CX672130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_SCHPO (Probable proteasome subunit alpha type-2 OS=Schizosaccharomyces pombe GN=SPCC1442.06 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.203e-18 Identity = 53/120 (44.17%), Postives = 73/120 (60.83%), Query Frame = -3 Query: 367 YSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV 726 Y Y P LV ++A Q TQ RP+GV LLVAG+DEKG LY PSG YF ++A AIG S AAKT+LE+R+ + E +D + A++A++ET +GE + +I +AVV Sbjct: 97 YKKIYNEYPPTKILVQEIASVMQESTQSGGVRPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYND--ELELDDAVHTAILALKETFEGELTEDNI-EIAVV 213
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_TRYBB (Proteasome subunit alpha type-2 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.877e-18 Identity = 56/154 (36.36%), Postives = 81/154 (52.60%), Query Frame = -3 Query: 310 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLID 771 D RVL R C Y TY P+P+ +LV Q++ Q TQ RP+G LLVAG D +G HLY PSG ++ ++A +IG S A+T+LE+R+ N E ED + AL+ ++E G + VV F +L E ++ +D Sbjct: 80 DCRVLVDAARRACQRYRLTYHEPMPISQLVRQISFLFQEFTQSGGVRPFGCSLLVAGADSRGNHLYQLDPSGTFWTWKATSIGKGSPDARTFLEKRYTN--EMEIEDAVHTALLTLKEGFDGRMTAENTQVGRVVEG--RFELLTVEQLKDYLD 229
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSJ (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.093e-17 Identity = 51/157 (32.48%), Postives = 85/157 (54.14%), Query Frame = -3 Query: 301 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 771 D RVL R R + Y Y+ +PV +LV + A Q TQ RP+GV LL+AG D+ G LY PSG+YF ++A A+G AKT+LE+R+ E +D I A++ ++E +G+ ++I + ++ + F +L ++ ++ + Sbjct: 82 DFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDME--LDDAIHTAILTLKEGYEGQISANNI-EIGIIRSDREFKVLSPAEIKDFLEEVE 235
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSI (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica GN=PAB1 PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.093e-17 Identity = 51/157 (32.48%), Postives = 85/157 (54.14%), Query Frame = -3 Query: 301 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 771 D RVL R R + Y Y+ +PV +LV + A Q TQ RP+GV LL+AG D+ G LY PSG+YF ++A A+G AKT+LE+R+ E +D I A++ ++E +G+ ++I + ++ + F +L ++ ++ + Sbjct: 82 DFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDME--LDDAIHTAILTLKEGYEGQISANNI-EIGIIRSDREFKVLSPAEIKDFLEEVE 235
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_CARAU (Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.865e-17 Identity = 54/149 (36.24%), Postives = 79/149 (53.02%), Query Frame = -3 Query: 337 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQG----ETLKSSICTVAVVGAGEPFHILD 771 D RVL R R Y Y+ P+P G+LV ++A Q TQ RP+GV LL+AG DE +L+ + PSG YF ++A A+G KT+LE+R+ E ED I A++ ++E+ +G E ++ IC A P + D Sbjct: 82 DYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDPSGAYFAWKATAMGKSYVNGKTFLEKRYNEDLE--LEDAIHTAILTLKESFEGQMTEENIEVGICNEAGFRRLSPAEVKD 228
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA6_SOYBN (Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.436e-17 Identity = 53/153 (34.64%), Postives = 86/153 (56.21%), Query Frame = -3 Query: 319 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGL-DEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEP-FHILDQETVQK 771 D R L + R+E + +TY +PV L +ADK+QV TQ ++ RP GV +V G+ DE G LY P+G+YF ++A + G + Q A +LE++ +N T E+ ++ A+ A++ LQ E K++ V VV P F +L + + + Sbjct: 86 DARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISALQSVLQ-EDFKATEIEVGVVRKDNPEFRVLTTDEIDE 237
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA4_SPIOL (Proteasome subunit alpha type-4 OS=Spinacia oleracea GN=PAC1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.181e-17 Identity = 52/136 (38.24%), Postives = 81/136 (59.56%), Query Frame = -3 Query: 367 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV 771 D +L R + Y+++Y+ P+PV +LV L D Q TQ RP+GV L AG D+ G LY + PSGNY ++A AIG+ +QAA++ L++ +++ + TRED +K AL A+ +T+ +L S +A V Sbjct: 82 DANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKATAIGANNQAAQSMLKQDYKD--DVTREDAVKLALKALSKTMDSTSLTSEKLELAEV 215
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA6_TOBAC (Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.154e-17 Identity = 52/153 (33.99%), Postives = 88/153 (57.52%), Query Frame = -3 Query: 319 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLD-EKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEP-FHILDQETVQK 771 D R L + R+E + + Y +PV L +ADK+QV TQ ++ RP GV ++ G+D EKG L+ P+G++F ++A + GS+ Q A +LE++ +N + E+ ++ A+ A++ LQ E K+S V VV +P F +L E + + Sbjct: 86 DARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIADKSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLEKKMKNDPAFSYEETVQTAISALQSVLQ-EDFKASEIEVGVVKKEDPIFRVLTTEEIDE 237
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 7.086e-17 Identity = 50/153 (32.68%), Postives = 87/153 (56.86%), Query Frame = -3 Query: 319 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNC-PSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEP-FHILDQETVQK 771 D R L + R++ + +TY +PV L +ADK+QV TQ ++ RP GV +V G+DE+ L Y C P+G+++ ++A + G + Q A +LE++ + T ++ ++ A+ A++ LQ E K++ V VV A P F L E +++ Sbjct: 86 DARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQSVLQ-EDFKATEIEVGVVRAENPEFRALTTEEIEE 237
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_XENLA (Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16 Identity = 48/129 (37.21%), Postives = 73/129 (56.59%), Query Frame = -3 Query: 385 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 771 D RVL R R Y Y+ P+P +LV ++A Q TQ RP+GV LL+AG DE +L+ + PSG YF ++A A+G KT+LE+R+ E ED I A++ ++E+ +G+ + +I Sbjct: 82 DYRVLVRRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLE--LEDAIHTAILTLKESFEGQMTEDNI 208 The following BLAST results are available for this feature:
BLAST of CX672130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672130 ID=CX672130; Name=CX672130; organism=Citrus sinensis; type=EST; length=773bpback to top |