EY664825
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664825 vs. ExPASy Swiss-Prot
Match: RBSC_SOLTU (Ribulose bisphosphate carboxylase small chain 2C, chloroplastic OS=Solanum tuberosum GN=RBCS-2C PE=3 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 3.394e-73 Identity = 129/180 (71.67%), Postives = 154/180 (85.56%), Query Frame = 2 Query: 68 ASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 607 ASS++SS VAT R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDAT VL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 2 ASSVMSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY664825 vs. ExPASy Swiss-Prot
Match: RBSA_SOLTU (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum tuberosum GN=RBCS-2A PE=3 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 3.394e-73 Identity = 129/180 (71.67%), Postives = 154/180 (85.56%), Query Frame = 2 Query: 68 ASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 607 ASS++SS VAT R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDAT VL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 2 ASSVMSSAAVAT--RGNGAQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY664825 vs. ExPASy Swiss-Prot
Match: RBS4_SOYBN (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Glycine max GN=RBCS-4 PE=3 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 5.790e-73 Identity = 133/179 (74.30%), Postives = 146/179 (81.56%), Query Frame = 2 Query: 68 ASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 604 ASSMISS V T NRA A MVAPFTGLKS + P T+KTNNDITSIASNGGRVQCM+VWPP G KKFETLSYLP L D L KE+ YLLR GWIPCLEFELE G+VYREH+ S GYYDGRYWTMWKLPM+GCTDA+ VLKE+ E + YP+ F+RIIGFDN RQVQCISF+A KPP Sbjct: 2 ASSMISSPAVTTVNRAG---AGMVAPFTGLKSMAGLP-TRKTNNDITSIASNGGRVQCMQVWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSLGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPP 176
BLAST of EY664825 vs. ExPASy Swiss-Prot
Match: RBS_GLYTO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tomentella GN=RBCS PE=3 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 9.876e-73 Identity = 132/179 (73.74%), Postives = 146/179 (81.56%), Query Frame = 2 Query: 68 ASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 604 ASSMISS V T NRA A VAPFTGLKS + FP T+KTNNDI SIASNGGRVQCM+VWP TG KKFETLSYLP L D L KE+ YLLR GWIPCLEFELE G+VYRE+H SPGYYDGRYWTMWKLP++GCTDA+ VLKE+ E + YP+ F+RIIGFDN RQVQCISF+A KPP Sbjct: 2 ASSMISSPAVTTVNRAG---AGTVAPFTGLKSMAGFP-TRKTNNDIASIASNGGRVQCMQVWPTTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPVFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPP 176
BLAST of EY664825 vs. ExPASy Swiss-Prot
Match: RBS6_MESCR (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-6 PE=3 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 1.685e-72 Identity = 124/180 (68.89%), Postives = 155/180 (86.11%), Query Frame = 2 Query: 68 ASSMISSTTVAT--ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 601 ASSM+S+ VAT A+R++ AQASMVAPFTGLKS SAFP T+K++ND++++ SNGG+VQCM+VWPP G KKFETLSYLPPLS+E+LLKE+ YLL +GW+PCLEFE G+VYREH ++PGYYDGRYWTMWKLPM+GCTD + V+ E+ E +K YP +F+RIIGFDN RQVQC+SF+A KP Sbjct: 2 ASSMLSNAAVATTAASRSAGAQASMVAPFTGLKSVSAFPVTRKSSNDLSTVPSNGGKVQCMQVWPPLGKKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFIAYKP 181
BLAST of EY664825 vs. ExPASy Swiss-Prot
Match: RBS1_SOLTU (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum tuberosum GN=RBCS-1 PE=3 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 1.685e-72 Identity = 128/181 (70.72%), Postives = 153/181 (84.53%), Query Frame = 2 Query: 68 ASSMISSTTVATANRASLAQA-SMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 607 ASS+ISS VAT R ++ QA SM+APFTGLKS++ FP ++K N DITSIASNGGRV+CM+VWPP +KK+ETLSYLP L+DE LLKE+ YLL++GW+PCLEFE E G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDAT VL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 2 ASSVISSAAVAT--RTNVTQAGSMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQECKKSYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of EY664825 vs. ExPASy Swiss-Prot
Match: RBS_TOBAC (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Nicotiana tabacum GN=RBCS PE=1 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 2.200e-72 Identity = 127/180 (70.56%), Postives = 153/180 (85.00%), Query Frame = 2 Query: 68 ASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 607 ASS++SS VAT R+++AQA+MVAPFTGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP KK+ETLSYLP LS E LL E+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDAT VL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 2 ASSVLSSAAVAT--RSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY664825 vs. ExPASy Swiss-Prot
Match: RBS1_NICSY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Nicotiana sylvestris GN=RBCS PE=2 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 2.200e-72 Identity = 127/180 (70.56%), Postives = 153/180 (85.00%), Query Frame = 2 Query: 68 ASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 607 ASS++SS VAT R+++AQA+MVAPFTGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP KK+ETLSYLP LS E LL E+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDAT VL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 2 ASSVLSSAAVAT--RSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY664825 vs. ExPASy Swiss-Prot
Match: RBS_STELP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Stellaria longipes GN=RBCS PE=2 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 2.873e-72 Identity = 129/178 (72.47%), Postives = 151/178 (84.83%), Query Frame = 2 Query: 68 ASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 601 ASS++SS VAT R++ AQASMVAPFTGLKS+++FP ++KTN DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LS E LL EI YLL++GW+PCLEFE E G+VYREH SSPGYYDGRYWTMWKLPM+GCTDAT V EV E +K YP + +RIIGFDN RQVQCISF+A KP Sbjct: 2 ASSIMSSAAVAT--RSNGAQASMVAPFTGLKSNASFPVSRKTNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSSEQLLSEIEYLLKNGWVPCLEFETEHGFVYREHTSSPGYYDGRYWTMWKLPMFGCTDATQVAAEVQEAKKAYPDAHIRIIGFDNVRQVQCISFIAYKP 177
BLAST of EY664825 vs. ExPASy Swiss-Prot
Match: RBS_CAPAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 3.753e-72 Identity = 128/178 (71.91%), Postives = 149/178 (83.71%), Query Frame = 2 Query: 68 ASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 601 ASS++S+ TVAT A+ AQASM+A F GLKS+++FP T+K + DITSIASNGGRV+CM VWPP KK+ETLSYLP LSDE LLKEI YLL+ GW+PCLEFE E G+VYREHH SPGYYDGRYWTMWKLPM+GCTDAT VL EV E +K YP +++RIIGFDN RQVQCISF+A KP Sbjct: 2 ASSVMSTATVATG--ANAAQASMIASFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKP 177 The following BLAST results are available for this feature:
BLAST of EY664825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY664825 ID=EY664825; Name=EY664825; organism=Citrus sinensis; type=EST; length=810bpback to top |