EY665021

Overview
NameEY665021
Unique NameEY665021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_RALPJ (Glycine dehydrogenase [decarboxylating] OS=Ralstonia pickettii (strain 12J) GN=gcvP PE=3 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 7.463e-83
Identity = 139/237 (58.65%), Postives = 180/237 (75.95%), Query Frame = 1
Query:   58 VETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            V  A P+ L R+S YLTHPVFN +H+EHE+LRY+  L  K+L+L  +MIPLGSCTMKLNAT EM+PVTWP F+NIHPFAPADQ  GY+EM + L + LC  TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HRNVC+IP SAHGTNPA+A M GM++V V  D +GN+++ +L   A  +  NL+ +M+TYPSTHGV+E  +  +C+I   +GGQVY+DGANMNA     +PG
Sbjct:  477 VADAYPASLVRQSAYLTHPVFNAHHSEHEMLRYLRSLADKDLALDRTMIPLGSCTMKLNATAEMLPVTWPEFSNIHPFAPADQTVGYREMIDQLEQMLCAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGEAHRNVCLIPSSAHGTNPASAQMAGMQVVVVACDERGNVDLADLEKKAAEHSKNLAAIMITYPSTHGVFEEGVKRVCEIVHSHGGQVYVDGANMNAMVGTAAPG 713          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_SHESH (Glycine dehydrogenase [decarboxylating] OS=Shewanella sediminis (strain HAW-EB3) GN=gcvP PE=3 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 9.747e-83
Identity = 144/256 (56.25%), Postives = 188/256 (73.44%), Query Frame = 1
Query:   10 LGANHFHSLAASLAEEVE---TAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            LG  H   +AA  AE ++   ++IP+ L R    LTHP FN YH+E E++RYI  L++K+L+L HSMI LGSCTMKLNA TEMMP++WP F N+HPF P DQ++GY ++   L  WL  ITG+D+  +Q N+GA+GEYAGL+ IR YH +RGD HRNVC+IP SAHGTNPA+A M GMKIV    D  GN+++E+L   A    +NLS +M+TYPSTHGVYE ++ EIC++  ++GGQVY+DGANMNA   LT+PG
Sbjct:  441 LGEGHGLDVAALDAEIIKAGSSSIPAQLVRTDAILTHPTFNSYHSETEMMRYIKRLENKDLALNHSMISLGSCTMKLNAATEMMPISWPEFGNMHPFCPLDQSEGYTDLIEELSTWLVDITGYDAMCMQANSGASGEYAGLLAIRNYHISRGDAHRNVCLIPQSAHGTNPASAQMAGMKIVVTACDKAGNVDMEDLKAKAAEVAENLSCIMITYPSTHGVYEETVSEICEVIHQHGGQVYLDGANMNAQVGLTTPG 696          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_SHEB8 (Glycine dehydrogenase [decarboxylating] OS=Shewanella baltica (strain OS185) GN=gcvP PE=3 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.273e-82
Identity = 142/256 (55.47%), Postives = 189/256 (73.83%), Query Frame = 1
Query:   10 LGANH---FHSLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            LGA+H     +L A +  +   +IP+ L R+   L+HP FN+Y +E E++RYI  L+SK+L+L +SMI LGSCTMKLNA  EM+PV+WP FAN+HPF+P DQA+GY ++   L  WL  ITG+D+  +QPN+GA GEYAGL+ I+ YH++RGD HRN+C+IP SAHGTNPA+A + GM++V    D +GN+++E+L   A     NLS +M+TYPSTHGVYE SI EIC I  ++GGQVY+DGANMNA   LTSPG
Sbjct:  441 LGADHGLDVAALDAQIVSQGSQSIPAALVRQDAILSHPTFNRYQSETEMMRYIKRLESKDLALNYSMISLGSCTMKLNAAVEMLPVSWPEFANMHPFSPLDQAKGYTQLIEELSTWLVNITGYDAVCIQPNSGAQGEYAGLLAIKKYHESRGDAHRNICLIPQSAHGTNPASAQLAGMQVVVTACDKQGNVDLEDLKTKAAEVAGNLSCIMITYPSTHGVYEESIREICDIVHQHGGQVYLDGANMNAQVGLTSPG 696          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_BURM1 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=gcvP PE=3 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.273e-82
Identity = 142/236 (60.17%), Postives = 184/236 (77.97%), Query Frame = 1
Query:   61 ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            E A+P+ L R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLGSCTMKLNAT+EM+PVTWP F  IHPFAPA+Q  GY+EM + L + L   TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HR+VC+IP SAHGTNPA+A M GMK+V V  DA+GN++I +L   AE +  NL+ +M+TYPSTHGV+E+++ EIC+I   +GGQVY+DGANMNA   LT+PG
Sbjct:  475 EAALPASLVRTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGRIHPFAPAEQTVGYREMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGEGHRDVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIADLKAKAEQHSANLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTAPG 710          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_BURCC (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cenocepacia (strain MC0-3) GN=gcvP PE=3 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.273e-82
Identity = 142/234 (60.68%), Postives = 184/234 (78.63%), Query Frame = 1
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            A+P+GL R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLGSCTMKLNAT+EM+PVTWP F  IHPFAPA+Q  GY+EM + L + L   TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HR+VC+IP SAHGTNPA+A M GMK+V V  DA+GN++I +L   AE +  NL+ +M+TYPSTHGV+E+++ EIC+I   +GGQVY+DGANMNA   LT+PG
Sbjct:  477 ALPAGLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGGIHPFAPAEQTVGYREMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGEGHRDVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIADLKAKAEQHSANLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTAPG 710          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_SHESW (Glycine dehydrogenase [decarboxylating] OS=Shewanella sp. (strain W3-18-1) GN=gcvP PE=3 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.663e-82
Identity = 143/256 (55.86%), Postives = 189/256 (73.83%), Query Frame = 1
Query:   10 LGANHFHSLAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            LGA H   +AA  A+ V     +IP+ L R+   L+HP FN+Y +E E++RYI  L+SK+L+L +SMI LGSCTMKLNA  EM+PV+WP FAN+HPF P DQA+GY ++   L  WL  +TG+D+  +QPN+GA GEYAGL+ I+ YH++RGD HRN+C+IP SAHGTNPA+A + GM++V    D +GN+++E+L   A    +NLS +M+TYPSTHGVYE SI EIC I  ++GGQVY+DGANMNA   LTSPG
Sbjct:  441 LGAGHGLDVAALDAQIVAQGSQSIPAALVRQDAILSHPTFNRYQSETEMMRYIKRLESKDLALNYSMISLGSCTMKLNAAVEMIPVSWPEFANMHPFCPLDQAKGYTQLIEELSSWLVNVTGYDAVCIQPNSGAQGEYAGLLAIKKYHESRGDAHRNICLIPQSAHGTNPASAQLAGMQVVVTACDKQGNVDLEDLKTKAAEVAENLSCIMITYPSTHGVYEESIREICDIVHQHGGQVYLDGANMNAQVGLTSPG 696          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_SHESM (Glycine dehydrogenase [decarboxylating] OS=Shewanella sp. (strain MR-4) GN=gcvP PE=3 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.663e-82
Identity = 144/256 (56.25%), Postives = 187/256 (73.05%), Query Frame = 1
Query:   10 LGANHFHSLAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            LGA H   +AA  A+ V     +IP  L R+   LTHP FN+Y +E E++RYI  L+SK+L+L +SMI LGSCTMKLNA  EM+PV+WP FAN+HPF P DQA+GY ++   L  WL  +TG+D+  +QPN+GA GEYAGL+ IR YH++RG  HRN+C+IP SAHGTNPA+A + GM++V    D +GN+++E+L   A    +NLS +M+TYPSTHGVYE SI EIC I  ++GGQVY+DGANMNA   LTSPG
Sbjct:  441 LGAGHGLDVAALDAQIVAQGSQSIPEALVRQDAILTHPTFNRYQSETEMMRYIKRLESKDLALNYSMISLGSCTMKLNAAVEMLPVSWPEFANMHPFCPLDQAKGYTQLIEELSSWLVNVTGYDAVCIQPNSGAQGEYAGLLAIRKYHESRGQAHRNICLIPQSAHGTNPASAQLAGMQVVVTACDKQGNVDLEDLKAKAAEVAENLSCIMITYPSTHGVYEESIREICNIVHQHGGQVYLDGANMNAQVGLTSPG 696          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_SHEPC (Glycine dehydrogenase [decarboxylating] OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=gcvP PE=3 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.663e-82
Identity = 143/256 (55.86%), Postives = 189/256 (73.83%), Query Frame = 1
Query:   10 LGANHFHSLAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            LGA H   +AA  A+ V     +IP+ L R+   L+HP FN+Y +E E++RYI  L+SK+L+L +SMI LGSCTMKLNA  EM+PV+WP FAN+HPF P DQA+GY ++   L  WL  +TG+D+  +QPN+GA GEYAGL+ I+ YH++RGD HRN+C+IP SAHGTNPA+A + GM++V    D +GN+++E+L   A    +NLS +M+TYPSTHGVYE SI EIC I  ++GGQVY+DGANMNA   LTSPG
Sbjct:  441 LGAGHGLDVAALDAQIVAQGSQSIPAALVRQDAILSHPTFNRYQSETEMMRYIKRLESKDLALNYSMISLGSCTMKLNAAVEMIPVSWPEFANMHPFCPLDQAKGYTQLIEELSSWLVNVTGYDAVCIQPNSGAQGEYAGLLAIKKYHESRGDAHRNICLIPQSAHGTNPASAQLAGMQVVVTACDKQGNVDLEDLKTKAAEVAENLSCIMITYPSTHGVYEESIREICDIVHQHGGQVYLDGANMNAQVGLTSPG 696          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_ERWCT (Glycine dehydrogenase [decarboxylating] OS=Erwinia carotovora subsp. atroseptica GN=gcvP PE=3 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.663e-82
Identity = 143/256 (55.86%), Postives = 192/256 (75.00%), Query Frame = 1
Query:   10 LGANH---FHSLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            LG +H     +L AS+A+EV T IP+GL R    L+HPVFN+YH+E E++RY+H L  K+L+L  +MIPLGSCTMKLNA  EM+P+TWP FA +HPF P +QA GY++M   L  WL  +TG+D+  +QPN+GA GEYAGL+ IR YH++R +  R++C+IP SAHGTNPA+A M GM++V V  D +GNI++ +L   A+A  + LS +MVTYPSTHGVYE +I E+C+I  +YGGQVY+DGANMNA   +T+PG
Sbjct:  441 LGDDHGLDIEALDASIAQEVAT-IPAGLLRHDAILSHPVFNRYHSETEMMRYLHRLARKDLALNQAMIPLGSCTMKLNAAAEMLPITWPEFAELHPFCPPEQALGYRQMIEQLSGWLVQLTGYDAVCMQPNSGAQGEYAGLLAIRRYHESRNEAGRHLCLIPSSAHGTNPASAQMAGMEVVVVACDKQGNIDLHDLREKAQAAGEQLSCIMVTYPSTHGVYEETIREVCQIVHQYGGQVYLDGANMNAQVGITTPG 695          
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_BURCM (Glycine dehydrogenase [decarboxylating] OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=gcvP PE=3 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 2.172e-82
Identity = 141/234 (60.26%), Postives = 185/234 (79.06%), Query Frame = 1
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            A+P+GL R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLGSCTMKLNAT+EM+PVTWP F  IHPFAPA+Q  GY+EM + L + L   TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HR+VC+IP SAHGTNPA+A M GMK+V V  DA+GN++I +L   AE + ++L+ +M+TYPSTHGV+E+++ EIC+I   +GGQVY+DGANMNA   LT+PG
Sbjct:  477 ALPAGLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGRIHPFAPAEQTVGYREMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGEAHRDVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIADLKAKAEQHANDLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTAPG 710          
The following BLAST results are available for this feature:
BLAST of EY665021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSP_RALPJ7.463e-8358.65Glycine dehydrogenase [decarboxylating] OS=Ralston... [more]
GCSP_SHESH9.747e-8356.25Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_SHEB81.273e-8255.47Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_BURM11.273e-8260.17Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_BURCC1.273e-8260.68Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_SHESW1.663e-8255.86Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_SHESM1.663e-8256.25Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_SHEPC1.663e-8255.86Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_ERWCT1.663e-8255.86Glycine dehydrogenase [decarboxylating] OS=Erwinia... [more]
GCSP_BURCM2.172e-8260.26Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665021 ID=EY665021; Name=EY665021; organism=Citrus sinensis; type=EST; length=770bp
TAGTTTTTTCTGGGGGCAAATCATTTCCATTCACTCGCTGCATCTCTGGC
TGAAGAGGTTGAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGT
ATCTGACACATCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTT
AGATACATTCATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTAT
GATTCCATTGGGATCTTGTACAATGAAATTGAATGCAACAACTGAAATGA
TGCCAGTGACATGGCCTAGCTTTGCTAACATACACCCTTTTGCCCCTGCT
GACCAGGCTCAGGGTTATCAGGAAATGTTTAACAATCTGGGTGAGTGGCT
GTGTACCATTACTGGCTTTGACTCTTTCTCTTTGCAACCAAATGCTGGTG
CAGCTGGTGAGTATGCTGGGCTCATGGTTATCCGCGCTTATCATAAGGCA
AGAGGAGACCATCACCGCAATGTGTGCATTATACCCGTGTCAGCCCATGG
GACAAATCCTGCTACTGCTGCCATGTGTGGAATGAAGATTGTTTCTGTTG
GAACTGATGCCAAGGGTAACATCAACATTGAAGAGTTAATGAATGCCGCA
GAAGCTAATATGGACAACCTATCAACCCTTATGGTAACGTACCCTTCAAC
TCATGGAGTTTATGAAAGAAGTATTGATGAGATATGCAAGATAAATTCAC
GATATGGAGGTCAAGTATATATGGACGGGGCTAACATGAATGCTCANGGT
CGTCTGACAAGCCCTGGTTA
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