EY665021

Overview
NameEY665021
Unique NameEY665021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_ECO7I (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=gcvP PE=3 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 6.318e-82
Identity = 141/256 (55.08%), Postives = 190/256 (74.22%), Query Frame = 1 
Query:   10 LGANH---FHSLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            LG NH     +L   +A +  +  P+ L R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA  EM+P+TWP FA +HPF P +QA+GYQ+M   L +WL  +TG+D+  +QPN+GA GEYAGL+ IR YH++R + HR++C+IP SAHGTNPA+A M GM++V V  D  GNI++ +L   AE   DNLS +MVTYPSTHGVYE +I E+C++  ++GGQVY+DGANMNA   +TSPG
Sbjct:  441 LGDNHGLDIDTLDKDVAHDSRSIQPAML-RDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQMIAQLADWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVACDKNGNIDLADLRAKAEQAGDNLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDGANMNAQVGITSPG 695
[Close]
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_ECO5E (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=gcvP PE=3 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 6.318e-82
Identity = 141/256 (55.08%), Postives = 190/256 (74.22%), Query Frame = 1 
Query:   10 LGANH---FHSLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            LG NH     +L   +A +  +  P+ L R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA  EM+P+TWP FA +HPF P +QA+GYQ+M   L +WL  +TG+D+  +QPN+GA GEYAGL+ IR YH++R + HR++C+IP SAHGTNPA+A M GM++V V  D  GNI++ +L   AE   DNLS +MVTYPSTHGVYE +I E+C++  ++GGQVY+DGANMNA   +TSPG
Sbjct:  441 LGDNHGLDIDTLDKDVAHDSRSIQPAML-RDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQMIAQLADWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVACDKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDGANMNAQVGITSPG 695
[Close]
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_ECO57 (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O157:H7 GN=gcvP PE=3 SV=3)

HSP 1 Score: 303.908 bits (777), Expect = 6.318e-82
Identity = 141/256 (55.08%), Postives = 190/256 (74.22%), Query Frame = 1 
Query:   10 LGANH---FHSLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            LG NH     +L   +A +  +  P+ L R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA  EM+P+TWP FA +HPF P +QA+GYQ+M   L +WL  +TG+D+  +QPN+GA GEYAGL+ IR YH++R + HR++C+IP SAHGTNPA+A M GM++V V  D  GNI++ +L   AE   DNLS +MVTYPSTHGVYE +I E+C++  ++GGQVY+DGANMNA   +TSPG
Sbjct:  441 LGDNHGLDIDTLDKDVAHDSRSIQPAML-RDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQMIAQLADWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVACDKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDGANMNAQVGITSPG 695
[Close]
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_ECO55 (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli (strain 55989 / EAEC) GN=gcvP PE=3 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 6.318e-82
Identity = 141/256 (55.08%), Postives = 190/256 (74.22%), Query Frame = 1 
Query:   10 LGANH---FHSLAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            LG NH     +L   +A +  +  P+ L R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA  EM+P+TWP FA +HPF P +QA+GYQ+M   L +WL  +TG+D+  +QPN+GA GEYAGL+ IR YH++R + HR++C+IP SAHGTNPA+A M GM++V V  D  GNI++ +L   AE   DNLS +MVTYPSTHGVYE +I E+C++  ++GGQVY+DGANMNA   +TSPG
Sbjct:  441 LGDNHGLDIDTLDKDVAHDSRSIQPAML-RDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQMIAQLADWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVACDKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDGANMNAQVGITSPG 695
[Close]
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_AZOSE (Glycine dehydrogenase [decarboxylating] OS=Azoarcus sp. (strain EbN1) GN=gcvP PE=3 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 6.318e-82
Identity = 141/233 (60.52%), Postives = 178/233 (76.39%), Query Frame = 1 
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSP 765
            AIP+ L R+   LTHPVFN +HTEHE+LRY+  LQ+++L+L HSMI LGSCTMKLNAT+EM+P+TW  FAN+HPFAP +Q +GY EM + L  +L  +TGF + S+QPN+GA GEYAGL+ IR YH +RGD HR VC+IP SAHGTNPA+A MCGM +V V  D +GN+++ +L      + D L+ LM+TYPSTHGV+E SI EIC    R+GGQVYMDGAN+NA   LTSP
Sbjct:  467 AIPAALLRDDAILTHPVFNTHHTEHEMLRYLKKLQNRDLALDHSMISLGSCTMKLNATSEMIPITWAEFANLHPFAPREQVRGYLEMIDGLAGYLKAVTGFAAISMQPNSGAQGEYAGLVAIRRYHDSRGDTHRRVCLIPKSAHGTNPASAQMCGMDVVVVACDERGNVDLADLEAKVAQHADRLAALMITYPSTHGVFEESIREICASVHRHGGQVYMDGANLNAQVGLTSP 699
[Close]
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_BURS3 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia sp. (strain 383) GN=gcvP PE=3 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 8.252e-82
Identity = 140/234 (59.83%), Postives = 184/234 (78.63%), Query Frame = 1 
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            A+P+GL R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLGSCTMKLNAT+EM+PVTWP F  IHPFAPA+Q  GY+EM + L + L   TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HR+VC+IP SAHGTNPA+A M GMK+V V  DA+GN++I +L   A+ +  +L+ +M+TYPSTHGV+E+++ EIC+I   +GGQVY+DGANMNA   LT+PG
Sbjct:  477 ALPAGLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGGIHPFAPAEQTVGYREMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGEAHRDVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIADLKAKADEHAKDLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTAPG 710
[Close]
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_BURPS (Glycine dehydrogenase [decarboxylating] OS=Burkholderia pseudomallei GN=gcvP PE=3 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 8.252e-82
Identity = 140/234 (59.83%), Postives = 184/234 (78.63%), Query Frame = 1 
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            A+P  L R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLGSCTMKLNAT+EM+PVTWP F  IHPFAPA+Q  GY+EM + L + L   TG+ + SLQPNAG+ GEYAGL++I AYH++RG+ HR+VC+IP SAHGTNPA+A M GMK+V V  DA+GN++I +L   A+A+  +L+ +M+TYPSTHGV+E+++ EIC+I   +GGQVY+DGANMNA   LT+PG
Sbjct:  477 ALPPSLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGRIHPFAPAEQTVGYREMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHESRGESHRDVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIADLKAKADAHSHDLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTAPG 710
[Close]
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_BURP6 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia pseudomallei (strain 668) GN=gcvP PE=3 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 8.252e-82
Identity = 140/234 (59.83%), Postives = 184/234 (78.63%), Query Frame = 1 
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            A+P  L R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLGSCTMKLNAT+EM+PVTWP F  IHPFAPA+Q  GY+EM + L + L   TG+ + SLQPNAG+ GEYAGL++I AYH++RG+ HR+VC+IP SAHGTNPA+A M GMK+V V  DA+GN++I +L   A+A+  +L+ +M+TYPSTHGV+E+++ EIC+I   +GGQVY+DGANMNA   LT+PG
Sbjct:  477 ALPPSLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGRIHPFAPAEQTVGYREMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHESRGESHRDVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIADLKAKADAHSHDLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTAPG 710
[Close]
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_BURP1 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia pseudomallei (strain 1710b) GN=gcvP PE=3 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 8.252e-82
Identity = 140/234 (59.83%), Postives = 184/234 (78.63%), Query Frame = 1 
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            A+P  L R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLGSCTMKLNAT+EM+PVTWP F  IHPFAPA+Q  GY+EM + L + L   TG+ + SLQPNAG+ GEYAGL++I AYH++RG+ HR+VC+IP SAHGTNPA+A M GMK+V V  DA+GN++I +L   A+A+  +L+ +M+TYPSTHGV+E+++ EIC+I   +GGQVY+DGANMNA   LT+PG
Sbjct:  477 ALPPSLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGRIHPFAPAEQTVGYREMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHESRGESHRDVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIADLKAKADAHSHDLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTAPG 710
[Close]
BLAST of EY665021 vs. ExPASy Swiss-Prot
Match: GCSP_BURP0 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia pseudomallei (strain 1106a) GN=gcvP PE=3 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 8.252e-82
Identity = 140/234 (59.83%), Postives = 184/234 (78.63%), Query Frame = 1 
Query:   67 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELMNAAEANMDNLSTLMVTYPSTHGVYERSIDEICKINSRYGGQVYMDGANMNAXGRLTSPG 768
            A+P  L R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLGSCTMKLNAT+EM+PVTWP F  IHPFAPA+Q  GY+EM + L + L   TG+ + SLQPNAG+ GEYAGL++I AYH++RG+ HR+VC+IP SAHGTNPA+A M GMK+V V  DA+GN++I +L   A+A+  +L+ +M+TYPSTHGV+E+++ EIC+I   +GGQVY+DGANMNA   LT+PG
Sbjct:  477 ALPPSLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGRIHPFAPAEQTVGYREMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHESRGESHRDVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIADLKAKADAHSHDLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTAPG 710
The following BLAST results are available for this feature:
BLAST of EY665021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSP_ECO7I6.318e-8255.08Glycine dehydrogenase [decarboxylating] OS=Escheri... [more]
GCSP_ECO5E6.318e-8255.08Glycine dehydrogenase [decarboxylating] OS=Escheri... [more]
GCSP_ECO576.318e-8255.08Glycine dehydrogenase [decarboxylating] OS=Escheri... [more]
GCSP_ECO556.318e-8255.08Glycine dehydrogenase [decarboxylating] OS=Escheri... [more]
GCSP_AZOSE6.318e-8260.52Glycine dehydrogenase [decarboxylating] OS=Azoarcu... [more]
GCSP_BURS38.252e-8259.83Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_BURPS8.252e-8259.83Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_BURP68.252e-8259.83Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_BURP18.252e-8259.83Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_BURP08.252e-8259.83Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665021 ID=EY665021; Name=EY665021; organism=Citrus sinensis; type=EST; length=770bp
TAGTTTTTTCTGGGGGCAAATCATTTCCATTCACTCGCTGCATCTCTGGC
TGAAGAGGTTGAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGT
ATCTGACACATCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTT
AGATACATTCATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTAT
GATTCCATTGGGATCTTGTACAATGAAATTGAATGCAACAACTGAAATGA
TGCCAGTGACATGGCCTAGCTTTGCTAACATACACCCTTTTGCCCCTGCT
GACCAGGCTCAGGGTTATCAGGAAATGTTTAACAATCTGGGTGAGTGGCT
GTGTACCATTACTGGCTTTGACTCTTTCTCTTTGCAACCAAATGCTGGTG
CAGCTGGTGAGTATGCTGGGCTCATGGTTATCCGCGCTTATCATAAGGCA
AGAGGAGACCATCACCGCAATGTGTGCATTATACCCGTGTCAGCCCATGG
GACAAATCCTGCTACTGCTGCCATGTGTGGAATGAAGATTGTTTCTGTTG
GAACTGATGCCAAGGGTAACATCAACATTGAAGAGTTAATGAATGCCGCA
GAAGCTAATATGGACAACCTATCAACCCTTATGGTAACGTACCCTTCAAC
TCATGGAGTTTATGAAAGAAGTATTGATGAGATATGCAAGATAAATTCAC
GATATGGAGGTCAAGTATATATGGACGGGGCTAACATGAATGCTCANGGT
CGTCTGACAAGCCCTGGTTA
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