYYDGANLNGVLGIARPG 265          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_SULIA (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus islandicus (strain M.16.27) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.279e-31
Identity = 85/241 (35.27%), Postives = 128/241 (53.11%), Query Frame = 1
Query:   49 AEEVETAIPSGLTRES-PYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +E  E  IP  L RE+ P L         +E E++R+   L      +   ++PLGSCTMK N   E          + HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++ +G ++++ L    E   D  +  M+T P+T G++E +I EI KI       +Y DGAN+N    +  PG
Sbjct:   36 SEIKEMKIPKNLLRENGPNLPSL------SELEVVRHFIRLSQMNFGVDVGIMPLGSCTMKYNPKIEEKATAITE--SHHPLEDEDHVQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEDHNRNYKDTMLVADTAHGTNPASAAMAGYKVMYVKSNGEGLVDMDIL---REIVNDKTAGFMLTNPNTLGLFEENILEISKIIHSANAILYYDGANLNGVLGIARPG 265          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSPB_SULTO (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus tokodaii GN=gcvPB PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.076e-31
Identity = 80/241 (33.20%), Postives = 130/241 (53.94%), Query Frame = 1
Query:   46 LAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            L +E+   IP  L R+   L         +E E++R+   L      + + M+PLGSCTMK N   E          N+HP       QG  E+   + +WL  ITG D  SLQ  AGAAGE AG+++I+ YH+ +G  +R+  ++  +AHGTNPA+A+M   K++ + ++++G ++++ L    E   +  +  M+T P+T G++E +I +I K       ++Y DGAN+N    +  PG
Sbjct:   32 LKKEISINIPEKLRRKEIDLPEL------SELEVIRHFIRLSQMSFGVDNGMVPLGSCTMKYNPKIEEEAELLTQ--NLHPLQDDSTVQGILEVLYYMQKWLAEITGMDLCSLQVPAGAAGELAGVLMIKKYHETKGRGNRDEMLVADTAHGTNPASASMENFKVIYIKSNSEGLVDVDIL---KEIVSERTAGFMLTNPNTLGLFEENILDIAKYIHSVDAKLYYDGANLNGILGVVRPG 261          
The following BLAST results are available for this feature:
BLAST of EY665021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSPB_HALSA2.692e-3235.42Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULIY2.279e-3135.27Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULIN2.279e-3135.27Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULIM2.279e-3135.27Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULIL2.279e-3135.27Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULIK2.279e-3135.27Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULIA2.279e-3135.27Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULTO5.076e-3133.20Probable glycine dehydrogenase [decarboxylating] s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665021 ID=EY665021; Name=EY665021; organism=Citrus sinensis; type=EST; length=770bp
TAGTTTTTTCTGGGGGCAAATCATTTCCATTCACTCGCTGCATCTCTGGC
TGAAGAGGTTGAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGT
ATCTGACACATCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTT
AGATACATTCATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTAT
GATTCCATTGGGATCTTGTACAATGAAATTGAATGCAACAACTGAAATGA
TGCCAGTGACATGGCCTAGCTTTGCTAACATACACCCTTTTGCCCCTGCT
GACCAGGCTCAGGGTTATCAGGAAATGTTTAACAATCTGGGTGAGTGGCT
GTGTACCATTACTGGCTTTGACTCTTTCTCTTTGCAACCAAATGCTGGTG
CAGCTGGTGAGTATGCTGGGCTCATGGTTATCCGCGCTTATCATAAGGCA
AGAGGAGACCATCACCGCAATGTGTGCATTATACCCGTGTCAGCCCATGG
GACAAATCCTGCTACTGCTGCCATGTGTGGAATGAAGATTGTTTCTGTTG
GAACTGATGCCAAGGGTAACATCAACATTGAAGAGTTAATGAATGCCGCA
GAAGCTAATATGGACAACCTATCAACCCTTATGGTAACGTACCCTTCAAC
TCATGGAGTTTATGAAAGAAGTATTGATGAGATATGCAAGATAAATTCAC
GATATGGAGGTCAAGTATATATGGACGGGGCTAACATGAATGCTCANGGT
CGTCTGACAAGCCCTGGTTA
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