EY664829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664829 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 339.732 bits (870), Expect = 1.430e-92 Identity = 182/262 (69.47%), Postives = 203/262 (77.48%), Query Frame = 2 Query: 146 GAATSVPSSSFFGTSLKKVSSRIPPSKVPSAS---FKITA-EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIXQRYREAADIIXKGKMCCLMINDLDAXAGRMGGTT----HSQLTTNG*RHTHEHC**PNLCPTPCMYNKXGDP 907 GA S P++ F G LKK + S++ FK+ A E+DE KQT QDRWKGLAYD SDDQQDITRGKG VDSLFQAP G GTH AV+SSY+Y+SQGLRTY+ DNT+ G YIAPAFMDKLVVHI+KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI QRYREAADII KGKMCCL INDLDA AGRMGGTT ++Q+ + ++ P P MYNK +P Sbjct: 10 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQDRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADN---PTNVQLPGMYNKEDNP 267
BLAST of EY664829 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 315.464 bits (807), Expect = 1.456e-90 Identity = 161/239 (67.36%), Postives = 185/239 (77.41%), Query Frame = 2 Query: 113 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSS-RIPPSKVPSASFKITAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIXQRYREAADIIXKGKMCCLMINDLDAXAGRMGGTTHSQLTTN 826 A PL+ NGS A SVP+S F G+SLKK ++ R P S S + +T + EN++ D+W LA D SDDQ DI RGKG VDSLFQAP GTH + SS++Y SQGLR Y++DN + YIAPAFMDKLVVHITKNF++LPNIK+PLILG+WGGKGQGKSFQCELVFAK+GINPIMMSAGELESGNAGEPAKLI QRYREAAD+I KGKMC L INDL+ AGRMGGTT Q T N Sbjct: 11 ATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSS---SRTTSMTVKAAENEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLEPGAGRMGGTT--QYTVN 244 HSP 2 Score: 40.0466 bits (92), Expect = 1.456e-90 Identity = 23/36 (63.89%), Postives = 25/36 (69.44%), Query Frame = 3 Query: 825 MVNATLMNIADNPTCVQLPVCTTXRETP-CSIIVTG 929 MVNATLMNIADNPT VQLP ++ IIVTG Sbjct: 247 MVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTG 282
BLAST of EY664829 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 329.717 bits (844), Expect = 1.480e-89 Identity = 178/266 (66.92%), Postives = 201/266 (75.56%), Query Frame = 2 Query: 146 GAATSVPS-SSFFGTSLKK--VSSRIP---PSKVPSASFKITA--EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIXQRYREAADIIXKGKMCCLMINDLDAXAGRMGGTT----HSQLTTNG*RHTHEHC**PNLCPTPCMYNKXGDP 907 GA S P+ SSF G L K VS+ + S ++ FK A EVDE KQT +DRWKGLAYD SDDQQDITRGKG VD+LFQAPMG GTH AV+SSYDYISQG ++YN DN +DG YIA FMDKLVVH++KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI PIMMSAGELESGNAGEPAKLI QRYREA+D+I KGKM CL INDLDA AGRMGGTT ++Q+ + ++ P P MYNK +P Sbjct: 10 GAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETKQTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMSCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADN---PTNVQLPGMYNKEDNP 272
BLAST of EY664829 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 327.405 bits (838), Expect = 7.347e-89 Identity = 176/258 (68.22%), Postives = 195/258 (75.58%), Query Frame = 2 Query: 146 GAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITA---EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIXQRYREAADIIXKGKMCCLMINDLDAXAGRMGGTTHSQLTTNG*RHTHEH-C**PNLCPTPCMYNKXGDP 907 GA S P+ F G +K +K+ S ++ A E+D+ KQT DRWKGLAYD SDDQQDITRGKG VDSLFQAPMG GTH A++SSY+YISQGLR Y+ DNT+DGLYIAPAFMDKL+VH+ KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN GEPAKLI QRYREAADII KGKMCCL INDLDA AGRMGGTT + T + P P MYNK +P Sbjct: 10 GAPASTPTI-FLGKKVKNYYHG--GNKMKSRVVRVMAAKKELDQGKQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN-GEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENP 263
BLAST of EY664829 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 1.061e-87 Identity = 173/258 (67.05%), Postives = 194/258 (75.19%), Query Frame = 2 Query: 146 GAATSVPSSSFFGTSLKK-VSSRIPPSKVPSASFKITAEVDENKQTKQ--DRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIXQRYREAADIIXKGKMCCLMINDLDAXAGRMGGTTHSQLTTNG*RHTHEH-C**PNLCPTPCMYNKXGDP 907 GA S P++ F G LKK V+S + S + + T EN K+ D+WKGLAYD SDDQQDITRGKG VDSLFQAP G GTH AV+SSY+Y+SQGLR Y+ DNT+ G YIAPAFMDKLVVH++KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI QRYREAAD+I KGKMCCL INDLDA AGRMGGTT + T + P P MYNK +P Sbjct: 10 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENP 266
BLAST of EY664829 vs. ExPASy Swiss-Prot
Match: RCA_CHLRE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 2.949e-67 Identity = 125/210 (59.52%), Postives = 149/210 (70.95%), Query Frame = 2 Query: 206 SRIPPSKVPSASFKITAEVDENKQTKQDRWKGL--AYDESDDQQDITRGKGAVDSLFQAPMGTG-THYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIXQRYREAADIIXKGKMCCLMINDLDAXAGRMGGTTHSQLTTN 826 +R+ V A ++ A + + RW+ + D SDDQQDITRG+ VD LFQ G G TH AV+SS +Y+SQ ++N N DG YI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQGK+FQC L + K+GI PI+MSAGELESGNAGEPAKLI RYREA+DII KG+MC L INDLDA AGRMG TT Q T N Sbjct: 18 ARVATRSVRRAQLQVVAP----SRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLGIAPIVMSAGELESGNAGEPAKLIRTRYREASDIIKKGRMCSLFINDLDAGAGRMGDTT--QYTVN 219 HSP 2 Score: 40.817 bits (94), Expect = 2.949e-67 Identity = 23/36 (63.89%), Postives = 24/36 (66.67%), Query Frame = 3 Query: 825 MVNATLMNIADNPTCVQLPVCTTXRETP-CSIIVTG 929 MVNATLMNIADNPT VQLP E P I+ TG Sbjct: 222 MVNATLMNIADNPTNVQLPGVYKNEEIPRVPIVCTG 257
BLAST of EY664829 vs. ExPASy Swiss-Prot
Match: RCA_ANASC (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain CA / ATCC 33047) GN=rca PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.163e-40 Identity = 73/117 (62.39%), Postives = 90/117 (76.92%), Query Frame = 2 Query: 476 YIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIXQRYREAADII-XKGKMCCLMINDLDAXAGRMGGTTHSQLTT 823 YIAP F+DKL VHITKNF++LP ++VPLILGI G KG+GK+FQCEL F KMG+ ++S GELES +AG+PA+LI RYRE A++I +GKMC LMINDLDA AGR T + T Sbjct: 4 YIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLISGGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNT 120 HSP 2 Score: 40.0466 bits (92), Expect = 1.163e-40 Identity = 25/38 (65.79%), Postives = 26/38 (68.42%), Query Frame = 3 Query: 825 MVNATLMNIADNPTCVQLP---VCTTXRETPCSIIVTG 929 +VNATLMNIADNPT VQLP T R P IIVTG Sbjct: 122 LVNATLMNIADNPTDVQLPGSYDSTPLRRVP--IIVTG 157
BLAST of EY664829 vs. ExPASy Swiss-Prot
Match: RCA_ANASP (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain PCC 7120) GN=rca PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.691e-40 Identity = 73/117 (62.39%), Postives = 90/117 (76.92%), Query Frame = 2 Query: 476 YIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIXQRYREAADII-XKGKMCCLMINDLDAXAGRMGGTTHSQLTT 823 YIAP F+DKL VHITKNF+++P ++VPLILGI G KG+GK+FQCEL F KMGI ++S GELES +AG+PA+LI RYRE A++I +GKMC LMINDLDA AGR T + T Sbjct: 4 YIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLISGGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNT 120 HSP 2 Score: 38.1206 bits (87), Expect = 5.691e-40 Identity = 24/38 (63.16%), Postives = 25/38 (65.79%), Query Frame = 3 Query: 825 MVNATLMNIADNPTCVQLP---VCTTXRETPCSIIVTG 929 +VNATLMNIADNPT VQLP R P IIVTG Sbjct: 122 LVNATLMNIADNPTDVQLPGSYDSNPIRRVP--IIVTG 157
BLAST of EY664829 vs. ExPASy Swiss-Prot
Match: RCA_ARAHY (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Arachis hypogaea GN=RCA PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.321e-32 Identity = 88/165 (53.33%), Postives = 90/165 (54.55%), Query Frame = 2 Query: 299 GLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIXQRYREAADIIXKGKMCCLMINDLDAXAGRM 793 GLAYD SDDQQDITRG VDSLFQAPM GTHYAVMSSY+YISQGLR VPLILGIWGGK MGINPIMMSAGELESGNAGEPA KMCCL INDLDA AGR+ Sbjct: 1 GLAYDISDDQQDITRGM--VDSLFQAPMNDGTHYAVMSSYEYISQGLR------------------------------------VPLILGIWGGK--------------MGINPIMMSAGELESGNAGEPA-----------------KMCCLFINDLDAGAGRV 96
BLAST of EY664829 vs. ExPASy Swiss-Prot
Match: RCA_VITSX (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.114e-11 Identity = 38/61 (62.30%), Postives = 40/61 (65.57%), Query Frame = 2 Query: 623 KMGINPIMMSAGELESGNAGEPAKLIXQRYREAADIIXKGKMCCLMINDLDAXAGRMGGTT 805 +MGINPIMMSAGELESGNAGEPA KMCCL INDLDA AGR+G T Sbjct: 15 RMGINPIMMSAGELESGNAGEPA-----------------KMCCLFINDLDAGAGRIGVCT 58 The following BLAST results are available for this feature:
BLAST of EY664829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >EY664829 ID=EY664829; Name=EY664829; organism=Citrus sinensis; type=EST; length=948bpback to top |