CX672189

Overview
NameCX672189
Unique NameCX672189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672189 vs. ExPASy Swiss-Prot
Match: HTRAL_STAES (Serine protease htrA-like OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_0722/SE_0723 PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.189e-12
Identity = 55/190 (28.95%), Postives = 94/190 (49.47%), Query Frame = 1
Query:  244 EEDRVVQLFQETSPSVVSIQDLELSKNPKSTSSELMLVDGEYAKVEGTGSGFVWDMFG---HIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYG--FEDTLTTGVVSGLGREIP-----SPNGRAIRGAIQTDAAIN 783
            +E   +++ + +  SVV++++          S++  + D +       GSG V+   G   +I TN HVV           + KV+     GN     GK++G D   DLAV+K  V    +KP+ +G S+++++ +    IGNP G  F+ +++ G+VSGL R +P     + N  A+  A Q DA +N
Sbjct:  261 DETTAMKIAENSVKSVVTVEN--------DLSNDTTVSDNKNESDNEIGSGVVYKKVGDSIYIFTNAHVVGDQ-------EKQKVTY----GNDKSVTGKVIGKDKWSDLAVVKAKVADENIKPMTMGDSNNIKLAEPILVIGNPLGTDFKGSVSQGIVSGLNRHVPVDIDKNDNYDALMKAFQIDAPVN 431          
BLAST of CX672189 vs. ExPASy Swiss-Prot
Match: HTRAL_STAEQ (Serine protease htrA-like OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0611 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.189e-12
Identity = 55/190 (28.95%), Postives = 94/190 (49.47%), Query Frame = 1
Query:  244 EEDRVVQLFQETSPSVVSIQDLELSKNPKSTSSELMLVDGEYAKVEGTGSGFVWDMFG---HIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYG--FEDTLTTGVVSGLGREIP-----SPNGRAIRGAIQTDAAIN 783
            +E   +++ + +  SVV++++          S++  + D +       GSG V+   G   +I TN HVV           + KV+     GN     GK++G D   DLAV+K  V    +KP+ +G S+++++ +    IGNP G  F+ +++ G+VSGL R +P     + N  A+  A Q DA +N
Sbjct:  261 DETTAMKIAENSVKSVVTVEN--------DLSNDTTVSDNKNESDNEIGSGVVYKKVGDSIYIFTNAHVVGDQ-------EKQKVTY----GNDKSVTGKVIGKDKWSDLAVVKAKVADENIKPMTMGDSNNIKLAEPILVIGNPLGTDFKGSVSQGIVSGLNRHVPVDIDKNDNYDALMKAFQIDAPVN 431          
BLAST of CX672189 vs. ExPASy Swiss-Prot
Match: DEGS_ECOLI (Protease degS OS=Escherichia coli (strain K12) GN=degS PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.440e-12
Identity = 53/171 (30.99%), Postives = 83/171 (48.54%), Query Frame = 1
Query:  271 QETSPSVVSIQDLELSKNPKSTSSELMLVDGEYAKVEGTGSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGREIPSPNGRAIRGAIQTDAAIN 783
            +  +P+VV++ +  L+ N  +             ++   GSG + D  G+I+TN HV+       +   +  V+L D    G   E  +VG D   DLAVLK++  G  L  + +       +G    AIGNPY    T+T G++S  GR   +P GR  +  +QTDA+IN
Sbjct:   52 RRAAPAVVNVYNRGLNTNSHNQ-----------LEIRTLGSGVIMDQRGYIITNKHVI-------NDADQIIVALQD----GRVFEALLVGSDSLTDLAVLKINATG-GLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGR--QNFLQTDASIN 197          
BLAST of CX672189 vs. ExPASy Swiss-Prot
Match: DEGS_ECO57 (Protease degS OS=Escherichia coli O157:H7 GN=degS PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.440e-12
Identity = 53/171 (30.99%), Postives = 83/171 (48.54%), Query Frame = 1
Query:  271 QETSPSVVSIQDLELSKNPKSTSSELMLVDGEYAKVEGTGSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGREIPSPNGRAIRGAIQTDAAIN 783
            +  +P+VV++ +  L+ N  +             ++   GSG + D  G+I+TN HV+       +   +  V+L D    G   E  +VG D   DLAVLK++  G  L  + +       +G    AIGNPY    T+T G++S  GR   +P GR  +  +QTDA+IN
Sbjct:   52 RRAAPAVVNVYNRGLNTNSHNQ-----------LEIRTLGSGVIMDQRGYIITNKHVI-------NDADQIIVALQD----GRVFEALLVGSDSLTDLAVLKINATG-GLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGR--QNFLQTDASIN 197          
BLAST of CX672189 vs. ExPASy Swiss-Prot
Match: DEGQ_ECOLI (Protease degQ OS=Escherichia coli (strain K12) GN=degQ PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.440e-12
Identity = 57/203 (28.08%), Postives = 96/203 (47.29%), Query Frame = 1
Query:  196 SFRSAIALQQKDELQLEEDRVVQLFQETSPSVVSIQDLELSKNPKSTSSELM------LVDGEYAKVEGTGSGFVWDMF-GHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGREIPSPNGRAIRGAIQTDAAIN 783
            SF++  ++  +   Q     +  + ++  P+VVS++    +   +    E        L D      EG GSG + +   G+++TN HV+ +           K+S+    G  F  + K++G D   D+A+L++     +L  + +  S  LRVG    A+GNP+G   T T+G+VS LGR     N   +   IQTDA+IN
Sbjct:   22 SFQAVASIPGQVADQAPLPSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQ---------KISIQLNDGREF--DAKLIGSDDQSDIALLQIQNPS-KLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRS--GLNLEGLENFIQTDASIN 210          
BLAST of CX672189 vs. ExPASy Swiss-Prot
Match: DEGP_BUCBP (Probable serine protease do-like OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=degP PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.212e-11
Identity = 50/138 (36.23%), Postives = 72/138 (52.17%), Query Frame = 1
Query:  373 KVEGTGSGFVWDMF-GHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGREIPSPNGRAIRGAIQTDAAIN 783
            K    GSG + D   G+IVTN HVV +        ++ +V L     NG   E  ++G D  +D+A++K+  +   L  + +  S  L+VG    AIGNPYG  +T+T+G++S L R     N       IQTDAAIN
Sbjct:   97 KFHALGSGVILDSKNGYIVTNSHVVDRA-------NKIQVQL----SNGCKHEAVVIGKDARFDIAIIKLK-KVKNLHEIKMSNSDILKVGDYVIAIGNPYGLGETVTSGIISALHRS--GLNIENYENFIQTDAAIN 220          
BLAST of CX672189 vs. ExPASy Swiss-Prot
Match: DEGP_BARHE (Probable periplasmic serine protease DO-like OS=Bartonella henselae GN=degP PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.212e-11
Identity = 51/132 (38.64%), Postives = 65/132 (49.24%), Query Frame = 1
Query:  388 GSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGREIPSPNGRAIRGAIQTDAAIN 783
            GSGF     G+IVTN HV++              S      +G     K++G DP  DLAVLKV+ E  +   V  G    LRVG    AIGNP+G   T+T G+VS  GR+I +         IQ DAA+N
Sbjct:  127 GSGFFISSDGYIVTNNHVISD-----------GTSYAVVLDDGTELNAKLIGTDPRTDLAVLKVN-EKRKFSYVDFGDDSKLRVGDWVVAIGNPFGLGGTVTAGIVSARGRDIGT---GVYDDFIQIDAAVN 243          
BLAST of CX672189 vs. ExPASy Swiss-Prot
Match: HTRA1_MOUSE (Serine protease HTRA1 OS=Mus musculus GN=Htra1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11
Identity = 52/136 (38.24%), Postives = 76/136 (55.88%), Query Frame = 1
Query:  385 TGSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGL---GREIPSPNGRAIRGAIQTDAAIN 783
            +GSGF+    G IVTN HVV       +  +R KV L     NG   E  +   D   D+A++K+D +G +L  ++LG S +LR G+   AIG+P+  ++T+TTG+VS     G+E+   N  +    IQTDA IN
Sbjct:  203 SGSGFIVSEDGLIVTNAHVV-------TNKNRVKVEL----KNGATYEAIIKDVDEKADIALIKIDHQG-KLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKELGLRN--SDMDYIQTDAIIN 324          
BLAST of CX672189 vs. ExPASy Swiss-Prot
Match: DEGP_BUCAI (Probable serine protease do-like OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=degP PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11
Identity = 50/143 (34.97%), Postives = 73/143 (51.05%), Query Frame = 1
Query:  358 DGEYAKVEGTGSGFVWDMF-GHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGREIPSPNGRAIRGAIQTDAAIN 783
            D +  K    GSG + +   G+ VTN HVV          ++ +V L D    G   E +++G D   D+A++++      L  + +  S +LRVG    AIGNPYG  +T+T+G++S LGR     N       IQTDAAIN
Sbjct:  106 DDKKEKFRALGSGVIINADKGYAVTNNHVV-------ENANKIQVQLSD----GRRYEARVIGKDSRSDIALIQLK-NANNLSEIKIADSDNLRVGDYTVAIGNPYGLGETVTSGIISALGRS--GLNIEHYENFIQTDAAIN 234          
BLAST of CX672189 vs. ExPASy Swiss-Prot
Match: HTRA_LACLA (Serine protease do-like htrA OS=Lactococcus lactis subsp. lactis GN=htrA PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11
Identity = 63/194 (32.47%), Postives = 92/194 (47.42%), Query Frame = 1
Query:  256 VVQLFQETSPSVVSIQDLELSKNPKSTSSELMLVD-GEYAKVEGT-----GSGFVWDMFG---HIVTNYHVVA---KLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPV-VLGTSHDLRVGQSCFAIGNPYG--FEDTLTTGVVSGLGREI--PSPNGRAIR-GAIQTDAAIN 783
            V    ++ S SVVS+ + +   +  S  S +   + G  +  +G      GSG ++   G   ++VTNYHV+A    L    SG  + K S+              VGYD   DLAVLK+  E   +K V     S  L +G+   A+G+P G  F +T T G++S   R++     NG+     AIQTDAAIN
Sbjct:   58 VTSAIKKVSNSVVSVMNYQKDNSQSSDFSSIFGGNSGSSSSTDGLQLSSEGSGVIYKKSGGDAYVVTNYHVIAGNSSLDVLLSGGQKVKASV--------------VGYDEYTDLAVLKISSE--HVKDVATFADSSKLTIGEPAIAVGSPLGSQFANTATEGILSATSRQVTLTQENGQTTNINAIQTDAAIN 235          
The following BLAST results are available for this feature:
BLAST of CX672189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
HTRAL_STAES3.189e-1228.95Serine protease htrA-like OS=Staphylococcus epider... [more]
HTRAL_STAEQ3.189e-1228.95Serine protease htrA-like OS=Staphylococcus epider... [more]
DEGS_ECOLI5.440e-1230.99Protease degS OS=Escherichia coli (strain K12) GN=... [more]
DEGS_ECO575.440e-1230.99Protease degS OS=Escherichia coli O157:H7 GN=degS ... [more]
DEGQ_ECOLI5.440e-1228.08Protease degQ OS=Escherichia coli (strain K12) GN=... [more]
DEGP_BUCBP1.212e-1136.23Probable serine protease do-like OS=Buchnera aphid... [more]
DEGP_BARHE1.212e-1138.64Probable periplasmic serine protease DO-like OS=Ba... [more]
HTRA1_MOUSE3.526e-1138.24Serine protease HTRA1 OS=Mus musculus GN=Htra1 PE=... [more]
DEGP_BUCAI3.526e-1134.97Probable serine protease do-like OS=Buchnera aphid... [more]
HTRA_LACLA4.606e-1132.47Serine protease do-like htrA OS=Lactococcus lactis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15E05_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15E05-J9-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672189 ID=CX672189; Name=CX672189; organism=Citrus sinensis; type=EST; length=786bp
ATGTTAAGCCTCCACTAAACTGAAATGAAGGCGCTACTGAGTTCGCTTCA
AACACTTCCAGTTTCAACTGCTTCAACTGATGTAAATAAGACTAAGAGCC
TTGATATTACAAGAAGAAGATCAATAGGTTTTGGTTCAAGCGCTATACTG
TCTTCTTTACTAGTCAATTTCTGCAGTCCAAGCTCAACATTGCCTTCATT
CCGCTCTGCTATTGCCCTCCAACAGAAAGACGAACTTCAGTTAGAAGAAG
ATAGAGTTGTACAACTCTTCCAGGAAACTTCACCATCGGTTGTTTCTATT
CAAGACCTTGAATTGTCTAAAAACCCAAAGAGCACTTCTAGTGAATTGAT
GCTTGTTGATGGTGAATATGCAAAAGTTGAAGGCACGGGTTCTGGCTTTG
TTTGGGATATGTTTGGTCACATCGTCACTAATTATCATGTTGTAGCCAAA
TTGGCCACAGATACAAGTGGGTTGCATCGTTGTAAGGTTTCTCTATTTGA
TGCCAAAGGCAATGGCTTTTATAGGGAGGGCAAGATGGTTGGTTATGATC
CAGCTTATGATTTAGCTGTTCTGAAGGTAGATGTTGAAGGATATGAATTG
AAGCCTGTCGTTCTGGGTACATCGCATGATTTACGTGTAGGTCAGAGTTG
CTTTGCAATTGGGAATCCTTATGGATTTGAAGACACACTTACGACAGGGG
TTGTCAGTGGACTTGGCAGGGAGATACCATCACCAAATGGAAGAGCCATT
CGAGGAGCTATCCAAACAGATGCTGCTATTAATTCA
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