FC871821
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871821 vs. ExPASy Swiss-Prot
Match: SODC_DROOR (Superoxide dismutase [Cu-Zn] OS=Drosophila orena GN=Sod PE=3 SV=3) HSP 1 Score: 101.293 bits (251), Expect = 4.436e-25 Identity = 46/87 (52.87%), Postives = 57/87 (65.52%), Query Frame = 2
Query: 251 PTLTLLGKEHGPPEDDNRHAGDLRNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELKLKTGNAGGKVSCGI 511
P GKEHG P D+NRH GDL N+ D ++ D++I L G +SIIGR VV HAD DDLG+GGHEL TGNAG ++ CG+
Sbjct: 61 PHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSRITLFGADSIIGRTVVVHADADDLGKGGHELSKSTGNAGARIGCGV 147 HSP 2 Score: 34.6538 bits (78), Expect = 4.436e-25 Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 1
Query: 217 GNTKNGCMSTGPHFNPARK 273
G+ NGCMS+GPHFNP K
Sbjct: 50 GDNTNGCMSSGPHFNPYGK 68
BLAST of FC871821 vs. ExPASy Swiss-Prot
Match: SODC_DROER (Superoxide dismutase [Cu-Zn] OS=Drosophila erecta GN=Sod PE=3 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 5.774e-25 Identity = 45/81 (55.56%), Postives = 56/81 (69.14%), Query Frame = 2
Query: 269 GKEHGPPEDDNRHAGDLRNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELKLKTGNAGGKVSCGI 511
GKEHG P D+NRH GDL N+ D ++ D++I L G +SIIGR VV HAD DDLG+GGHEL TGNAG ++ CG+
Sbjct: 67 GKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSKITLFGADSIIGRTVVVHADADDLGKGGHELSKSTGNAGARIGCGV 147 HSP 2 Score: 34.6538 bits (78), Expect = 5.774e-25 Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 1
Query: 217 GNTKNGCMSTGPHFNPARK 273
G+ NGCMS+GPHFNP K
Sbjct: 50 GDNTNGCMSSGPHFNPHGK 68
BLAST of FC871821 vs. ExPASy Swiss-Prot
Match: SODC_CAVPO (Superoxide dismutase [Cu-Zn] OS=Cavia porcellus GN=SOD1 PE=1 SV=3) HSP 1 Score: 103.605 bits (257), Expect = 9.781e-25 Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 2
Query: 251 PTLTLLGKEHGPPEDDNRHAGDLRNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELKLKTGNAGGKVSCGI 511
P L K+HG P+D+ RH GDL NV G DG A ++ D+ I LSG NSIIGR +V H PDDLG+GG+E KTGNAG +++CG+
Sbjct: 62 PHFNPLSKKHGGPQDEERHVGDLGNVTAGADGVANVSIEDSLISLSGANSIIGRTMVVHEKPDDLGKGGNEESTKTGNAGSRLACGV 148 HSP 2 Score: 31.187 bits (69), Expect = 9.781e-25 Identity = 11/20 (55.00%), Postives = 13/20 (65.00%), Query Frame = 1
Query: 217 GNTKNGCMSTGPHFNPARKR 276
G+ GC S GPHFNP K+
Sbjct: 51 GDNTQGCTSAGPHFNPLSKK 70
BLAST of FC871821 vs. ExPASy Swiss-Prot
Match: SODE_BRUPA (Extracellular superoxide dismutase [Cu-Zn] OS=Brugia pahangi PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.135e-24 Identity = 49/90 (54.44%), Postives = 59/90 (65.56%), Query Frame = 2
Query: 251 PTLTLLGKEHGPPEDDNRHAGDLRNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELK---LKTGNAGGKVSCGI 511
P K HG P D+ RH GDL N+ G DGTA + D + L GPNSIIGR++V HAD DDLG+G + K LKTGNAGG+V+CGI
Sbjct: 105 PHFNPYNKTHGDPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVHADQDDLGKGVGDKKDESLKTGNAGGRVACGI 194 HSP 2 Score: 35.4242 bits (80), Expect = 2.135e-24 Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 1
Query: 217 GNTKNGCMSTGPHFNPARK 273
G+T NGC+S GPHFNP K
Sbjct: 94 GDTTNGCISAGPHFNPYNK 112
BLAST of FC871821 vs. ExPASy Swiss-Prot
Match: SODC_CERCA (Superoxide dismutase [Cu-Zn] OS=Ceratitis capitata GN=Sod PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 6.187e-24 Identity = 45/87 (51.72%), Postives = 53/87 (60.92%), Query Frame = 2
Query: 251 PTLTLLGKEHGPPEDDNRHAGDLRNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELKLKTGNAGGKVSCGI 511
P G HG P D NRH GDL N+ DG + D I L G NSI+GR +V HADPDDLG+GGHEL TGNAG ++ CG+
Sbjct: 61 PHFNPYGNSHGAPSDLNRHLGDLGNIEASGDGATKVEISDKLITLFGENSIVGRTIVVHADPDDLGKGGHELSKTTGNAGARLGCGV 147 HSP 2 Score: 31.5722 bits (70), Expect = 6.187e-24 Identity = 11/16 (68.75%), Postives = 12/16 (75.00%), Query Frame = 1
Query: 217 GNTKNGCMSTGPHFNP 264
G+ NGC S GPHFNP
Sbjct: 50 GDNTNGCTSAGPHFNP 65
BLAST of FC871821 vs. ExPASy Swiss-Prot
Match: SODC_SCHMA (Superoxide dismutase [Cu-Zn] OS=Schistosoma mansoni GN=SOD PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.048e-23 Identity = 45/80 (56.25%), Postives = 56/80 (70.00%), Query Frame = 2
Query: 272 KEHGPPEDDNRHAGDLRNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELKLKTGNAGGKVSCGI 511
+EHG PED RH GDL NV G DG A + D I L+G +SIIGR +V H + DDLG+GGHEL TGNAGG+++CG+
Sbjct: 68 QEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRTMVIHENEDDLGRGGHELSKVTGNAGGRLACGV 147 HSP 2 Score: 31.5722 bits (70), Expect = 1.048e-23 Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 1
Query: 217 GNTKNGCMSTGPHFNPARK 273
G+T NGC S G HFNP ++
Sbjct: 50 GDTTNGCTSAGAHFNPTKQ 68
BLAST of FC871821 vs. ExPASy Swiss-Prot
Match: SODC_BRUPA (Superoxide dismutase [Cu-Zn] OS=Brugia pahangi GN=SODC PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.362e-23 Identity = 48/90 (53.33%), Postives = 58/90 (64.44%), Query Frame = 2
Query: 251 PTLTLLGKEHGPPEDDNRHAGDLRNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELK---LKTGNAGGKVSCGI 511
P K HG P D+ RH GDL N+ G DGTA + D + L GPNSIIGR++V HAD DDLG+G + K LKTGNAG +V+CGI
Sbjct: 62 PHFNPYNKTHGGPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVHADQDDLGKGVGDKKDESLKTGNAGARVACGI 151 HSP 2 Score: 35.4242 bits (80), Expect = 1.362e-23 Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 1
Query: 217 GNTKNGCMSTGPHFNPARK 273
G+T NGC+S GPHFNP K
Sbjct: 51 GDTTNGCISAGPHFNPYNK 69
BLAST of FC871821 vs. ExPASy Swiss-Prot
Match: SODC_CALJA (Superoxide dismutase [Cu-Zn] OS=Callithrix jacchus GN=SOD1 PE=2 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 1.775e-23 Identity = 46/87 (52.87%), Postives = 60/87 (68.97%), Query Frame = 2
Query: 251 PTLTLLGKEHGPPEDDNRHAGDLRNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELKLKTGNAGGKVSCGI 511
P L ++HG PED+ RH GDL NV G DG A ++ D+ I LSG +SIIGR +V H DDLG+GG+E KTGNAGG+++CG+
Sbjct: 63 PHFNPLSRKHGGPEDEERHVGDLGNVTAGKDGVAKVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGV 149 HSP 2 Score: 30.0314 bits (66), Expect = 1.775e-23 Identity = 10/20 (50.00%), Postives = 13/20 (65.00%), Query Frame = 1
Query: 217 GNTKNGCMSTGPHFNPARKR 276
G+ GC S GPHFNP ++
Sbjct: 52 GDNTQGCTSAGPHFNPLSRK 71
BLAST of FC871821 vs. ExPASy Swiss-Prot
Match: SODC_PIG (Superoxide dismutase [Cu-Zn] OS=Sus scrofa GN=SOD1 PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.775e-23 Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 2
Query: 272 KEHGPPEDDNRHAGDLRNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELKLKTGNAGGKVSCGI 511
K+HG P+D RH GDL NV G DG AT + D+ I LSG +SIIGR +V H PDDLG+GG+E KTGNAG +++CG+
Sbjct: 69 KKHGGPKDQERHVGDLGNVTAGKDGVATVYIEDSVIALSGDHSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSRLACGV 148 HSP 2 Score: 31.187 bits (69), Expect = 1.775e-23 Identity = 11/20 (55.00%), Postives = 13/20 (65.00%), Query Frame = 1
Query: 217 GNTKNGCMSTGPHFNPARKR 276
G+ GC S GPHFNP K+
Sbjct: 51 GDNTQGCTSAGPHFNPESKK 70
BLAST of FC871821 vs. ExPASy Swiss-Prot
Match: SODC_ONCVO (Superoxide dismutase [Cu-Zn] OS=Onchocerca volvulus GN=sod-1 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.907e-23 Identity = 48/90 (53.33%), Postives = 57/90 (63.33%), Query Frame = 2
Query: 251 PTLTLLGKEHGPPEDDNRHAGDLRNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELK---LKTGNAGGKVSCGI 511
P K HG D+ RH GDL N+ G DGTA ++ D I L GPNSIIGR++V HAD DDLG+G K LKTGNAG +V+CGI
Sbjct: 62 PHFNPYNKTHGDRTDEIRHVGDLGNIEAGADGTAHISISDQHIQLLGPNSIIGRSIVVHADQDDLGKGVGAKKDESLKTGNAGARVACGI 151 HSP 2 Score: 35.4242 bits (80), Expect = 3.907e-23 Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 1
Query: 217 GNTKNGCMSTGPHFNPARK 273
G+T NGC+S GPHFNP K
Sbjct: 51 GDTTNGCISAGPHFNPYNK 69 The following BLAST results are available for this feature:
BLAST of FC871821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871821 ID=FC871821; Name=FC871821; organism=Citrus sinensis; type=EST; length=513bpback to top |