EG358357

Overview
NameEG358357
Unique NameEG358357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length542
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EG358357_ssr109 microsatellite EG358357_ssr109:109..120. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7453 contig Csv1_Contig7453:165..706. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358357 vs. ExPASy Swiss-Prot
Match: DMPM_STRAD (O-demethylpuromycin-O-methyltransferase OS=Streptomyces alboniger GN=dmpM PE=4 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.826e-14
Identity = 52/167 (31.14%), Postives = 82/167 (49.10%), Query Frame = 3
Query:   69 FEYAMKDARRRNLFNQSMSNHTALVMKKIL-EIYKGFEEINQLVDVAGGLGANLSLLVSKYPQIRGINFDSPHVIKDAPSYPGVEHVG-------GDMFVEVPKGEAIF-LKLILHDWSDDQCVKILKNCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQM 542
            F Y  +       F  SM   T  +   +  E    F     +VD+ G  G+ L+ ++S +P + G+ FDSP   +DA +      VG       GD F  VP G  ++ LK ILHDWSD +   IL+    A+P   +++VV+ L+P+++++     L YL D+ M
Sbjct:  166 FSYLSERPELSGTFTSSMREATRTMSTALAKEEEYDFSSYGTVVDIGGADGSLLAAVLSAHPGVEGVVFDSPEGARDAAATLDAAGVGERGRVETGDFFTRVPGGGDLYVLKSILHDWSDARSADILRTVRAAMPAHARLLVVEVLLPDTVDSS-AHPLGYLSDLYM 331          
BLAST of EG358357 vs. ExPASy Swiss-Prot
Match: OMT9_DICDI (O-methyltransferase 9 OS=Dictyostelium discoideum GN=omt9 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.296e-14
Identity = 46/136 (33.82%), Postives = 73/136 (53.68%), Query Frame = 3
Query:   99 RNLFNQSMSNHTALVMKKILEIYKG--FEEINQLVDVAGGLGANLSLLVSKYPQIR-GINFDSPHVIKDAP-----SYPGVEHVGGDMFVEVPKGEAIFLKLILHDWSDDQCVKILKNCYDALPEFGKVIVVDSLI 482
            ++LFNQ+M  +T   +  I +  KG  F + + +VD+ G  G  +  L+  YP I+ GINFD   VI  +      S+P + H+ G+ F  VP+ +   +K ILHDW    CVKILK    ++    K+ + + +I
Sbjct:  164 KDLFNQTMKVYTEAAISNITQS-KGIDFSQYDTVVDIGGNHGLLIGNLLEIYPTIKHGINFDLDVVINSSDQTLRYSHPRLTHIPGNFFESVPESDCYIMKFILHDWPTQDCVKILKTISKSMKPNAKIHLFEIII 298          
BLAST of EG358357 vs. ExPASy Swiss-Prot
Match: HIOM_MACMU (Hydroxyindole O-methyltransferase OS=Macaca mulatta GN=ASMT PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.516e-11
Identity = 50/186 (26.88%), Postives = 89/186 (47.85%), Query Frame = 3
Query:    3 HLKDCLLEGTLPFMKAHNT--KNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIY--KGFEEINQLVDVAGGLGANLSLLVSKYPQIRGINFDSPHVIKDAP---SYPGVEHVG---GDMFVE-VPKGEAIFLKLILHDWSDDQCVKILKNCYDALPEFGKVIVVDSLIPESLETDILSRLVYL 527
            HL D + EG   +++      ++ F+   +    R  F Q++    ++  + +L  +   GF     + D+ GG GA     +S YP  +   FD P V++ A    S+P  E +    GD F + +P+ +   L  ILHDW+D +C  +L+  Y      G ++V++SL+ E     +L++L  L
Sbjct:  119 HLADAVREGKNQYLQTFGVPAEDLFKAIYRSEGERLQFMQALQEVWSVNGRSVLTAFDLSGFP---LMCDLGGGPGALAKECLSLYPGCKVTVFDVPEVVRTAKQHFSFPEEEEIHLQEGDFFKDPLPEADLYILARILHDWADGKCSHLLERVYHTCKPGGGILVIESLLDEDRRGPLLTQLYSL 301          
The following BLAST results are available for this feature:
BLAST of EG358357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
DMPM_STRAD2.826e-1431.14O-demethylpuromycin-O-methyltransferase OS=Strepto... [more]
OMT9_DICDI6.296e-1433.82O-methyltransferase 9 OS=Dictyostelium discoideum ... [more]
HIOM_MACMU6.516e-1126.88Hydroxyindole O-methyltransferase OS=Macaca mulatt... [more]

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Properties
Property NameValue
Genbank description6c3 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Blonde cadenera cultivar Citrus sinensis cDNA clone Cl0006c3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358357 ID=EG358357; Name=EG358357; organism=Citrus sinensis; type=EST; length=542bp
ACCACTTGAAAGATTGTTTATTGGAAGGGACCCTACCTTTTATGAAGGCA
CATAATACAAAAAATCCATTTGAGTATGCTATGAAAGATGCTAGAAGACG
GAACCTCTTCAATCAATCAATGAGCAATCATACGGCTTTAGTTATGAAGA
AAATTCTTGAAATCTACAAAGGATTTGAAGAGATAAACCAATTGGTAGAT
GTTGCCGGTGGTTTAGGTGCTAATCTCAGCTTACTAGTTTCTAAATACCC
ACAAATTCGGGGTATTAACTTTGACTCGCCTCATGTCATTAAAGATGCAC
CTTCTTATCCAGGTGTGGAGCATGTTGGAGGAGATATGTTTGTTGAAGTG
CCTAAAGGAGAAGCTATTTTTCTGAAGTTGATACTTCATGACTGGAGTGA
TGACCAATGTGTGAAGATACTGAAGAATTGCTACGATGCTCTTCCAGAAT
TCGGGAAGGTCATTGTGGTAGACTCTTTAATACCAGAGTCCCTTGAGACT
GATATTTTAAGCAGGCTTGTTTATCTGCTTGACATACAAATG
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