EG358370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EG358370 vs. ExPASy Swiss-Prot
Match: STAD_ELAGV (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Elaeis guineensis var. tenera PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 1.721e-23 Identity = 55/95 (57.89%), Postives = 65/95 (68.42%), Query Frame = 1 Query: 22 YDGHDPRLFAHFAAVAQRLGVYTAHDYADILEFLIGRWXXXXXXXXXXXXRRAQEFVCGLAPRIRRLQELADQRAKKLKPPLVKFSWIFNRELSL 306 YDG D LF HF+AVAQRLGV TA DYADILEFLI RW +RAQ+FVC LAPRIRR++E A +RAK + P + SWI+ RE+ L Sbjct: 301 YDGQDDNLFEHFSAVAQRLGVDTAKDYADILEFLINRWKVGELTGFSGEGKRAQDFVCTLAPRIRRIEERAQERAK--QAPRIPCSWIYGREVQL 393
BLAST of EG358370 vs. ExPASy Swiss-Prot
Match: STAD_CUCSA (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.721e-23 Identity = 53/95 (55.79%), Postives = 66/95 (69.47%), Query Frame = 1 Query: 22 YDGHDPRLFAHFAAVAQRLGVYTAHDYADILEFLIGRWXXXXXXXXXXXXRRAQEFVCGLAPRIRRLQELADQRAKKLKPPLVKFSWIFNRELSL 306 YDG D LF HF+AVAQRLGVYTA DYADILEFL+GRW ++AQ++VC L RIR+L+E A RAK + P + FSWIF+R++ L Sbjct: 304 YDGRDDNLFHHFSAVAQRLGVYTAKDYADILEFLVGRWKVESLTGLSGEGQKAQDYVCALPARIRKLEERAQGRAK--EGPTIPFSWIFDRQVKL 396
BLAST of EG358370 vs. ExPASy Swiss-Prot
Match: STAD_SOYBN (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Glycine max GN=ACPD PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.115e-22 Identity = 51/92 (55.43%), Postives = 64/92 (69.57%), Query Frame = 1 Query: 22 YDGHDPRLFAHFAAVAQRLGVYTAHDYADILEFLIGRWXXXXXXXXXXXXRRAQEFVCGLAPRIRRLQELADQRAKKLKPPLVKFSWIFNRE 297 YDG D LF ++++VAQR+GVYTA DYADILEFL+GRW R+AQE++CGL PRIRRL+E A R K + +KFSWI +RE Sbjct: 299 YDGRDDNLFDNYSSVAQRIGVYTAKDYADILEFLVGRWKVEQLTGLSGEGRKAQEYICGLPPRIRRLEERAQARVK--ESSTLKFSWIHDRE 388
BLAST of EG358370 vs. ExPASy Swiss-Prot
Match: STAD_SIMCH (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Simmondsia chinensis PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.441e-22 Identity = 51/95 (53.68%), Postives = 64/95 (67.37%), Query Frame = 1 Query: 22 YDGHDPRLFAHFAAVAQRLGVYTAHDYADILEFLIGRWXXXXXXXXXXXXRRAQEFVCGLAPRIRRLQELADQRAKKLKPPLVKFSWIFNRELSL 306 YDG D LF +++AVAQ++GVYTA DYADILE L+ RW +AQ+FVCGLAPRIR+L E A +K + LV FSWIFN+EL + Sbjct: 306 YDGKDDNLFENYSAVAQQIGVYTAKDYADILEHLVNRWKVENLMGLSGEGHKAQDFVCGLAPRIRKLGERAQSLSKPVS--LVPFSWIFNKELKV 398
BLAST of EG358370 vs. ExPASy Swiss-Prot
Match: STAD_GOSHI (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.037e-20 Identity = 47/95 (49.47%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 22 YDGHDPRLFAHFAAVAQRLGVYTAHDYADILEFLIGRWXXXXXXXXXXXXRRAQEFVCGLAPRIRRLQELADQRAKKLKPPLVKFSWIFNRELSL 306 YDG D LF H++AVAQR+GVYTA DY DI+E L+ RW R+AQ+++C L RIRRL+E A ++A+ P+ FSWIF+RE+ L Sbjct: 304 YDGRDYNLFDHYSAVAQRIGVYTAKDYVDIVEHLVDRWKVKELAGLSAEGRKAQDYLCSLPSRIRRLEERAQEKAQG-STPVSPFSWIFDREVKL 397
BLAST of EG358370 vs. ExPASy Swiss-Prot
Match: STAD_CORSA (Omega-12 acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Coriandrum sativum PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.180e-20 Identity = 46/93 (49.46%), Postives = 61/93 (65.59%), Query Frame = 1 Query: 22 YDGHDPRLFAHFAAVAQRLGVYTAHDYADILEFLIGRWXXXXXXXXXXXXRRAQEFVCGLAPRIRRLQELADQRAKKLKPPLVKFSWIFNREL 300 YDG D LF HF AVAQ++GVY+A DY DI++FL+ +W R+AQE+VC LA +IRR++E + KK P V FSWIFNR++ Sbjct: 292 YDGSDDMLFKHFTAVAQQIGVYSAWDYCDIIDFLVDKWNVAKMTGLSGEGRKAQEYVCSLAAKIRRVEEKVQGKEKKAVLP-VAFSWIFNRQI 383
BLAST of EG358370 vs. ExPASy Swiss-Prot
Match: STAD_LINUS (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Linum usitatissimum PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.571e-19 Identity = 51/95 (53.68%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 22 YDGHDPRLFAHFAAVAQRLGVYTAHDYADILEFLIGRWXXXXXXXXXXXXRRAQEFVCGLAPRIRRLQELADQRAKKLKPPLVKFSWIFNRELSL 306 YDG D LF ++++VAQR+G TA DYADILEFL+GRW +AQ+FVCGL RIR+L+E A RAK+ V FSWIF+REL L Sbjct: 304 YDGEDDNLFDNYSSVAQRIGD-TAKDYADILEFLVGRWKVDAFTGLSGEGNKAQDFVCGLPARIRKLEERAAGRAKQTSKS-VPFSWIFSRELVL 396 The following BLAST results are available for this feature:
BLAST of EG358370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >EG358370 ID=EG358370; Name=EG358370; organism=Citrus sinensis; type=EST; length=411bpback to top |