CX672130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA3_YEAST (Proteasome component C1 OS=Saccharomyces cerevisiae GN=PRE10 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.529e-11 Identity = 39/117 (33.33%), Postives = 61/117 (52.14%), Query Frame = -3 Query: 424 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSES-TREDLIKDALMAI 771 DGR L R E ++ Y++P+P+ +L Q T + RP+GV + G+D+ GAHLY PSG+Y+ Y+ A G Q+AK LE+ ++ E + + +K A I Sbjct: 84 DGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTLYNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPEGLSAREAVKQAAKII 200
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA3_ORYSJ (Proteasome subunit alpha type-3 OS=Oryza sativa subsp. japonica GN=PAG1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.529e-11 Identity = 41/113 (36.28%), Postives = 60/113 (53.10%), Query Frame = -3 Query: 436 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSEST-REDLIKDA 771 DGR + +SE +Y Y P+ V L ++A +CT W RP+G G+++ G D G LY PSG ++Y A+G QAAKT +E+ SE T RE +++ A Sbjct: 84 DGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEKL--KLSELTCREGIVEVA 194
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA5_SOYBN (Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.997e-11 Identity = 45/156 (28.85%), Postives = 76/156 (48.72%), Query Frame = -3 Query: 313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVC---TQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 771 D R L + R E N+ ++Y P+ V L D A + S RP+GV LL+AG DE G LYY PSG +++ AIGS S+ A + L+ +F + T ++ AL +++ ++ + ++ V + +H+ V+ +I Sbjct: 84 DARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQEQFN--KDLTLQEAETIALSILKQVMEEKVTPNN---VDIAKVAPTYHLYTPSEVEAVI 234
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA7_CAEEL (Proteasome subunit alpha type-7 OS=Caenorhabditis elegans GN=pas-4 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.608e-11 Identity = 42/154 (27.27%), Postives = 71/154 (46.10%), Query Frame = -3 Query: 313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 771 D RVL R EC +Y T E P+ V + +A+ Q TQ +RP+G+ +L+ G D G L+ PSG Y+EY A A G + + YLE ++ + +K + ++ + + + I + V +L E ++ L+ Sbjct: 80 DARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEENTVDEATTLKLVVKSLAQVVPPGSQNIEIAVMKKVNDELQQRVLSTEEIEALL 233
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA5_ENTHI (Proteasome subunit alpha type-5 OS=Entamoeba histolytica PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.608e-11 Identity = 47/158 (29.75%), Postives = 82/158 (51.90%), Query Frame = -3 Query: 313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWK-----RPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 771 D R L R E N+ + Y+ P+ V + ++D + + S K RP+GV LL+AG+DE G L+ PSG + E+ A A G+ ++AA++ L ++ N S + RE I AL +++ ++ + ++ V + F I+D ++ LI Sbjct: 84 DARTLIDNARLEAQNHRFMYDEPINVEVVAQAISDLSLRFGEGSRKKKVMSRPFGVALLIAGVDETGPRLFQTDPSGMFIEFYAKATGAGTEAAQSILHEKY-NKSMTLREAEIL-ALSTLKQVMEEKLNSKNVEVALVTVEKKKFEIMDTAFIENLI 239
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA4_DICDI (Proteasome subunit alpha type-4 OS=Dictyostelium discoideum GN=psmA4 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11 Identity = 42/129 (32.56%), Postives = 68/129 (52.71%), Query Frame = -3 Query: 391 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAI-GSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKS 771 D +L Y R + Y Y+ P+PV +LV Q+ D Q TQ RP+GV L AG D G LY + PSGN+ ++A +I G SQ A++ L ++ + + ++ ++ AL + +T+ + S Sbjct: 83 DANILINYARLSSQRFFYQYQEPMPVEQLVSQICDTKQGYTQYGGLRPFGVSFLYAGWDRHYGFQLYQSDPSGNFAGWKATSIGGENSQVAQSVLRSNYK--PDISLKEALQLALKVLTKTMDRSNINS 209
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_METMP (Proteasome subunit alpha OS=Methanococcus maripaludis GN=psmA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11 Identity = 47/154 (30.52%), Postives = 73/154 (47.40%), Query Frame = -3 Query: 313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-ENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 771 D RVL R E +Y + V L ++ D Q TQ RP+G+ LL+ G+D A L+ PSG EY+A AIGS A LE ++ EN + S +L AL E L+ E + +I + +G+ + + ++K++ Sbjct: 86 DARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVSEGMELALYALSKTTEELKPENIDMAI----IKDSGKLVEKISVDEIEKIV 235 The following BLAST results are available for this feature:
BLAST of CX672130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX672130 ID=CX672130; Name=CX672130; organism=Citrus sinensis; type=EST; length=773bpback to top |