CX672130

Overview
NameCX672130
Unique NameCX672130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_SCHPO (Probable proteasome subunit alpha type-2 OS=Schizosaccharomyces pombe GN=SPCC1442.06 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.203e-18
Identity = 53/120 (44.17%), Postives = 73/120 (60.83%), Query Frame = -3
Query:  367 YSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV 726
            Y   Y    P   LV ++A   Q  TQ    RP+GV LLVAG+DEKG  LY   PSG YF ++A AIG  S AAKT+LE+R+ +  E   +D +  A++A++ET +GE  + +I  +AVV
Sbjct:   97 YKKIYNEYPPTKILVQEIASVMQESTQSGGVRPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYND--ELELDDAVHTAILALKETFEGELTEDNI-EIAVV 213          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_TRYBB (Proteasome subunit alpha type-2 OS=Trypanosoma brucei brucei PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.877e-18
Identity = 56/154 (36.36%), Postives = 81/154 (52.60%), Query Frame = -3
Query:  310 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLID 771
            D RVL    R  C  Y  TY  P+P+ +LV Q++   Q  TQ    RP+G  LLVAG D +G HLY   PSG ++ ++A +IG  S  A+T+LE+R+ N  E   ED +  AL+ ++E   G     +     VV     F +L  E ++  +D
Sbjct:   80 DCRVLVDAARRACQRYRLTYHEPMPISQLVRQISFLFQEFTQSGGVRPFGCSLLVAGADSRGNHLYQLDPSGTFWTWKATSIGKGSPDARTFLEKRYTN--EMEIEDAVHTALLTLKEGFDGRMTAENTQVGRVVEG--RFELLTVEQLKDYLD 229          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSJ (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.093e-17
Identity = 51/157 (32.48%), Postives = 85/157 (54.14%), Query Frame = -3
Query:  301 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 771
            D RVL R  R +   Y   Y+  +PV +LV + A   Q  TQ    RP+GV LL+AG D+ G  LY   PSG+YF ++A A+G     AKT+LE+R+    E   +D I  A++ ++E  +G+   ++I  + ++ +   F +L    ++  ++  +
Sbjct:   82 DFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDME--LDDAIHTAILTLKEGYEGQISANNI-EIGIIRSDREFKVLSPAEIKDFLEEVE 235          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSI (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica GN=PAB1 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.093e-17
Identity = 51/157 (32.48%), Postives = 85/157 (54.14%), Query Frame = -3
Query:  301 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 771
            D RVL R  R +   Y   Y+  +PV +LV + A   Q  TQ    RP+GV LL+AG D+ G  LY   PSG+YF ++A A+G     AKT+LE+R+    E   +D I  A++ ++E  +G+   ++I  + ++ +   F +L    ++  ++  +
Sbjct:   82 DFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDME--LDDAIHTAILTLKEGYEGQISANNI-EIGIIRSDREFKVLSPAEIKDFLEEVE 235          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_CARAU (Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 1.865e-17
Identity = 54/149 (36.24%), Postives = 79/149 (53.02%), Query Frame = -3
Query:  337 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQG----ETLKSSICTVAVVGAGEPFHILD 771
            D RVL R  R     Y   Y+ P+P G+LV ++A   Q  TQ    RP+GV LL+AG DE   +L+ + PSG YF ++A A+G      KT+LE+R+    E   ED I  A++ ++E+ +G    E ++  IC  A      P  + D
Sbjct:   82 DYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDPSGAYFAWKATAMGKSYVNGKTFLEKRYNEDLE--LEDAIHTAILTLKESFEGQMTEENIEVGICNEAGFRRLSPAEVKD 228          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA6_SOYBN (Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.436e-17
Identity = 53/153 (34.64%), Postives = 86/153 (56.21%), Query Frame = -3
Query:  319 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGL-DEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEP-FHILDQETVQK 771
            D R L +  R+E   + +TY   +PV  L   +ADK+QV TQ ++ RP GV  +V G+ DE G  LY   P+G+YF ++A + G + Q A  +LE++ +N    T E+ ++ A+ A++  LQ E  K++   V VV    P F +L  + + +
Sbjct:   86 DARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISALQSVLQ-EDFKATEIEVGVVRKDNPEFRVLTTDEIDE 237          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA4_SPIOL (Proteasome subunit alpha type-4 OS=Spinacia oleracea GN=PAC1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.181e-17
Identity = 52/136 (38.24%), Postives = 81/136 (59.56%), Query Frame = -3
Query:  367 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV 771
            D  +L    R +   Y+++Y+ P+PV +LV  L D  Q  TQ    RP+GV  L AG D+  G  LY + PSGNY  ++A AIG+ +QAA++ L++ +++  + TRED +K AL A+ +T+   +L S    +A V
Sbjct:   82 DANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKATAIGANNQAAQSMLKQDYKD--DVTREDAVKLALKALSKTMDSTSLTSEKLELAEV 215          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA6_TOBAC (Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.154e-17
Identity = 52/153 (33.99%), Postives = 88/153 (57.52%), Query Frame = -3
Query:  319 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLD-EKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEP-FHILDQETVQK 771
            D R L +  R+E   + + Y   +PV  L   +ADK+QV TQ ++ RP GV  ++ G+D EKG  L+   P+G++F ++A + GS+ Q A  +LE++ +N    + E+ ++ A+ A++  LQ E  K+S   V VV   +P F +L  E + +
Sbjct:   86 DARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIADKSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLEKKMKNDPAFSYEETVQTAISALQSVLQ-EDFKASEIEVGVVKKEDPIFRVLTTEEIDE 237          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 7.086e-17
Identity = 50/153 (32.68%), Postives = 87/153 (56.86%), Query Frame = -3
Query:  319 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNC-PSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEP-FHILDQETVQK 771
            D R L +  R++   + +TY   +PV  L   +ADK+QV TQ ++ RP GV  +V G+DE+   L Y C P+G+++ ++A + G + Q A  +LE++ +     T ++ ++ A+ A++  LQ E  K++   V VV A  P F  L  E +++
Sbjct:   86 DARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQSVLQ-EDFKATEIEVGVVRAENPEFRALTTEEIEE 237          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_XENLA (Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16
Identity = 48/129 (37.21%), Postives = 73/129 (56.59%), Query Frame = -3
Query:  385 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 771
            D RVL R  R     Y   Y+ P+P  +LV ++A   Q  TQ    RP+GV LL+AG DE   +L+ + PSG YF ++A A+G      KT+LE+R+    E   ED I  A++ ++E+ +G+  + +I
Sbjct:   82 DYRVLVRRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLE--LEDAIHTAILTLKESFEGQMTEDNI 208          
The following BLAST results are available for this feature:
BLAST of CX672130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
PSA2_SCHPO2.203e-1844.17Probable proteasome subunit alpha type-2 OS=Schizo... [more]
PSA2_TRYBB2.877e-1836.36Proteasome subunit alpha type-2 OS=Trypanosoma bru... [more]
PSA2_ORYSJ1.093e-1732.48Proteasome subunit alpha type-2 OS=Oryza sativa su... [more]
PSA2_ORYSI1.093e-1732.48Proteasome subunit alpha type-2 OS=Oryza sativa su... [more]
PSA2_CARAU1.865e-1736.24Proteasome subunit alpha type-2 OS=Carassius aurat... [more]
PSA6_SOYBN2.436e-1734.64Proteasome subunit alpha type-6 OS=Glycine max GN=... [more]
PSA4_SPIOL3.181e-1738.24Proteasome subunit alpha type-4 OS=Spinacia olerac... [more]
PSA6_TOBAC4.154e-1733.99Proteasome subunit alpha type-6 OS=Nicotiana tabac... [more]
PSA6A_ARATH7.086e-1732.68Proteasome subunit alpha type-6-A OS=Arabidopsis t... [more]
PSA2_XENLA1.209e-1637.21Proteasome subunit alpha type-2 OS=Xenopus laevis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15B07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15B07-D13-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672130 ID=CX672130; Name=CX672130; organism=Citrus sinensis; type=EST; length=773bp
GTTTGTACTGATAAGGCAAGATAAATTGCACCATAAGCGGAAAAATAAAT
TGTCCAACAGAATGATTTCCCGAAGTGCAACCCATATTCCATGGAACCCA
TCAAACACATGCTTAAACTCCTCATCTAAAGACGAAGACGAAGAAGCTGA
CTTCTGGTCCTTGCATCCTCAAATGTCCATTGGAGCTACACCCTCGTCTG
CTGGAGCACCCTGTTCTGAAGCTGCGCCTCCTTCTGCAGCACTGCCTCCT
TCTGCAGCACTATCTGGTGCAGCAGCAGGACCCTCTTCAGTGCCAGCAAT
GTCAAATGAATCAATTAACTTTTGTACAGTTTCTTGATCTAAAATATGAA
ATGGCTCCCCAGCTCCTACCACAGCAACTGTGCAAATAGAACTCTTTAGT
GTTTCTCCTTGTAAGGTTTCCCTTATTGCCATGAGAGCGTCCTTGATCAG
ATCTTCTCTTGTAGATTCTGAAAAGTTCTCAAACCTGCGTTCCAAGTATG
TCTTTGCAGCTTGAGATCGGGACCCAATGGCAAATGCTTGATACTCAAAA
TAGTTCCCACTTGGGCAGTTATAATAAAGGTGGGCTCCTTTTTCATCCAA
GCCAGCAACCAGCAGGCCAACACCATATGGCCGTTTCCATGAGCGCTGGG
TACAGACCTGAGCCTTGTCAGCGAGCTGGACAACAAGGCGGCCGACAGGA
AGCGGCGACTCGTAAGTGTAACTGTAGTTAATACACTCGGATCGCATGTA
CCGAGACAGAACACGGCCGTCGG
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