EY665021

Overview
NameEY665021
Unique NameEY665021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_RALME (Glycine dehydrogenase [decarboxylating] OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=gcvP PE=3 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 3.350e-83
Identity = 138/242 (57.02%), Postives = 183/242 (75.62%), Query Frame = 1
Query:   43 SLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            ++   V+   P+ L R+S YLTHPVFN +H EHE+LRY+  L  K+L+L  +MIPLGSCTMKLNAT+EM+PVTWP F+NIHPFAP DQ  GY+EM + L   LC  TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HR++C+IP SAHGTNPA+A M GMK+V V  D  GN+++ +L   AE +  NL+ +M+TYPSTHGV+E+ + +IC I  ++GGQVY+DGANMNA   + +PG
Sbjct:  466 TIEASVQDGFPATLARQSAYLTHPVFNTHHAEHEMLRYLRALADKDLALDRTMIPLGSCTMKLNATSEMIPVTWPEFSNIHPFAPLDQTVGYREMIDQLEAMLCAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGESHRDICLIPSSAHGTNPASAQMAGMKVVVVACDENGNVDLADLAKKAEQHSKNLAAIMITYPSTHGVFEQGVQQICDIVHKHGGQVYVDGANMNAMVGVAAPG 707          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_PSEU5 (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas stutzeri (strain A1501) GN=gcvP PE=3 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 3.350e-83
Identity = 146/253 (57.71%), Postives = 186/253 (73.52%), Query Frame = 1
Query:    7 FLGANHFHSLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSP 765
            FLGA+H   +AA  A E+   IP+GL R+S YL HPVFN +H+E E+LRY+  L++K+L+L  +MIPLGSCTMKLNAT+EM+P+TW  FAN+HPF P  QAQGY+ M   L  WLC ITGFD+ S+QPN+GA GEYAGL+ IR YH++RG+  R++C+IP SAHGTNPA+A M  M++V V  D  GN+++E+L   A    D LS LM+TYPSTHGVYE ++ EIC      GGQVYMDGAN+NA   L  P
Sbjct:  441 FLGADHGLDVAALDAGELAAGIPAGLQRDSGYLEHPVFNSHHSETEMLRYLKQLENKDLALNQAMIPLGSCTMKLNATSEMIPITWAEFANLHPFVPRGQAQGYRLMIEELEAWLCAITGFDAISMQPNSGAQGEYAGLVAIRKYHESRGEGQRDICLIPSSAHGTNPASAQMVSMRVVIVECDKGGNVDLEDLKRKAAEAGDRLSCLMITYPSTHGVYEENVREICAAIHAQGGQVYMDGANLNAQVGLARP 693          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_CITK8 (Glycine dehydrogenase [decarboxylating] OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=gcvP PE=3 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 3.350e-83
Identity = 137/234 (58.55%), Postives = 181/234 (77.35%), Query Frame = 1
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA  EM+P+TWP FA +HPF PA+QA+GY +M N L +WL  +TG+D+  +QPN+GA GEYAGL+ IR YH++R D HR++C+IP SAHGTNPA+A M GM++V V  D  GNI++ +L   AE   DNLS +MVTYPSTHGVYE +I E+C+I  ++GGQVY+DGANMNA   +TSPG
Sbjct:  462 SIQESMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPAEQAEGYHQMINQLSDWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNDGHRDICLIPASAHGTNPASAQMAGMQVVVVACDKNGNIDLADLRAKAEQAGDNLSCIMVTYPSTHGVYEETIREVCEIVHQFGGQVYLDGANMNAQVGITSPG 695          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_ENTS8 (Glycine dehydrogenase [decarboxylating] OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=gcvP PE=3 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 4.375e-83
Identity = 137/234 (58.55%), Postives = 182/234 (77.78%), Query Frame = 1
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +IP+ + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA  EM+P+TWP FA +HPF PADQA+GY +M + L +WL  +TG+D+  +QPN+GA GEYAGL+ IR YH++R + HR++C+IP SAHGTNPA+A M GM++V V  D +GNI++ +L   AE   D LS +MVTYPSTHGVYE +I E+C I  +YGGQVY+DGANMNA   +TSPG
Sbjct:  462 SIPAAMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPADQAEGYLQMISQLSDWLVKLTGYDALCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPSSAHGTNPASAQMAGMQVVVVACDKQGNIDLADLRAKAETAGDKLSCIMVTYPSTHGVYEETIREVCDIVHQYGGQVYLDGANMNAQVGITSPG 695          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_VIBCM (Glycine dehydrogenase [decarboxylating] OS=Vibrio cholerae serotype O1 (strain M66-2) GN=gcvP PE=3 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 5.714e-83
Identity = 143/247 (57.89%), Postives = 187/247 (75.71%), Query Frame = 1
Query:   28 HSLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            H+L+  +A     AIP    R+S +LTHPVFN +H+E ++LRY+  L++K+ SL H MIPLGSCTMKLNAT EM+PVTWP F  +HPF P  QA GY  +  +L + LC ITG+D+FSLQPN+GA+GEYAGL+ I+ YH++RG+ HRNVC+IP SAHGTNPATAAM  MK+V V  D  GNI++ +L +  E + D+LS++M+TYPSTHGVYE+ + E+C++    GGQVY+DGANMNA   LTSPG
Sbjct:  445 HALSDRIATNELAAIPESCRRQSAFLTHPVFNTHHSETQMLRYMKHLENKDFSLTHGMIPLGSCTMKLNATAEMIPVTWPEFGALHPFVPKAQAAGYAALAEDLKQKLCEITGYDAFSLQPNSGASGEYAGLVAIQRYHQSRGEGHRNVCLIPSSAHGTNPATAAMVSMKVVVVKCDENGNIDMVDLADKIEKHKDHLSSIMITYPSTHGVYEQQVREVCEMVHAAGGQVYLDGANMNAQVGLTSPG 691          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_VIBC3 (Glycine dehydrogenase [decarboxylating] OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=gcvP PE=3 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 5.714e-83
Identity = 143/247 (57.89%), Postives = 187/247 (75.71%), Query Frame = 1
Query:   28 HSLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            H+L+  +A     AIP    R+S +LTHPVFN +H+E ++LRY+  L++K+ SL H MIPLGSCTMKLNAT EM+PVTWP F  +HPF P  QA GY  +  +L + LC ITG+D+FSLQPN+GA+GEYAGL+ I+ YH++RG+ HRNVC+IP SAHGTNPATAAM  MK+V V  D  GNI++ +L +  E + D+LS++M+TYPSTHGVYE+ + E+C++    GGQVY+DGANMNA   LTSPG
Sbjct:  445 HALSDRIATNELAAIPESCRRQSAFLTHPVFNTHHSETQMLRYMKHLENKDFSLTHGMIPLGSCTMKLNATAEMIPVTWPEFGALHPFVPKAQAAGYAALAEDLKQKLCEITGYDAFSLQPNSGASGEYAGLVAIQRYHQSRGEGHRNVCLIPSSAHGTNPATAAMVSMKVVVVKCDENGNIDMVDLADKIEKHKDHLSSIMITYPSTHGVYEQQVREVCEMVHAAGGQVYLDGANMNAQVGLTSPG 691          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_BURXL (Glycine dehydrogenase [decarboxylating] OS=Burkholderia xenovorans (strain LB400) GN=gcvP PE=3 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 5.714e-83
Identity = 142/246 (57.72%), Postives = 188/246 (76.42%), Query Frame = 1
Query:   31 SLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            +L +++A     ++P  L R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLGSCTMKLNAT+EM+PVTWP F  IHPFAPA+Q  GY+EM + L   L   TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HRNVC+IP SAHGTNPA+A M GM+++ V  DA+GN++IE+L   AE + D L+ +M+TYPSTHGV+E+++ EIC+I   +GGQVY+DGANMNA   LT+PG
Sbjct:  468 ALDSTIAASDTASVPPALERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGQIHPFAPAEQTVGYREMIDQLEAMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGEAHRNVCLIPASAHGTNPASAHMAGMQVIVVACDAQGNVDIEDLKKKAEQHADKLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTAPG 713          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_BURCH (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cenocepacia (strain HI2424) GN=gcvP PE=3 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 5.714e-83
Identity = 143/234 (61.11%), Postives = 184/234 (78.63%), Query Frame = 1
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            A+P+GL R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLGSCTMKLNAT+EM+PVTWP F  IHPFAPA+Q  GY+EM + L E L   TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HR+VC+IP SAHGTNPA+A M GMK+V V  DA+GN++I +L   AE +  NL+ +M+TYPSTHGV+E+++ EIC+I   +GGQVY+DGANMNA   LT+PG
Sbjct:  477 ALPAGLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGGIHPFAPAEQTVGYREMIDQLEEMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGEGHRDVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIADLKAKAEQHSANLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTAPG 710          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_BURCA (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cenocepacia (strain AU 1054) GN=gcvP PE=3 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 5.714e-83
Identity = 143/234 (61.11%), Postives = 184/234 (78.63%), Query Frame = 1
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            A+P+GL R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLGSCTMKLNAT+EM+PVTWP F  IHPFAPA+Q  GY+EM + L E L   TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HR+VC+IP SAHGTNPA+A M GMK+V V  DA+GN++I +L   AE +  NL+ +M+TYPSTHGV+E+++ EIC+I   +GGQVY+DGANMNA   LT+PG
Sbjct:  477 ALPAGLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGGIHPFAPAEQTVGYREMIDQLEEMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGEGHRDVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIADLKAKAEQHSANLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTAPG 710          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_SHEB9 (Glycine dehydrogenase [decarboxylating] OS=Shewanella baltica (strain OS195) GN=gcvP PE=3 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 7.463e-83
Identity = 142/256 (55.47%), Postives = 189/256 (73.83%), Query Frame = 1
Query:   10 LGANH---FHSLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            LGA H     +L A +  +   +IP+ L R+   L+HP FN+Y +E E++RYI  L+SK+L+L +SMI LGSCTMKLNA  EM+PV+WP FAN+HPF+P DQA+GY ++   L  WL  ITG+D+  +QPN+GA GEYAGL+ I+ YH++RGD HRN+C+IP SAHGTNPA+A + GM++V    D +GN+++E+L   A    +NLS +M+TYPSTHGVYE SI EIC I  ++GGQVY+DGANMNA   LTSPG
Sbjct:  441 LGAGHGLDVAALDAQIVSQGSQSIPAALVRQDAILSHPTFNRYQSETEMMRYIKRLESKDLALNYSMISLGSCTMKLNAAVEMLPVSWPEFANMHPFSPLDQAKGYTQLIEELSTWLVNITGYDAVCIQPNSGAQGEYAGLLAIKKYHESRGDAHRNICLIPQSAHGTNPASAQLAGMQVVVTACDKQGNVDLEDLKTKAAEVAENLSCIMITYPSTHGVYEESIREICDIVHQHGGQVYLDGANMNAQVGLTSPG 696          
The following BLAST results are available for this feature:
BLAST of EY665021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSP_RALME3.350e-8357.02Glycine dehydrogenase [decarboxylating] OS=Ralston... [more]
GCSP_PSEU53.350e-8357.71Glycine dehydrogenase [decarboxylating] OS=Pseudom... [more]
GCSP_CITK83.350e-8358.55Glycine dehydrogenase [decarboxylating] OS=Citroba... [more]
GCSP_ENTS84.375e-8358.55Glycine dehydrogenase [decarboxylating] OS=Enterob... [more]
GCSP_VIBCM5.714e-8357.89Glycine dehydrogenase [decarboxylating] OS=Vibrio ... [more]
GCSP_VIBC35.714e-8357.89Glycine dehydrogenase [decarboxylating] OS=Vibrio ... [more]
GCSP_BURXL5.714e-8357.72Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_BURCH5.714e-8361.11Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_BURCA5.714e-8361.11Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_SHEB97.463e-8355.47Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665021 ID=EY665021; Name=EY665021; organism=Citrus sinensis; type=EST; length=770bp
TAGTTTTTTCTGGGGGCAAATCATTTCCATTCACTCGCTGCATCTCTGGC
TGAAGAGGTTGAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGT
ATCTGACACATCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTT
AGATACATTCATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTAT
GATTCCATTGGGATCTTGTACAATGAAATTGAATGCAACAACTGAAATGA
TGCCAGTGACATGGCCTAGCTTTGCTAACATACACCCTTTTGCCCCTGCT
GACCAGGCTCAGGGTTATCAGGAAATGTTTAACAATCTGGGTGAGTGGCT
GTGTACCATTACTGGCTTTGACTCTTTCTCTTTGCAACCAAATGCTGGTG
CAGCTGGTGAGTATGCTGGGCTCATGGTTATCCGCGCTTATCATAAGGCA
AGAGGAGACCATCACCGCAATGTGTGCATTATACCCGTGTCAGCCCATGG
GACAAATCCTGCTACTGCTGCCATGTGTGGAATGAAGATTGTTTCTGTTG
GAACTGATGCCAAGGGTAACATCAACATTGAAGAGTTAATGAATGCCGCA
GAAGCTAATATGGACAACCTATCAACCCTTATGGTAACGTACCCTTCAAC
TCATGGAGTTTATGAAAGAAGTATTGATGAGATATGCAAGATAAATTCAC
GATATGGAGGTCAAGTATATATGGACGGGGCTAACATGAATGCTCANGGT
CGTCTGACAAGCCCTGGTTA
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