EG358373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: RH8_ORYSJ (DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp. japonica GN=Os02g0641800 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.911e-14 Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAY---QICHE 374 F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ + + ++L TRELA Q+C E Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQEKNAIQVVILVPTRELALQTSQVCKE 224
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A2_CHICK (Eukaryotic initiation factor 4A-II OS=Gallus gallus GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.496e-14 Identity = 45/83 (54.22%), Postives = 50/83 (60.24%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E + + ALVL TRELA QI Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDLKETQALVLAPTRELAQQI 117
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DDX6_DROME (Putative ATP-dependent RNA helicase me31b OS=Drosophila melanogaster GN=me31B PE=1 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 3.261e-14 Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAY---QICHEFER 383 F +F LK ELL I + G+E PS +Q IP A+ G DV+ +AK+G GKT + + L+Q +P + ALV+ TRELA QIC E + Sbjct: 60 FEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQIDPTKDYIQALVMVPTRELALQTSQICIELAK 151
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DDX6_DICDI (Probable ATP-dependent RNA helicase ddx6 OS=Dictyostelium discoideum GN=ddx6 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.261e-14 Identity = 38/93 (40.86%), Postives = 58/93 (62.37%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAY---QICHEFERF 386 F D LK +LLR I + G+ PS +Q + IP A+ G D++ +AK+G GKTA F++ L++T+P + L+L TRELA Q+C E ++ Sbjct: 51 FDDLHLKRDLLRGIFEKGYVKPSPIQEKAIPIALAGRDIMARAKNGTGKTASFLIPALEKTDPTKDVIQVLILVPTRELALQTSQVCKELGKY 143
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A_PHANO (ATP-dependent RNA helicase eIF4A OS=Phaeosphaeria nodorum GN=TIF1 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.258e-14 Identity = 42/78 (53.85%), Postives = 49/78 (62.82%), Query Frame = 3 Query: 132 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 LK ELLR + GFE PS +Q I I G DVI QA+SG GKTA F +STLQ+ + N AL+L TRELA QI Sbjct: 30 LKAELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISTLQKIDSNVKACQALILAPTRELAQQI 107
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A_ASPTN (ATP-dependent RNA helicase eIF4A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tif1 PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 4.258e-14 Identity = 42/86 (48.84%), Postives = 51/86 (59.30%), Query Frame = 3 Query: 108 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 + F LK ELLR + GFE PS +Q I I G DVI QA+SG GKTA F +S LQ+ +PN AL++ TRELA QI Sbjct: 22 TDSFDSMELKAELLRGVYAYGFERPSAIQQRAIMPIIKGNDVIAQAQSGTGKTATFSISALQKIDPNLKACQALIVAPTRELAQQI 107
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A2_RAT (Eukaryotic initiation factor 4A-II OS=Rattus norvegicus GN=Eif4a2 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.258e-14 Identity = 45/83 (54.22%), Postives = 49/83 (59.04%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQI 117
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A2_PONAB (Eukaryotic initiation factor 4A-II OS=Pongo abelii GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.258e-14 Identity = 45/83 (54.22%), Postives = 49/83 (59.04%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQI 117
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A2_MOUSE (Eukaryotic initiation factor 4A-II OS=Mus musculus GN=Eif4a2 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 4.258e-14 Identity = 45/83 (54.22%), Postives = 49/83 (59.04%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQI 117
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A2_MACFA (Eukaryotic initiation factor 4A-II OS=Macaca fascicularis GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.258e-14 Identity = 45/83 (54.22%), Postives = 49/83 (59.04%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI Sbjct: 36 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQI 118 The following BLAST results are available for this feature:
BLAST of EG358373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 237
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Sequences
The
following sequences are available for this feature:
EST sequence >EG358373 ID=EG358373; Name=EG358373; organism=Citrus sinensis; type=EST; length=388bpback to top |