EG358329

Overview
NameEG358329
Unique NameEG358329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CAD8C_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8C OS=Oryza sativa subsp. japonica GN=CAD8C PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 8.458e-21
Identity = 45/80 (56.25%), Postives = 63/80 (78.75%), Query Frame = 2
Query:    5 LGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 244
            +G P +PLELPA++++ G K + G+ +GG+++ Q M+DFA +H I A++EVI  DYVNTA+ERL K DVRYRFVIDVA +
Sbjct:  350 VGGPTRPLELPAYAIVPGGKGITGNCVGGIRDCQAMLDFAGEHGITAEVEVIKMDYVNTAMERLEKNDVRYRFVIDVAGS 429          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.482e-20
Identity = 45/78 (57.69%), Postives = 61/78 (78.21%), Query Frame = 2
Query:    5 LGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVA 238
            +GAP KP     FSL+MGR+ + GS++GG++ETQEM+DFAA+H I   IEVI AD V+ A ER+ ++DVRYRFVID++
Sbjct:  270 VGAPAKPDTYSVFSLIMGRRSIAGSLVGGIQETQEMLDFAAEHGIEPKIEVIGADQVDEAYERILRSDVRYRFVIDIS 347          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.641e-19
Identity = 44/82 (53.66%), Postives = 60/82 (73.17%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 247
            ++GAP  PL+LPA++++ G K V G+ +G + E Q M+DFA +H I AD+EV+  D VN AL RL + DVRYRFV+DVA TM
Sbjct:  271 VVGAPAMPLQLPAYAIIEGGKRVAGNGVGSVAECQAMLDFAGEHGIAADVEVVAMDAVNAALGRLERNDVRYRFVVDVAGTM 352          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.303e-18
Identity = 45/78 (57.69%), Postives = 59/78 (75.64%), Query Frame = 2
Query:    2 LLGAPEKPLELP-AFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVID 232
            L+GAP  P + P  F+L+M R+ + GSMIGG+ ETQEM+DF A+H I ADIE+I AD +N A ER+ + DV+YRFVID
Sbjct:  266 LVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVID 343          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.303e-18
Identity = 41/78 (52.56%), Postives = 59/78 (75.64%), Query Frame = 2
Query:    5 LGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVA 238
            LG PE P+ +PAF+L + R+ + GS IGG+ ETQEM++F A+H +  +IE+I  DY+N A ER+  +DVRYRFVID++
Sbjct:  267 LGIPEHPMAVPAFALALMRRSLAGSNIGGIAETQEMLNFCAEHGVTPEIELIEPDYINDAYERVLASDVRYRFVIDIS 344          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.303e-18
Identity = 41/78 (52.56%), Postives = 59/78 (75.64%), Query Frame = 2
Query:    5 LGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVA 238
            LG PE P+ +PAF+L + R+ + GS IGG+ ETQEM++F A+H +  +IE+I  DY+N A ER+  +DVRYRFVID++
Sbjct:  267 LGIPEHPMAVPAFALALMRRSLAGSNIGGIAETQEMLNFCAEHGVTPEIELIEPDYINDAYERVLASDVRYRFVIDIS 344          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH_PINTA (Probable cinnamyl alcohol dehydrogenase OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 6.702e-18
Identity = 42/81 (51.85%), Postives = 58/81 (71.60%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 244
            +LG   +PL      L++GR+ + GS IGGM+ETQE +DF A+  + + IEV+  DY+NTA+ERL K DVRYRFV+DVA +
Sbjct:  273 MLGVVPEPLHFVTPPLILGRRSIAGSFIGGMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLEKNDVRYRFVVDVAGS 353          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.950e-17
Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 244
            L+G    PL+  +  +++GRK + GS IG MKET+EM+DF  +  I + IEV+  DY+NTA ERL K DVRYRFV+DVA +
Sbjct:  274 LMGVINTPLQFISPMVMLGRKAITGSFIGSMKETEEMLDFCNEKGITSTIEVVKMDYINTAFERLEKNDVRYRFVVDVAGS 354          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.326e-17
Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 244
            L G    PL+  +  +++GRK + GS IG MKET+EM++F  +  + + IEVI  DYVNTALERL K DVRYRFV+DVA +
Sbjct:  272 LTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVAGS 352          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.326e-17
Identity = 41/81 (50.62%), Postives = 57/81 (70.37%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 244
            +LG   +PL      L++GR+ + GS IG M+ETQE +DF A+  + + IEV+  DY+NTA+ERL K DVRYRFV+DVA +
Sbjct:  273 MLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLVKNDVRYRFVVDVARS 353          
The following BLAST results are available for this feature:
BLAST of EG358329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CAD8C_ORYSJ8.458e-2156.25Probable cinnamyl alcohol dehydrogenase 8C OS=Oryz... [more]
ADHA_BACSU5.482e-2057.69Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]
CAD8D_ORYSJ4.641e-1953.66Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]
YAHK_ECOLI2.303e-1857.69Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADHC_MYCTU2.303e-1852.56NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO2.303e-1852.56NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
CADH_PINTA6.702e-1851.85Probable cinnamyl alcohol dehydrogenase OS=Pinus t... [more]
CADH1_ARACO1.950e-1751.85Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CADH_EUCBO3.326e-1753.09Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH2_PICAB3.326e-1750.62Probable cinnamyl alcohol dehydrogenase 2 OS=Picea... [more]

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Properties
Property NameValue
Genbank description2h8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0002h8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358329 ID=EG358329; Name=EG358329; organism=Citrus sinensis; type=EST; length=525bp
ACTTCTTGGTGCACCAGAGAAGCCACTGGAGCTACCAGCTTTCTCCCTGC
TCATGGGGAGGAAGATAGTTGGTGGCAGCATGATTGGGGGGATGAAGGAG
ACTCAAGAGATGATTGATTTTGCGGCAAAACACAACATCAGAGCTGATAT
TGAGGTCATACCGGCCGACTATGTGAACACAGCCCTGGAGCGCCTTGCTA
AAGCCGATGTTAGATATCGCTTTGTCATCGACGTTGCAAACACAATGAAG
TCCACCCCTTAAAATTTTCTTCCTTTTGAGTTGCGCTTAAAATGAGGAAT
GTGCGTTTATTGTCGAGTCACAACATCGTCTAAGTTTTAGATTATGTTAG
TCTTTTGTTGTGATTTCAAATCTGTTTTTGCTTTTTAAGAATAATAATTT
GGTGACGTATATTCCATCTGTGTGACAAATTTATGTAATAGCGAGCTATA
TGTTAGTTTTTACCGAAATTAATTATTCGGGTTTTGATTTAGTAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAGG
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