FC871828

Overview
NameFC871828
Unique NameFC871828
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871828 vs. ExPASy Swiss-Prot
Match: PEPA_CALJA (Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.564e-11
Identity = 41/132 (31.06%), Postives = 62/132 (46.97%), Query Frame = 1
Query:  169 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 564
            G++  C+    A+V     L    T    ++ I     +  N  GE ++ C  I ++P++ FTI    + +    YIL+   G    C SGF   ++P   G LWILGDVF+  Y  VFD    ++G A  A
Sbjct:  262 GEAIACAEGCQAIVDTGTSLLSGPTSP--IANIQSYIGASENSNGEMVVSCSAISSLPDIVFTINGIQYPVPASAYILQDEGG----CTSGFQGMNIPTAYGELWILGDVFIRQYFAVFDRANNQVGLAPVA 387          
BLAST of FC871828 vs. ExPASy Swiss-Prot
Match: PEPA4_RABIT (Pepsin II-4 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.564e-11
Identity = 43/131 (32.82%), Postives = 63/131 (48.09%), Query Frame = 1
Query:  169 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 561
            G++  C+    A+V     L    T    +S I     +  N +GE++I C  I ++P++ FTI    + L    YILK  +     C SG    ++    G LWILGDVF+  Y TVFD    ++G A A
Sbjct:  262 GETIACADSCQAIVDTGTSLLTGPTS--AISNIQSYIGASKNLLGENVISCSAIDSLPDIVFTINGIQYPLPASAYILKEDDD----CTSGLEGMNVDTYTGELWILGDVFIRQYFTVFDRANNQLGLAAA 386          
BLAST of FC871828 vs. ExPASy Swiss-Prot
Match: PEPA2_RABIT (Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.564e-11
Identity = 43/131 (32.82%), Postives = 63/131 (48.09%), Query Frame = 1
Query:  169 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 561
            G++  C+    A+V     L    T    +S I     +  N +GE++I C  I ++P++ FTI    + L    YILK  +     C SG    ++    G LWILGDVF+  Y TVFD    ++G A A
Sbjct:  262 GETIACADSCQAIVDTGTSLLTGPTS--AISNIQSYIGASKNLLGENVISCSAIDSLPDIVFTINGIQYPLPASAYILKEDDD----CTSGLEGMNVDTYTGELWILGDVFIRQYFTVFDRANNQLGLAAA 386          
BLAST of FC871828 vs. ExPASy Swiss-Prot
Match: PEPC_SUNMU (Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.349e-11
Identity = 37/107 (34.58%), Postives = 58/107 (54.21%), Query Frame = 1
Query:  247 EKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRG-PLWILGDVFMGVYHTVFDSGKLRIGFAEAA 564
            ++ +S + +   +  +  G+  ++C+ I ++P ++F I    F L P  Y+L T       C  G     LP   G PLWILGDVF+  Y++V+D G  R+GFA AA
Sbjct:  287 QQFMSALQQATGAQQDQYGQLAVNCNSIQSLPTLTFIINGVQFPLPPSAYVLNTNG----YCFLGVEPTYLPSQNGQPLWILGDVFLRSYYSVYDMGNNRVGFATAA 389          
BLAST of FC871828 vs. ExPASy Swiss-Prot
Match: PEPC_MOUSE (Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 38/102 (37.25%), Postives = 56/102 (54.90%), Query Frame = 1
Query:  262 YINELCDSL---PNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRG-PLWILGDVFMGVYHTVFDSGKLRIGFA 555
            Y+NEL  ++       G+  + CD + ++P ++F +    F LSP  YI++  EG    C+ G  +  L    G PLWILGDVF+  Y+ VFD G  R+G A
Sbjct:  292 YLNELLQTIGAQEGEYGQYFVSCDSVSSLPTLTFVLNGVQFPLSPSSYIIQE-EGS---CMVGLESLSLNAESGQPLWILGDVFLRSYYAVFDMGNNRVGLA 389          
BLAST of FC871828 vs. ExPASy Swiss-Prot
Match: PEPC_MONDO (Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 55/184 (29.89%), Postives = 82/184 (44.57%), Query Frame = 1
Query:   22 QYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAV--CSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRG-PLWILGDVFMGVYHTVFDSGKLRIGFAEAA 564
            QYG    +L++ G+ P+    QI         Y   GI      E  + G+ A   CS    A+V     L      ++ +S   +   +     G+ +++C+ I  MP ++F I    F L P  Y+          C  G  A  LP P G PLWILGDVF+  Y++V+D    R+GFA +A
Sbjct:  223 QYGG---ELILGGVDPQLYSGQITWTPVTQEVYWQIGI------EEFAIGNQATGWCSQGCQAIVDTGTFLLA--VPQQYMSAFLQATGAQQAQNGDFMVNCNYIQDMPTITFVINGSQFPLPPSAYVFNNNG----YCRLGIEATYLPSPNGQPLWILGDVFLKEYYSVYDMANNRVGFAYSA 391          
BLAST of FC871828 vs. ExPASy Swiss-Prot
Match: PEPB_CANFA (Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 35/86 (40.70%), Postives = 46/86 (53.49%), Query Frame = 1
Query:  301 GESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRG-PLWILGDVFMGVYHTVFDSGKLRIGFA 555
            G  +++C+ I +MP ++F I      L P  Y+L         C  G     LP P G PLWILGDVF+  Y+TVFD    R+GFA
Sbjct:  306 GNFVVNCNSIQSMPTITFVISGSPLPLPPSTYVLNNNG----YCTLGIEVTYLPSPNGQPLWILGDVFLREYYTVFDMAANRVGFA 387          
The following BLAST results are available for this feature:
BLAST of FC871828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
PEPA_CALJA2.564e-1131.06Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1[more]
PEPA4_RABIT2.564e-1132.82Pepsin II-4 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPA2_RABIT2.564e-1132.82Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPC_SUNMU3.349e-1134.58Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2[more]
PEPC_MOUSE7.460e-1137.25Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1[more]
PEPC_MONDO7.460e-1129.89Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV... [more]
PEPB_CANFA7.460e-1140.70Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAK1DC10FM2 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK1DC10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871828 ID=FC871828; Name=FC871828; organism=Citrus sinensis; type=EST; length=761bp
GAGTGTAAGCTAGTTGTTTCCCAGTACGGGGATTTAATATGGGATCTTTT
AGTATCAGGGCTACTACCTGAGAAAGTATGTCAGCAGATTGGTTTATGTG
CTTTCAATGGCGCTGAATATGTGAGTACTGGGATCAAGACCGTGGTTGAG
AAGGAAAACGTATCAGCCGGGGATAGTGCAGTGTGCAGTGCTTGTGAAAT
GGCCGTGGTTTGGGTCCAGAATCAGCTAAAACAAAAGCAAACAAAGGAGA
AAGTACTCAGTTATATAAATGAGCTCTGCGACAGCCTGCCAAATCCGATG
GGCGAATCAATTATTGACTGTGATCGCATTCCAACCATGCCAAATGTTTC
ATTCACCATCGGAGACAAAATTTTCAACCTCTCTCCAGAGCAGTATATTC
TGAAAACCGGAGAAGGGATTGCAGAAGTCTGCATCAGTGGCTTCATGGCT
TTCGACCTGCCTCCTCCAAGGGGTCCTCTGTGGATTCTGGGAGATGTATT
CATGGGGGTTTATCACACTGTTTTCGACTCTGGTAAGCTCCGGATCGGCT
TTGCTGAGGCTGCGTAATGATCTACTTACTGTCAAGTTTTTATGTAGTAG
CAGCGATCATCACCTGCTCATATGAGGAGGAGGGTTCTAGAATGTAGATT
ATGGTTTTCATGTACTGTAAAACGATCAGTATGCTTTTATGCATAACTAT
CTTCATCATCACCACAGATGATATGCTGATATATACTTATGTAAAATCCT
ATCATCCTATG
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