CX672188

Overview
NameCX672188
Unique NameCX672188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672188 vs. ExPASy Swiss-Prot
Match: HTRA2_DROSE (Serine protease HTRA2, mitochondrial OS=Drosophila sechellia GN=HtrA2 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.278e-16
Identity = 70/178 (39.33%), Postives = 91/178 (51.12%), Query Frame = -3
Query:  279 GSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGR---EIPSPNGRAIRGAIQTDAAINSGNSGGPLINSFGHVIGVNTATFTRKGTGLSSGVNFAIPIDTV 803
            GSGF+ +  G I+TN HVV             +V L D  G  F     +   D   DLA L++ V    L  + LG S  LR G+   A+G+P    +T+T GV+S   R   E+   N R I   +QTDAAI  GNSGGPL+N  G  IGVN+   T       +G++FAIPID V
Sbjct:  141 GSGFIIEQNGLILTNAHVVINKPHTM-----VQVRLSD--GRTF--PATIEDVDQTSDLATLRIQVNN--LSVMRLGKSSTLRSGEWVVALGSPLALSNTVTAGVISSTQRASQELGLRN-RDIN-YLQTDAAITFGNSGGPLVNLDGEAIGVNSMKVT-------AGISFAIPIDYV 298          
BLAST of CX672188 vs. ExPASy Swiss-Prot
Match: HTRA2_DROME (Serine protease HTRA2, mitochondrial OS=Drosophila melanogaster GN=HtrA2 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.278e-16
Identity = 70/178 (39.33%), Postives = 91/178 (51.12%), Query Frame = -3
Query:  279 GSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGR---EIPSPNGRAIRGAIQTDAAINSGNSGGPLINSFGHVIGVNTATFTRKGTGLSSGVNFAIPIDTV 803
            GSGF+ +  G I+TN HVV             +V L D  G  F     +   D   DLA L++ V    L  + LG S  LR G+   A+G+P    +T+T GV+S   R   E+   N R I   +QTDAAI  GNSGGPL+N  G  IGVN+   T       +G++FAIPID V
Sbjct:  141 GSGFIIEQNGLILTNAHVVINKPHTM-----VQVRLSD--GRTF--PATIEDVDQTSDLATLRIQVNN--LSVMRLGKSSTLRSGEWVVALGSPLALSNTVTAGVISSTQRASQELGLRN-RDIN-YLQTDAAITFGNSGGPLVNLDGEAIGVNSMKVT-------AGISFAIPIDYV 298          
BLAST of CX672188 vs. ExPASy Swiss-Prot
Match: HTRA2_DROER (Serine protease HTRA2, mitochondrial OS=Drosophila erecta GN=HtrA2 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.278e-16
Identity = 70/178 (39.33%), Postives = 91/178 (51.12%), Query Frame = -3
Query:  279 GSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGR---EIPSPNGRAIRGAIQTDAAINSGNSGGPLINSFGHVIGVNTATFTRKGTGLSSGVNFAIPIDTV 803
            GSGF+ +  G I+TN HVV             +V L D  G  F     +   D   DLA L++ V    L  + LG S  LR G+   A+G+P    +T+T GV+S   R   E+   N R I   +QTDAAI  GNSGGPL+N  G  IGVN+   T       +G++FAIPID V
Sbjct:  141 GSGFIIEQNGLILTNAHVVINKPHTM-----VQVRLSD--GRTF--PATIEDVDQTSDLATLRIQVNN--LSVMRLGKSSTLRSGEWVVALGSPLALSNTVTAGVISSTQRASQELGLRN-RDIN-YLQTDAAITFGNSGGPLVNLDGEAIGVNSMKVT-------AGISFAIPIDYV 298          
BLAST of CX672188 vs. ExPASy Swiss-Prot
Match: HTRA2_DROAN (Serine protease HTRA2, mitochondrial OS=Drosophila ananassae GN=HtrA2 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.278e-16
Identity = 70/178 (39.33%), Postives = 91/178 (51.12%), Query Frame = -3
Query:  279 GSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGR---EIPSPNGRAIRGAIQTDAAINSGNSGGPLINSFGHVIGVNTATFTRKGTGLSSGVNFAIPIDTV 803
            GSGF+ +  G I+TN HVV             +V L D  G  F     +   D   DLA L++ V    L  + LG S  LR G+   A+G+P    +T+T GV+S   R   E+   N R I   +QTDAAI  GNSGGPL+N  G  IGVN+   T       +G++FAIPID V
Sbjct:  145 GSGFIIEQNGLILTNAHVVINKPHTM-----VQVRLSD--GRTF--PATIEDVDQTSDLATLRIQVSN--LSVMRLGKSSTLRSGEWVVALGSPLALSNTVTAGVISSTQRASQELGLRN-RDIN-YLQTDAAITFGNSGGPLVNLDGEAIGVNSMKVT-------AGISFAIPIDYV 302          
BLAST of CX672188 vs. ExPASy Swiss-Prot
Match: HTRAL_STAS1 (Serine protease htrA-like OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1763 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.118e-15
Identity = 61/192 (31.77%), Postives = 95/192 (49.48%), Query Frame = -3
Query:  285 EYAKVEGTGSGFVWDMFGH---IVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVE-GYELKPVVLGTSHDLRVGQSCFAIGNPYG--FEDTLTTGVVSGLGREIPSPNGR-----AIRGAIQTDAAINSGNSGGPLINSFGHVIGVNTATFTRKGTGLSSGVNFAIPID 827
            E  K    GSG V+   G    I+TN HVV             K++     GN     GK++G D   D+AV+K  ++ G ++K + +G S  L +G+    +GNP G  F+ +++ G+VSGL R +P    +      +  A Q DA +N GNSGG +I+  G +IG+ +            G+ FAIP++
Sbjct:  304 EAGKENELGSGVVYKKVGDSIFIMTNAHVVGDKKEQ-------KITY----GNNDTSIGKVIGTDKFSDIAVVKTKIKSGSDVKSIKMGDSSTLVLGEPIIVVGNPLGVDFKGSVSEGIVSGLNRHVPVDIDKDNQYDVLMSAFQMDAPVNPGNSGGGVIDKNGKLIGIASLKIDMDHV---EGIAFAIPVN 481          
The following BLAST results are available for this feature:
BLAST of CX672188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
HTRA2_DROSE7.278e-1639.33Serine protease HTRA2, mitochondrial OS=Drosophila... [more]
HTRA2_DROME7.278e-1639.33Serine protease HTRA2, mitochondrial OS=Drosophila... [more]
HTRA2_DROER7.278e-1639.33Serine protease HTRA2, mitochondrial OS=Drosophila... [more]
HTRA2_DROAN7.278e-1639.33Serine protease HTRA2, mitochondrial OS=Drosophila... [more]
HTRAL_STAS12.118e-1531.77Serine protease htrA-like OS=Staphylococcus saprop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15E05_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15E05-J9-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672188 ID=CX672188; Name=CX672188; organism=Citrus sinensis; type=EST; length=871bp
TTTTTTAATGCATTAATGATCCCTTTATTGCAGGAGCAAATCCTGGGAGA
CTGCTGACAAGGATGCAGAGTCTTGATGCTAGCACTAAATATTGTCATAA
GTGGTCAATTTAATTATCTTGGAAACAAGAAGGAAAAGTATACAGTGAGA
TTGCACAATTTACATAATTTGAGTTTCAGGGCTAAATCGTACATAGCAAA
ATTACAGAAAAGATACTATTATCAAAACCTGTTACTATAGGGTGTTCCAT
ACACAATAAGGTAAGGCACGGTTCGCACAACAGTGTCAATTGGTATGGCA
AAATTCACACCGGAGGATAATCCTGTCCCTTTGCGGGTAAAAGTTGCTGT
GTTAACTCCTATAACATGGCCAAATGAATTGATTAGTGGCCCACCCGAAT
TCCCTGAATTAATAGCAGCATCTGTTTGGATAGCTCCTCGAATGGCTCTT
CCATTTGGTGATGGTATCTCCCTGCCAAGTCCACTGACAACCCCTGTCGT
AAGTGTGTCTTCAAATCCATAAGGATTCCCAATTGCAAAGCAACTCTGAC
CTACACGTAAATCATGCGATGTACCCAGAACGACAGGCTTCAATTCATAT
CCTTCAACATCTACCTTCAGAACAGCTAAATCATAAGCTGGATCATAACC
AACCATCTTGCCCTCCCTATAAAAGCCATTGCCTTTGGCATCAAATAGAG
AAACCTTACAACGATGCAACCCACTTGTATCTGTGGCCAATTTGGCTACA
ACATGATAATTAGTGACGATGTGACCAAACATATCCCAAACAAAGCCAGA
ACCCGTGCCTTCAACTTTTGCATATTCACCATCAACAAGCATCAATTCAC
TAGAAGTGCTCTTTGGGTTTT
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