FC871830

Overview
NameFC871830
Unique NameFC871830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC871830 vs. ExPASy Swiss-Prot
Match: TPIS_XENTR (Triosephosphate isomerase OS=Xenopus tropicalis GN=tpi1 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.551e-40
Identity = 79/104 (75.96%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:    2 VAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 313
            V EQTKAIA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR+WLK NVS +VA S RIIYGGSV G  CKEL AQPD+DGFLVGGASLKPEFIDII +
Sbjct:  143 VFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPEQAQEVHKKLREWLKTNVSEDVAKSVRIIYGGSVTGGTCKELGAQPDIDGFLVGGASLKPEFIDIINA 246
[Close]
BLAST of FC871830 vs. ExPASy Swiss-Prot
Match: TPIS_RABIT (Triosephosphate isomerase OS=Oryctolagus cuniculus GN=TPI1 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.551e-40
Identity = 80/104 (76.92%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:    2 VAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 313
            V EQTK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS  VA STRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  143 VFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 246
[Close]
BLAST of FC871830 vs. ExPASy Swiss-Prot
Match: TPIS_PONAB (Triosephosphate isomerase OS=Pongo abelii GN=TPI1 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.551e-40
Identity = 80/104 (76.92%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:    2 VAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 313
            V EQTK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS  VA STRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  144 VFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
[Close]
BLAST of FC871830 vs. ExPASy Swiss-Prot
Match: TPIS_PANTR (Triosephosphate isomerase OS=Pan troglodytes GN=TPI1 PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 1.551e-40
Identity = 80/104 (76.92%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:    2 VAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 313
            V EQTK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS  VA STRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  144 VFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
[Close]
BLAST of FC871830 vs. ExPASy Swiss-Prot
Match: TPIS_HUMAN (Triosephosphate isomerase OS=Homo sapiens GN=TPI1 PE=1 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 1.551e-40
Identity = 80/104 (76.92%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:    2 VAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 313
            V EQTK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS  VA STRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  144 VFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
[Close]
BLAST of FC871830 vs. ExPASy Swiss-Prot
Match: TPIS_CANFA (Triosephosphate isomerase OS=Canis familiaris GN=TPI1 PE=1 SV=3)

HSP 1 Score: 165.622 bits (418), Expect = 1.551e-40
Identity = 80/104 (76.92%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:    2 VAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 313
            V EQTK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS  VA STRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  144 VFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
[Close]
BLAST of FC871830 vs. ExPASy Swiss-Prot
Match: TPIS_MOUSE (Triosephosphate isomerase OS=Mus musculus GN=Tpi1 PE=1 SV=3)

HSP 1 Score: 164.081 bits (414), Expect = 4.513e-40
Identity = 79/104 (75.96%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:    2 VAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 313
            V EQTK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NV+  VA STRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  144 VFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVNDGVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
[Close]
BLAST of FC871830 vs. ExPASy Swiss-Prot
Match: TPIS_GORGO (Triosephosphate isomerase OS=Gorilla gorilla gorilla GN=TPI1 PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.513e-40
Identity = 79/104 (75.96%), Postives = 86/104 (82.69%), Query Frame = 2 
Query:    2 VAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 313
            V EQTK I + + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS  VA STRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  144 VFEQTKVITDNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
[Close]
BLAST of FC871830 vs. ExPASy Swiss-Prot
Match: TPIS_BOVIN (Triosephosphate isomerase OS=Bos taurus GN=TPI1 PE=2 SV=3)

HSP 1 Score: 163.696 bits (413), Expect = 5.894e-40
Identity = 79/104 (75.96%), Postives = 86/104 (82.69%), Query Frame = 2 
Query:    2 VAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 313
            V EQTK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS  VA S RIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  144 VFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSARIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
[Close]
BLAST of FC871830 vs. ExPASy Swiss-Prot
Match: TPIS_RAT (Triosephosphate isomerase OS=Rattus norvegicus GN=Tpi1 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.005e-39
Identity = 80/104 (76.92%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:    2 VAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 313
            V EQTKAIA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS  VA  TRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  144 VFEQTKAIADNVKDWCKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKCNVSEGVAQCTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
The following BLAST results are available for this feature:
BLAST of FC871830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_XENTR1.551e-4075.96Triosephosphate isomerase OS=Xenopus tropicalis GN... [more]
TPIS_RABIT1.551e-4076.92Triosephosphate isomerase OS=Oryctolagus cuniculus... [more]
TPIS_PONAB1.551e-4076.92Triosephosphate isomerase OS=Pongo abelii GN=TPI1 ... [more]
TPIS_PANTR1.551e-4076.92Triosephosphate isomerase OS=Pan troglodytes GN=TP... [more]
TPIS_HUMAN1.551e-4076.92Triosephosphate isomerase OS=Homo sapiens GN=TPI1 ... [more]
TPIS_CANFA1.551e-4076.92Triosephosphate isomerase OS=Canis familiaris GN=T... [more]
TPIS_MOUSE4.513e-4075.96Triosephosphate isomerase OS=Mus musculus GN=Tpi1 ... [more]
TPIS_GORGO4.513e-4075.96Triosephosphate isomerase OS=Gorilla gorilla goril... [more]
TPIS_BOVIN5.894e-4075.96Triosephosphate isomerase OS=Bos taurus GN=TPI1 PE... [more]
TPIS_RAT1.005e-3976.92Triosephosphate isomerase OS=Rattus norvegicus GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK1DC12FM2 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK1DC12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871830 ID=FC871830; Name=FC871830; organism=Citrus sinensis; type=EST; length=577bp
TGTGGCTGAACAAACAAAAGCAATCGCAGAAAAAATATCCAACTGGGACA
ATGTTGTGTTGGCTTATGAGCCAGTTTGGGCCATTGGTACCGGGAAGGTT
GCAACCCCTGCTCAGGCTCAGGAAGTCCATGCTGAACTGAGGAAATGGCT
TAAAGACAATGTCAGTGCTGAAGTTGCAGCATCAACTAGAATCATCTACG
GAGGTTCTGTAAATGGAGCAAATTGCAAAGAATTGGCAGCACAACCTGAT
GTGGATGGATTTTTGGTTGGTGGAGCTTCTCTAAAGCCGGAGTTCATCGA
TATTATCAAGTCTGCCACAGTGAAGAAGAATTGAAGTTAAAGACCAAGCT
ACTCGGCTTGCTGATGCCTGCAGTTTTCTCTGTTATGCGTTCTGGAAACT
AGCGTTGTAATTTTTGTGGTCTGTTAAGTGTTACCAACGCCTTTCCAGTA
TAATAAGTTAAATCTTCAGAATTCTTAAGAATCTCTTTCCTATTTCAGTG
GGGATTTGAAACTTATCATTGTGGATTTAATAAATGGTTGCTTTTCCCTT
CTTGCAAAAAAAAAAAAAAAAAAAAAA
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