EG358329

Overview
NameEG358329
Unique NameEG358329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.898e-27
Identity = 56/81 (69.14%), Postives = 71/81 (87.65%), Query Frame = 2
Query:    5 LGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 247
            LG PEKPL+LP FSL++GRK+VGGS IGGMKETQEM++F AKH I +DIE+I    +N+A++RLAK+DVRYRFVIDVAN++
Sbjct:  273 LGLPEKPLDLPIFSLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVANSL 353          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.759e-26
Identity = 54/84 (64.29%), Postives = 70/84 (83.33%), Query Frame = 2
Query:    5 LGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 256
            +G P KPL+LP F L+ GRK++GGS  GG+KETQEM+DF  KHNI A+IE+I  D +NTA+ERL+KADV+YRFVIDVAN++ S+
Sbjct:  269 VGLPSKPLQLPIFPLVAGRKLIGGSNFGGLKETQEMLDFCGKHNIAANIELIKMDEINTAIERLSKADVKYRFVIDVANSLSSS 352          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 6.686e-26
Identity = 56/83 (67.47%), Postives = 66/83 (79.52%), Query Frame = 2
Query:    5 LGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 253
            +G P KPLEL  F L+ GRK++GGS IGGMKETQEM+DF  KHNI ADIE+I    +NTA+ERL KADV+YRFVIDVAN+  S
Sbjct:  276 VGLPSKPLELSVFPLVAGRKLIGGSNIGGMKETQEMLDFCGKHNITADIELIKMHEINTAMERLHKADVKYRFVIDVANSFSS 358          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 6.686e-26
Identity = 54/84 (64.29%), Postives = 70/84 (83.33%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 253
            L+G PEKPL++P F+L+ G KI+ GS +G + ETQEMIDFAA+H + ADIE+I AD VNTA+ERLAK DVRYRFV+D+ NT++S
Sbjct:  295 LVGLPEKPLQIPTFALVGGGKILAGSCMGSISETQEMIDFAAEHGVAADIELIGADEVNTAMERLAKGDVRYRFVVDIGNTLRS 378          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.140e-25
Identity = 57/82 (69.51%), Postives = 67/82 (81.71%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 247
            L+G PE PLE+P FSL+ G + + GS IGGM +TQEMI+ AAKH + ADIEVI AD VNTA+ERLAKADVRYRFVIDV NT+
Sbjct:  279 LVGLPENPLEVPPFSLVHGNRTLAGSNIGGMADTQEMIELAAKHGVTADIEVIGADDVNTAMERLAKADVRYRFVIDVGNTL 360          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 2.541e-25
Identity = 56/83 (67.47%), Postives = 68/83 (81.93%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 250
            L+G PEKP+E+P F+L+   K + GS IGGM +T EMID AAKH + A+IEVI ADYVNTA+ERLAKADVRYRFVID+ NT+K
Sbjct:  269 LVGLPEKPMEIPPFALVASNKTLAGSCIGGMADT-EMIDLAAKHGVTAEIEVIGADYVNTAMERLAKADVRYRFVIDIGNTLK 350          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.261e-24
Identity = 53/81 (65.43%), Postives = 68/81 (83.95%), Query Frame = 2
Query:    5 LGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 247
            LG  EKPL+LP F L++GRK+VGGS IGGMKETQEM++F AKH I +DIE+I    +N+A++RL K+DVRYRFVIDVAN++
Sbjct:  272 LGLLEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLVKSDVRYRFVIDVANSL 352          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH6_ORYSJ (Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 3.106e-23
Identity = 50/83 (60.24%), Postives = 63/83 (75.90%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 250
            L+GAPEKP+ELP+F L+ G++ V GSM GGMKETQEM+D   +HNI  DIE++  D +N AL RLA+ DVRYRFVI+V    K
Sbjct:  277 LVGAPEKPVELPSFPLIFGKRTVSGSMTGGMKETQEMMDICGEHNITCDIEIVSTDRINDALARLARNDVRYRFVINVGGDSK 359          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 2.907e-21
Identity = 46/80 (57.50%), Postives = 64/80 (80.00%), Query Frame = 2
Query:    5 LGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 244
            +GAP +PLELPA++++ G K + G+ +GG+++ Q M+DFA +H I A++EVI  DYVNTA+ERL K DVRYRFVIDVA +
Sbjct:  347 VGAPTRPLELPAYAIVPGGKGITGNCVGGIRDCQAMLDFAGEHGITAEVEVIKMDYVNTAMERLEKNDVRYRFVIDVAGS 426          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.476e-21
Identity = 48/81 (59.26%), Postives = 62/81 (76.54%), Query Frame = 2
Query:    5 LGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 247
            +G+P KP++L  + L    K V GSMIGGM++TQEM+DFA +H + A++EVI  + VN A+ERL K DVRYRFVIDVANTM
Sbjct:  278 VGSPGKPVQLALYPLQSDGKSVAGSMIGGMRDTQEMVDFAVEHGVAAEVEVIGMEDVNGAMERLQKGDVRYRFVIDVANTM 358          
The following BLAST results are available for this feature:
BLAST of EG358329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CADH2_ARATH7.898e-2769.14Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
MTDH1_STYHU1.759e-2664.29Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
MTDH_MEDSA6.686e-2667.47Probable mannitol dehydrogenase OS=Medicago sativa... [more]
CADH7_ORYSJ6.686e-2664.29Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
CADH3_ORYSJ1.140e-2569.51Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
CADH5_ORYSJ2.541e-2567.47Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
CADH3_ARATH1.261e-2465.43Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
CADH6_ORYSJ3.106e-2360.24Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza... [more]
CAD8B_ORYSJ2.907e-2157.50Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CADH9_ORYSJ6.476e-2159.26Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]

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Properties
Property NameValue
Genbank description2h8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0002h8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358329 ID=EG358329; Name=EG358329; organism=Citrus sinensis; type=EST; length=525bp
ACTTCTTGGTGCACCAGAGAAGCCACTGGAGCTACCAGCTTTCTCCCTGC
TCATGGGGAGGAAGATAGTTGGTGGCAGCATGATTGGGGGGATGAAGGAG
ACTCAAGAGATGATTGATTTTGCGGCAAAACACAACATCAGAGCTGATAT
TGAGGTCATACCGGCCGACTATGTGAACACAGCCCTGGAGCGCCTTGCTA
AAGCCGATGTTAGATATCGCTTTGTCATCGACGTTGCAAACACAATGAAG
TCCACCCCTTAAAATTTTCTTCCTTTTGAGTTGCGCTTAAAATGAGGAAT
GTGCGTTTATTGTCGAGTCACAACATCGTCTAAGTTTTAGATTATGTTAG
TCTTTTGTTGTGATTTCAAATCTGTTTTTGCTTTTTAAGAATAATAATTT
GGTGACGTATATTCCATCTGTGTGACAAATTTATGTAATAGCGAGCTATA
TGTTAGTTTTTACCGAAATTAATTATTCGGGTTTTGATTTAGTAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAGG
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