CX672192

Overview
NameCX672192
Unique NameCX672192
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672192 vs. ExPASy Swiss-Prot
Match: 1433B_SHEEP (14-3-3 protein beta/alpha (Fragments) OS=Ovis aries GN=YWHAB PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.578e-33
Identity = 74/117 (63.25%), Postives = 86/117 (73.50%), Query Frame = -2
Query:  370 KMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQIDE 720
            KMKGDY+RYL+E   GD ++    N+  +Y+ A +I+  ++ PTHPIRLGLALNFSVFYYEILNS             EAIAELDTL EESYKDSTLIMQLLRDNLTLWTS+ Q DE
Sbjct:   85 KMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNS------------PEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDE 189          
BLAST of CX672192 vs. ExPASy Swiss-Prot
Match: 14338_ORYSJ (Putative 14-3-3-like protein GF14-H OS=Oryza sativa subsp. japonica GN=GF14H PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.606e-27
Identity = 62/139 (44.60%), Postives = 88/139 (63.31%), Query Frame = -2
Query:  382 CGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDM 798
            C  +L ++  H +P A +GE+ VF+ KMKGDYYRYLAEF  G E+KAA + ++++Y+A     L  L                   EI+NS E+A  +AKQA +EA AE+++ G E YKDS L+MQLL++NL LWTS++
Sbjct:   95 CNEVLSIIAIHCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQAWPCAQLFSL------------------LEIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKENLALWTSEL 215          
BLAST of CX672192 vs. ExPASy Swiss-Prot
Match: 1433X_MAIZE (14-3-3-like protein (Fragment) OS=Zea mays PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.983e-17
Identity = 43/55 (78.18%), Postives = 49/55 (89.09%), Query Frame = -2
Query:  373 ILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQID 537
            ILNS ++AC +AKQAF+EAI+ELD+LGEESYKDSTLIMQLL DNLTLWTSD   D
Sbjct:    1 ILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLXDNLTLWTSDTNED 55          
The following BLAST results are available for this feature:
BLAST of CX672192 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433B_SHEEP2.578e-3363.2514-3-3 protein beta/alpha (Fragments) OS=Ovis arie... [more]
14338_ORYSJ3.606e-2744.60Putative 14-3-3-like protein GF14-H OS=Oryza sativ... [more]
1433X_MAIZE1.983e-1778.1814-3-3-like protein (Fragment) OS=Zea mays PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15E07_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15E07-J13-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672192 ID=CX672192; Name=CX672192; organism=Citrus sinensis; type=EST; length=799bp
TTTTTTTTTTTTTTTTTAACTTCTAAGTTTGTGTATTATACTTGATTAAA
GGGATTAAGAGTCCATTTAATCTTTGAGGATTTGTAATAGGTTGCCAGAA
TTGGTATGTAGTTCTATATCCACTGGCTAATAAAATTGCTGCAGGCTGAA
GAATTTCAAAGCCATATAGAAGCTACATACTTAGCACATCATATACTGAC
CTACTCGTCCCACTTGCATAAAGTTTGTCAGATATTGTAACGAAATCCAA
AAGGAAGACAACACAAGTTTACAACCGATACATAGTCAACTAAAATCACA
CTTGCTTTACAATTCATGACATTCAAAAGCCCACCTCCCCAGAGGAGCAA
ACGATCCATACCCTTATGCCTCATCTATCTGCATATCTGAGGTCCACAGA
GTGAGGTTGTCTCTTAGCAATTGCATGATAAGAGTGCTATCCTTGTAGGA
TTCTTCACCCAAAGTGTCCAGCTCAGCAATGGCCTCCTCAAAGGCCTGTT
TGGCCATGGTACAAGCTTTCTCTGATGAATTGAGAATCTCATAGTAAAAC
ACTGAGAAGTTGAGTGCCAGCCCCAACCTTATAGGGTGTGTTGGCGCCAG
ATCAGTCAGTGCAATATCCTGAGCCGCCTTATAAGACAACATAGTGTTTT
CAGCGGCGGCCTTCCTCTCATCACCAACTTTAAACTCCGCCAAGTAACGG
TAGTAATCTCCCTTCATCTTCAAATAGAAGACTTTGGACTCACCAGCAGT
AGCCGAAGGCACAAGGTGCGAGTCCAGCAACTTCAATATGCTCCCGCAC
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