EY664966

Overview
NameEY664966
Unique NameEY664966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664966 vs. ExPASy Swiss-Prot
Match: TM9S3_HUMAN (Transmembrane 9 superfamily member 3 OS=Homo sapiens GN=TM9SF3 PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 2.305e-31
Identity = 80/273 (29.30%), Postives = 133/273 (48.72%), Query Frame = 3
Query:   96 RGMLLTGMIFLFLFLGIAAGYVAVRMWRTIKGTSEGWRSVAWSAACFFPGIVFVILTVLNFVLWGSKSTGALPISLYFVLLSLWFCISVPLTLLGGFFGTRAE-EITYPVRTNQIPREIPARKY---PSWLLVLGAGTLPFGTLFIELFFILSSIWLGRFYYVFGFXXXXXXXXXXXXXXXXXXXTYMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLGTRTIGFLTSFYFVHYLFSSVKID 902
            RG +L+  IF++       GY    ++    G    W    +  A   P +V      +NF+     ++ A+P      +  + F + +PL L+G   G     +  +P R N +PR IP +K+   P+ ++ LG G LPFG++FIE++FI +S W  + YYV+GF                   TY  L  ED+RW W +F ++ S A+YV++YS  Y  F  + + G      Y GY  + + A+ +    IG++ +  FV  ++++VKID
Sbjct:  321 RGSMLSTAIFVYAATSPVNGYFGGSLYARQGGRR--WIKQMFIGAFLIPAMVCGTAFFINFIAIYYHASRAIPFGTMVAVCCICFFVILPLNLVGTILGRNLSGQPNFPCRVNAVPRPIPEKKWFMEPAVIVCLG-GILPFGSIFIEMYFIFTSFWAYKIYYVYGFMMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYYFFKTK-MYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 589          
BLAST of EY664966 vs. ExPASy Swiss-Prot
Match: PHG1C_DICDI (Putative phagocytic receptor 1c OS=Dictyostelium discoideum GN=phg1c PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.818e-29
Identity = 77/286 (26.92%), Postives = 133/286 (46.50%), Query Frame = 3
Query:   51 VTIIFAALGFMSPASRGMLLTGMIFLFLFLGIAAGYVAVRMWRTIKGTSEGWRSVAWSAACFFPGIVFVILTVLNFVLWGSKSTGALPISLYFVLLSLWFCISVPLTLLGGFFGTRAEEITYPVRTNQIPREIPARKY--PSWLLVLGAGTLPFGTLFIELFFILSSIWLGRFYYVFGFXXXXXXXXXXXXXXXXXXXTYMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLGTRTIGFLTSFYFVHYLFSSVKID 902
            + ++F+  G  S A+ G +    I +F F GI  GY ++R +  + GT + + SV  +     P  + +++ +  F +W +K T    I   F +L++W  + VP +LL  +F        YPVR N IPR IP  K+    +L ++  G +PF  +F +L F LSS  LG  Y                         Y  L +E++ WWW++        LY F+Y   ++ F +  +        Y  +SL+ ++ + L   +IGFL + +F   ++S++  D
Sbjct:  375 ILMVFSVAGLTSIATPGGMAIASILIFSFTGIFNGYSSMRTYIMLGGTRKLYNSVITTT--LIPFTILLLMFIGYFQVWSNKFTYGASIGTVFFILAMWLLVCVPCSLLSSYFVRTWPPAEYPVRINPIPRFIPTAKWYQNQYLHMILGGIIPFVIIFTDLSFFLSSWVLGEHYSYSLSFALTFILMIISIVETNMIIEYYQLSLENYNWWWRSLLGPMVTGLYTFIY---FIYFGITRIETEGVGFYYFMFSLVFSILVSLFCSSIGFLGNLWFTKKIYSTLHFD 655          
BLAST of EY664966 vs. ExPASy Swiss-Prot
Match: TMN3_YEAST (Transmembrane 9 superfamily member 3 OS=Saccharomyces cerevisiae GN=TMN3 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.817e-18
Identity = 63/235 (26.81%), Postives = 104/235 (44.26%), Query Frame = 3
Query:  240 PGIVFVILTVLNFVLWGSKSTGALPISLYFVLLSLWFCISVPLTLLGGFF------------GTRAEEITYPVRTNQIPREIPARKYPSWLLVLGAGTLPFGTLFIELFFILSSIWLGR--FYYVFGFXXXXXXXXXXXXXXXXXXXTY--MHLCVEDW----RWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSALLYLGYSLIMAVAIMLGTRTIGFLTSFYFVHYLF 884
            PGIV V   +LN ++W   ST ALP       +S++F + +PL+L GG              G   +E         +P+         +  +   G  P   +++E+ ++  S+WL +  FYY +GF                   +Y  M  C ED      W WK F    S  +Y+ LYS+ Y +F + ++ G  S L+ + YSLI  V   LG   + +LT+ +F++ ++
Sbjct:  467 PGIVMVSTFLLNSIVWAHDSTSALPFKTIVFFMSIYFIVCIPLSLFGGIVANNIPLPQYWLSGITKDESNSDGNGLFVPKSRAKFNPLVYCGIYLCGIFPLLVIYVEMQYVYKSLWLEKTTFYYFYGFLFLSIILLCVLTMEISIIGSYLLMRFCFEDKVVRNNWRWKCFEMGFSGGVYMELYSL-YYIFAVLNIHGFSSILISICYSLIFNVMCSLGLGALSYLTASWFINKIY 700          
The following BLAST results are available for this feature:
BLAST of EY664966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
TM9S3_HUMAN2.305e-3129.30Transmembrane 9 superfamily member 3 OS=Homo sapie... [more]
PHG1C_DICDI2.818e-2926.92Putative phagocytic receptor 1c OS=Dictyostelium d... [more]
TMN3_YEAST3.817e-1826.81Transmembrane 9 superfamily member 3 OS=Saccharomy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664966 ID=EY664966; Name=EY664966; organism=Citrus sinensis; type=EST; length=923bp
GCACGCCCAGTTCCTGGTCCGNATTCCCGGCCCGACCCACGCGTCCGATT
GTCACTATCATATTTGCAGCCTTGGGTTTCATGTCACCTGCTTCACGTGG
AATGTTACTGACAGGAATGATATTTCTTTTCCTTTTCTTGGGTATTGCTG
CTGGTTATGTTGCTGTACGAATGTGGAGAACAATCAAGGGAACTTCTGAA
GGGTGGAGATCAGTTGCCTGGTCTGCTGCATGCTTCTTCCCTGGAATTGT
CTTTGTTATCCTAACAGTATTAAATTTCGTTCTTTGGGGCAGTAAGAGTA
CCGGTGCTCTTCCCATTTCCTTATATTTTGTGCTCTTGTCCCTCTGGTTC
TGCATTTCTGTGCCACTTACTCTCTTGGGTGGATTCTTTGGGACGCGAGC
TGAGGAAATAACGTATCCTGTGCGAACCAACCAGATTCCCAGGGAAATTC
CTGCTCGCAAGTATCCATCATGGCTTCTTGTGCTTGGTGCAGGAACCCTT
CCGTTTGGAACCCTCTTTATAGAACTTTTCTTCATTCTTTCTAGCATTTG
GCTAGGAAGGTTCTATTATGTCTTTGGTTTTCTGCTGATAGTTCTTTTGT
TGCTGGTTGTTGTTTGCGCTGAAGTGTCTGTGGTCCTAACATACATGCAT
CTTTGTGTGGAGGATTGGCGTTGGTGGTGGAAGGCTTTCTTTGCTTCAGG
ATCAGTTGCACTGTATGTGTTCCTGTACTCTATCAACTATTTGGTATTTG
ACCTGCAGAGTTTGAGTGGACCCGTGTCTGCTCTACTATATCTTGGTTAT
TCATTAATCATGGCAGTCGCAATCATGTTGGGCACCCGCACCATTGGCTT
CCTTACGTCTTTTTACTTCGTCCATTACCTTTTCTCGTCTGTAAAGATTG
ACTGAAAAATTATGTTTGGGAAA
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