EG358340

Overview
NameEG358340
Unique NameEG358340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length483
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358340 vs. ExPASy Swiss-Prot
Match: CYB5_ORYSJ (Cytochrome b5 OS=Oryza sativa subsp. japonica GN=Os05g0108800 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.981e-12
Identity = 41/119 (34.45%), Postives = 64/119 (53.78%), Query Frame = 2
Query:    5 VVAAEVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKK------EMEAFVVKDNGVPKYAALLEFFVPLLVAGSYFAYR 343
            ++  +V NV++FLE+HPGG++VL+ + GKDAT  FE++GHS  A  ++  Y VG +      DT T    +   P K+      +   F++K         +L+F VPL + G   A R
Sbjct:   26 IIGGKVYNVSKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSTTARAMMDEYYVGDI------DTSTIPARTKYVPPKQPHYNQDKTPEFIIK---------ILQFLVPLAILGLAVAIR 129          
BLAST of EG358340 vs. ExPASy Swiss-Prot
Match: CYB5B_RAT (Cytochrome b5 type B OS=Rattus norvegicus GN=Cyb5b PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.981e-12
Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 2
Query:    5 VVAAEVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLE----DTETSNNASFQ 223
            V+   V ++TRFL EHPGGEEVL+E AG DAT+ FE++GHS  A E+L  Y +G +    L+    D + S N S Q
Sbjct:   40 VIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIGDVHPNDLKPKDGDKDPSKNNSCQ 116          
BLAST of EG358340 vs. ExPASy Swiss-Prot
Match: CYB5_RHIST (Cytochrome b5 OS=Rhizopus stolonifer PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.588e-12
Identity = 41/117 (35.04%), Postives = 61/117 (52.14%), Query Frame = 2
Query:    5 VVAAEVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKEMEAFVVKDNGVP--KYAALLEFFVPLLVAGSYFAYRYL 349
            V+  +V ++TRF+ EHPGGEEVL++  GKDAT+ FE+IGHS  A E+L  Y +G L                +  + KE    V++   +P  K  + L   +P L       Y+Y+
Sbjct:   23 VIHNKVYDITRFVVEHPGGEEVLVDEGGKDATEAFEDIGHSDEAREMLEEYLIGSLD---------------EASRTKEYNVNVIRAGELPEEKKGSSLRIILPALAIIGALVYKYV 124          
BLAST of EG358340 vs. ExPASy Swiss-Prot
Match: CYB5_DROME (Cytochrome b5 OS=Drosophila melanogaster GN=Cyt-b5 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.414e-12
Identity = 39/95 (41.05%), Postives = 59/95 (62.11%), Query Frame = 2
Query:   20 VLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEP---KKKEMEAFVVKDNGVPKYAALL 295
            + +VT FL EHPGGEEVL+E AGKDAT+ FE++GHS  A +++  Y++G     +L ++E ++ A   EP    +++ E   VK   VP    L+
Sbjct:   31 IYDVTAFLNEHPGGEEVLIEQAGKDATENFEDVGHSNDARDMMKKYKIG-----ELVESERTSVAQKSEPTWSTEQQTEESSVKSWLVPLVLCLV 120          
BLAST of EG358340 vs. ExPASy Swiss-Prot
Match: CYB5B_HUMAN (Cytochrome b5 type B OS=Homo sapiens GN=CYB5B PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 5.765e-12
Identity = 34/71 (47.89%), Postives = 46/71 (64.79%), Query Frame = 2
Query:    5 VVAAEVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNAS 217
            V+   V +VTRFL EHPGGEEVL+E AG DA++ FE++GHS  A E+L  Y +G +    L+    S + S
Sbjct:   40 VIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPSDLKPESGSKDPS 110          
BLAST of EG358340 vs. ExPASy Swiss-Prot
Match: CYB5_CUSRE (Cytochrome b5 OS=Cuscuta reflexa PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.677e-11
Identity = 37/115 (32.17%), Postives = 63/115 (54.78%), Query Frame = 2
Query:    5 VVAAEVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKEMEAFVVKDNGVPKY-AALLEFFVPLLVAGSYFAYRY 346
            V+  +V +VT+FL++HPGG +VL+ +  KDAT  FE+IGHS +A  ++    VG      ++ +      S+  PK+      +   +  P++   LL+F VPL++ G     R+
Sbjct:   24 VIGGKVYDVTKFLDDHPGGADVLLSSTAKDATDDFEDIGHSSSARAMMDEMCVG-----DIDSSTIPTKTSYTPPKQP-----LYNQDKTPQFIIKLLQFLVPLIILGVAVGIRF 128          
The following BLAST results are available for this feature:
BLAST of EG358340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
CYB5_ORYSJ1.981e-1234.45Cytochrome b5 OS=Oryza sativa subsp. japonica GN=O... [more]
CYB5B_RAT1.981e-1248.05Cytochrome b5 type B OS=Rattus norvegicus GN=Cyb5b... [more]
CYB5_RHIST2.588e-1235.04Cytochrome b5 OS=Rhizopus stolonifer PE=2 SV=1[more]
CYB5_DROME4.414e-1241.05Cytochrome b5 OS=Drosophila melanogaster GN=Cyt-b5... [more]
CYB5B_HUMAN5.765e-1247.89Cytochrome b5 type B OS=Homo sapiens GN=CYB5B PE=1... [more]
CYB5_CUSRE1.677e-1132.17Cytochrome b5 OS=Cuscuta reflexa PE=2 SV=1[more]

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Properties
Property NameValue
Genbank description2e11 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl002e11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358340 ID=EG358340; Name=EG358340; organism=Citrus sinensis; type=EST; length=483bp
TAGCGTGGTCGCGGCCGAGGTACTGAACGTTACAAGGTTCCTGGAAGAAC
ACCCAGGAGGAGAGGAAGTGCTGATGGAGGCGGCAGGGAAGGATGCAACA
AAGCAGTTTGAGGAAATTGGACACAGCAAGGCTGCTCACGAGTTGCTCTT
CAACTACCGGGTGGGTGTTCTTCAAGGTTACAAGTTAGAAGACACAGAAA
CATCCAATAATGCTTCATTCCAGGAGCCCAAAAAGAAAGAGATGGAGGCT
TTTGTCGTCAAGGATAATGGCGTGCCTAAATATGCAGCTCTTCTCGAGTT
CTTTGTGCCACTCTTGGTTGCTGGTTCCTACTTTGCTTACAGGTATCTGG
CCTGAGCCCAGAACATCCTTGACTGGATCATCCGCTTCCTCTTATATGTC
TGCTTGATGAATTGCTGCAAGTCTCGCTGTCAGTAGGCAAGGCAACGAAT
GATTTAACCATGTACCTGCCCGGGCGGCCGCTT
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