EH117794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR_BRANA (Polygalacturonase OS=Brassica napus PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.060e-13 Identity = 30/85 (35.29%), Postives = 52/85 (61.18%), Query Frame = -2 Query: 22 TNPCRHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 276 T C+ P ++ F N +++ + ++++ H + + N+++IAPAESPNTDGIH+ GV++ N+ + TGDDCIS+ Sbjct: 131 TFECKKLPISVRFDFVDNAEIKDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGDDCISV 215
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.063e-12 Identity = 30/82 (36.59%), Postives = 45/82 (54.88%), Query Frame = -2 Query: 22 CRHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 267 C P ++F+ N ++ + ++S+ H+ C + V APA SPNTDGIH+S S V + +S TGDDCIS+ Sbjct: 137 CNKLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISV 218
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR_PRUPE (Polygalacturonase OS=Prunus persica PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.912e-12 Identity = 33/82 (40.24%), Postives = 43/82 (52.44%), Query Frame = -2 Query: 22 CRHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 267 C T + F N+ V L +NSQ HI + V + + V SPNTDGIH+ S GV + NS + TGDDC+SI Sbjct: 143 CPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSI 224
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.777e-11 Identity = 33/78 (42.31%), Postives = 44/78 (56.41%), Query Frame = -2 Query: 22 PTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 255 P I F N +Q + +S+ HI C + + L++ AP ESPNTDGIH+ S GV + S + TGDDCISI Sbjct: 149 PVNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISI 226
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.777e-11 Identity = 33/78 (42.31%), Postives = 44/78 (56.41%), Query Frame = -2 Query: 22 PTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 255 P I F N +Q + +S+ HI C + + L++ AP ESPNTDGIH+ S GV + S + TGDDCISI Sbjct: 149 PVNIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISI 226 The following BLAST results are available for this feature:
BLAST of EH117794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EH117794 ID=EH117794; Name=EH117794; organism=Citrus sinensis; type=EST; length=298bpback to top |