EG358372

Overview
NameEG358372
Unique NameEG358372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length388
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2888 contig Csv1_Contig2888:710..1097. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358372 vs. ExPASy Swiss-Prot
Match: BH064_ARATH (Transcription factor bHLH64 OS=Arabidopsis thaliana GN=BHLH64 PE=2 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 1.718e-23
Identity = 59/119 (49.58%), Postives = 74/119 (62.18%), Query Frame = 1
Query:   31 MDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEKKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 387
            +  KRK            + K   E +++   KG  N    E   ++ K ++ K  ++    DYIHVRARRGQATD HSLAER RREKIS++MK LQ +VPGC+KVTGKA MLDEIINY
Sbjct:  121 LKNKRKPEVKTREE-QKTEKKIKVEAETESSMKGKSNMGNTEASSDTSK-ETSKGASENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINY 237          
BLAST of EG358372 vs. ExPASy Swiss-Prot
Match: BEE2_ARATH (Transcription factor BEE 2 OS=Arabidopsis thaliana GN=BEE2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.244e-23
Identity = 60/114 (52.63%), Postives = 78/114 (68.42%), Query Frame = 1
Query:   52 RTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKAD-SEKKVAKEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 387
            + N  S   + Q+K   E K++K++K  +    + E     K++ S  + + E  K DYIHVRARRG+ATD HSLAER RREKIS++MK LQ +VPGC+KVTGKA MLDEIINY
Sbjct:   80 KNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINY 193          
BLAST of EG358372 vs. ExPASy Swiss-Prot
Match: BH075_ARATH (Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.232e-22
Identity = 53/93 (56.99%), Postives = 65/93 (69.89%), Query Frame = 1
Query:  109 KSKKQKKGNVNDAKKEEKENSPKADSEKKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 387
            K  K++ G+    K+ E+E +   D  +K     PKD +HVRA+RGQATDSHSLAERVRREKI+ER+K LQ LVPGC K  G A MLD II+Y
Sbjct:   69 KGNKEESGSKRRRKRSEEEEAMNGDETQK-----PKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDY 156          
BLAST of EG358372 vs. ExPASy Swiss-Prot
Match: BH048_ARATH (Transcription factor bHLH48 OS=Arabidopsis thaliana GN=BHLH48 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.219e-22
Identity = 54/101 (53.47%), Postives = 74/101 (73.27%), Query Frame = 1
Query:   94 DPREVKSKKQKKG-NVNDAKKEEKENSPKADSEK-KVAKEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 387
            +P E  S  + +  + +  K++E+E   K+ ++K K + E  K  Y+HVRARRGQATD+HSLAER RREKI+ RMK+LQ+LVPGCDK+ G A +LDEIIN+
Sbjct:  137 EPAETDSMVENQNQSYSSGKRKEREKKVKSSTKKNKSSVESDKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINH 237          
BLAST of EG358372 vs. ExPASy Swiss-Prot
Match: BEE3_ARATH (Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.361e-20
Identity = 56/118 (47.46%), Postives = 74/118 (62.71%), Query Frame = 1
Query:   37 KKRKNRTNA-SSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEKKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 387
            KKRK+   A S+S NS   +      ++    GN++     +  +S +    K   +E  ++ +HVRARRGQATDSHS+AERVRR KI+ER+K LQ +VPGC K  G A MLDEIINY
Sbjct:   86 KKRKSLMEAVSTSENSVSDQTLSTSSAQVSINGNIST----KNNSSRRGKRSKNREEEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINY 199          
BLAST of EG358372 vs. ExPASy Swiss-Prot
Match: BEE1_ARATH (Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.379e-19
Identity = 55/117 (47.01%), Postives = 73/117 (62.39%), Query Frame = 1
Query:   37 KKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEKKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 387
            KKRK      SS  ++   D   V + +   G++   K+ +K+   + + E++V        +HVRARRGQATDSHSLAERVRR KI+ER++ LQ +VPGC K  G A MLDEIINY
Sbjct:   91 KKRKALLPTLSSSETSGVSDNTNVIATET--GSLRRGKRLKKKKEEEDEKEREV--------VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINY 197          
BLAST of EG358372 vs. ExPASy Swiss-Prot
Match: BH060_ARATH (Transcription factor bHLH60 OS=Arabidopsis thaliana GN=BHLH60 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.840e-17
Identity = 45/80 (56.25%), Postives = 58/80 (72.50%), Query Frame = 1
Query:  112 SKKQKKGNVNDAKKEEKENSPKADSEKKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVT 351
            ++  + G   D +K+ K ++ K  S ++  K P   Y+HVRARRGQATDSHSLAER RREKI+ RMK+LQ+LVPGCDK T
Sbjct:  168 NQNNRNGKRKDFEKKGKSSTKKNKSSEENEKLP---YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGT 244          
BLAST of EG358372 vs. ExPASy Swiss-Prot
Match: BH066_ARATH (Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.837e-15
Identity = 44/89 (49.44%), Postives = 59/89 (66.29%), Query Frame = 1
Query:  130 GNVNDAKKEEKENSPKADSEKKVA---KEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 387
            G +N   + + +  P+A +          PP+    +RARRGQATD HS+AER+RRE+I+ERMK LQ+LVP  +K T KA MLDEII+Y
Sbjct:  102 GLMNQQGQTQTQTQPQASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDY 189          
BLAST of EG358372 vs. ExPASy Swiss-Prot
Match: BH082_ARATH (Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.612e-13
Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 1
Query:  196 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 387
            V ++ P+    VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP  +K T KA MLDEII Y
Sbjct:   92 VVRQKPR----VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEY 150          
BLAST of EG358372 vs. ExPASy Swiss-Prot
Match: BH069_ARATH (Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.612e-13
Identity = 41/63 (65.08%), Postives = 49/63 (77.78%), Query Frame = 1
Query:  199 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 387
            A   P+    VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP  +K T KA MLDEII+Y
Sbjct:  120 ATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDY 181          
The following BLAST results are available for this feature:
BLAST of EG358372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
BH064_ARATH1.718e-2349.58Transcription factor bHLH64 OS=Arabidopsis thalian... [more]
BEE2_ARATH2.244e-2352.63Transcription factor BEE 2 OS=Arabidopsis thaliana... [more]
BH075_ARATH4.232e-2256.99Transcription factor bHLH75 OS=Arabidopsis thalian... [more]
BH048_ARATH7.219e-2253.47Transcription factor bHLH48 OS=Arabidopsis thalian... [more]
BEE3_ARATH1.361e-2047.46Transcription factor BEE 3 OS=Arabidopsis thaliana... [more]
BEE1_ARATH4.379e-1947.01Transcription factor BEE 1 OS=Arabidopsis thaliana... [more]
BH060_ARATH1.840e-1756.25Transcription factor bHLH60 OS=Arabidopsis thalian... [more]
BH066_ARATH3.837e-1549.44Transcription factor bHLH66 OS=Arabidopsis thalian... [more]
BH082_ARATH1.612e-1364.06Transcription factor bHLH82 OS=Arabidopsis thalian... [more]
BH069_ARATH1.612e-1365.08Transcription factor bHLH69 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank description6e9 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Blonde cadenera cultivar Citrus sinensis cDNA clone Cl0006e9, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358372 ID=EG358372; Name=EG358372; organism=Citrus sinensis; type=EST; length=388bp
ACTGTGACGACTACCGCTACTACTACTCGTATGGACAAGAAAAGGAAGAA
CAGAACTAATGCTTCCTCTTCTTTCAATTCTGCTCAGTCAAAGGATCCAA
GAGAAGTGAAAAGCAAGAAGCAAAAGAAAGGCAATGTTAATGATGCCAAG
AAAGAAGAAAAGGAAAATAGTCCTAAAGCTGATAGTGAGAAGAAAGTTGC
TAAAGAACCTCCAAAAGATTACATTCATGTTAGAGCAAGGAGGGGTCAAG
CAACTGACAGCCACAGCTTAGCAGAAAGGGTAAGAAGAGAGAAAATTAGT
GAGAGGATGAAAATTTTGCAAAAGCTTGTTCCTGGCTGTGACAAGGTAAC
TGGTAAGGCCTTCATGTTGGATGAAATTATCAACTATG
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