EH117794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR3_ARATH (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana GN=At3g15720 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.125e-14 Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = -2 Query: 22 PTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 255 PTA+ F C NL++ L ++S HI + C V IS+L + AP SPNTDGI + AS V +++ I+ TGDDCI+I Sbjct: 138 PTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAI 215
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR2_CHAOB (Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.919e-14 Identity = 36/81 (44.44%), Postives = 53/81 (65.43%), Query Frame = -2 Query: 22 RHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 264 R+ PTAI K++ V+ L ++NS + H+ F C V I L++ AP +SPNTDGI I AS+ ++ ++GTGDDCI+I Sbjct: 180 RNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAI 260
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR1_ARATH (Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.919e-14 Identity = 33/82 (40.24%), Postives = 52/82 (63.41%), Query Frame = -2 Query: 22 CRHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 267 C PT++ F KN+++ + VN++ H+ V I N+++ APAESPNTDGIH+S + V + +S + TGDDC+S+ Sbjct: 165 CNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSV 246
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR6_ARATH (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.273e-14 Identity = 36/82 (43.90%), Postives = 48/82 (58.54%), Query Frame = -2 Query: 22 CRHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 267 C ++ F N+K+ L +NSQ+ HI N V I ++V A SPNTDGIH+ +S V + NS +GTGDDCISI Sbjct: 149 CPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISI 230
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR3_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.121e-13 Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = -2 Query: 22 CRHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 267 C+ P ++ N +V + ++NS+ H+ C ++I ++ V AP +SPNTDGIH+ S GV + N+++G GDDCISI Sbjct: 157 CKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISI 238
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR2_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.770e-13 Identity = 31/82 (37.80%), Postives = 51/82 (62.20%), Query Frame = -2 Query: 22 CRHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 267 C+ P ++ N +V + ++NS+ H+ C ++I ++ V AP +SPNTDGIH+ S G+ + N+++G GDDCISI Sbjct: 157 CKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISI 238
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR2_JUNAS (Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.618e-13 Identity = 33/78 (42.31%), Postives = 50/78 (64.10%), Query Frame = -2 Query: 22 PTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 255 PTAI K++ V+ L + NS + H+ F C V I +++ AP +SPNTDGI I AS+ E++ +GTGDDC+++ Sbjct: 184 PTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTDGIDIFASKRFEIEKCTIGTGDDCVAV 261
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR2_ARATH (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana GN=At3g07850 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 3.618e-13 Identity = 35/85 (41.18%), Postives = 48/85 (56.47%), Query Frame = -2 Query: 22 TNPCRHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 276 T C P I F N K+ S+ NS+ H+ NC + +S++ + AP ES NTDGIHI S GV + + + TGDDC+SI Sbjct: 182 TGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSI 266
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR1_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.725e-13 Identity = 31/82 (37.80%), Postives = 51/82 (62.20%), Query Frame = -2 Query: 22 CRHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 267 C+ P ++ N +V + ++NS+ H+ C ++I ++ V AP +SPNTDGIH+ S G+ + N+++G GDDCISI Sbjct: 157 CKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISI 238
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.172e-13 Identity = 35/85 (41.18%), Postives = 50/85 (58.82%), Query Frame = -2 Query: 22 NP-CRHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 273 NP C+HA + F K+ V+ + +NS+ HI C + ++ V AP S NTDGIH+ S+GV + N+ + TGDDCISI Sbjct: 121 NPNCKHAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGVTITNTKIATGDDCISI 205 The following BLAST results are available for this feature:
BLAST of EH117794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >EH117794 ID=EH117794; Name=EH117794; organism=Citrus sinensis; type=EST; length=298bpback to top |