EG358329

Overview
NameEG358329
Unique NameEG358329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH2_ORYSJ (Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CAD2 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.066e-15
Identity = 38/81 (46.91%), Postives = 55/81 (67.90%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 244
            L+G   +PL   +  +++GRK + GS IG M ET+E+++F     + + IEV+  DYVN ALERL + DVRYRFV+DVA +
Sbjct:  273 LMGVINQPLSFISPMVMLGRKAITGSFIGSMAETEEVLNFCVDKGLTSQIEVVKMDYVNQALERLERNDVRYRFVVDVAGS 353          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.310e-15
Identity = 40/83 (48.19%), Postives = 58/83 (69.88%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 250
            L+G P +    PA +L +G +++ GS+ GG K TQ+M+DF A H I  +IEVIP   +N ALER+ K D++YRFVID+ N++K
Sbjct:  274 LVGFPSEIKISPA-NLNLGMRMLAGSVTGGTKITQQMLDFCAAHKIYPNIEVIPIQKINEALERVVKKDIKYRFVIDIKNSLK 355          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.442e-14
Identity = 35/78 (44.87%), Postives = 53/78 (67.95%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDV 235
            L+G    PL+     +++GRK + GS +G +KET+EM++F  +  + + IE++  DY+N A ERL K DVRYRFV+DV
Sbjct:  274 LMGVINTPLQFVTPMVMLGRKSITGSFVGSVKETEEMLEFWKEKGLTSMIEIVTMDYINKAFERLEKNDVRYRFVVDV 351          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.495e-14
Identity = 36/81 (44.44%), Postives = 55/81 (67.90%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 244
            L+G   +PL   +  +++GRK + GS IG ++ET+E++ F     + + IEV+  DY+N ALERL + DVRYRFV+DVA +
Sbjct:  274 LMGVIGEPLSFVSPMVMLGRKTITGSFIGSIEETEEVLRFCVDKGLTSQIEVVKMDYLNQALERLERNDVRYRFVVDVAGS 354          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.308e-13
Identity = 35/81 (43.21%), Postives = 53/81 (65.43%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 244
            L+G    PL+     +++GRK++ GS IG +KET+E++ F  +  + + IE +  D +N A ERL K DVRYRFV+DVA +
Sbjct:  274 LMGVINTPLQFVTPLVILGRKVISGSFIGSIKETEEVLAFCKEKGLTSTIETVKIDELNIAFERLRKNDVRYRFVVDVAGS 354          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.308e-13
Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 244
            L G    PL+    S ++  + + GS IG MKET+EM++F  +  + + IEVI  DYVNTALERL K DVRYRFV+DV  +
Sbjct:  273 LTGVINAPLQF--ISPMVMLESITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGS 351          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.708e-13
Identity = 37/81 (45.68%), Postives = 52/81 (64.20%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 244
            LLG   +PL   +  +++GRK + GS IG + ET E++ F     + + IEV+   YVN ALERL + DVRYRFV+DVA +
Sbjct:  273 LLGVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGS 353          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH1_ORYSJ (Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=CAD1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.231e-13
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 250
            LL  P +    PA +L +G + + GS+ GG K+ QEMI+F A + I  DIE+I  DY+N AL+RL   DVR+RFVID+ N+ K
Sbjct:  273 LLSFPSEIKVHPA-NLNLGGRSLSGSVTGGTKDIQEMINFCAANKIYPDIEMIKIDYINEALQRLVDRDVRFRFVIDIENSFK 354          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH_SACOF (Probable cinnamyl alcohol dehydrogenase OS=Saccharum officinarum GN=CAD PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.805e-13
Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 244
            LLG   +PL   +  +++GRK + GS IG + ET E++ F     + + IEV+   YVN AL+RL + DVRYRFV+DVA +
Sbjct:  273 LLGVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALDRLERNDVRYRFVVDVAGS 353          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.805e-13
Identity = 35/69 (50.72%), Postives = 49/69 (71.01%), Query Frame = 2
Query:   44 SLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 250
            +L +  + + GS+ GG K+ QEMI+F A +N+  DIE+I  DYVN AL+RL   DVR+RFVID+ N+ K
Sbjct:  286 NLNLAARSLAGSVTGGTKDIQEMINFCAANNVYPDIEMIKIDYVNEALQRLINRDVRFRFVIDIENSFK 354          
The following BLAST results are available for this feature:
BLAST of EG358329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CADH2_ORYSJ4.066e-1546.91Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa s... [more]
CADH1_ARATH5.310e-1548.19Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
CADH_MEDSA3.442e-1444.87Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH_LOLPR4.495e-1444.44Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]
CADH4_ARATH1.308e-1343.21Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH1_EUCGU1.308e-1349.38Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]
CADH_MAIZE1.708e-1345.68Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]
CADH1_ORYSJ2.231e-1348.19Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza... [more]
CADH_SACOF3.805e-1344.44Probable cinnamyl alcohol dehydrogenase OS=Sacchar... [more]
CADH4_ORYSJ3.805e-1350.72Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]

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Properties
Property NameValue
Genbank description2h8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0002h8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358329 ID=EG358329; Name=EG358329; organism=Citrus sinensis; type=EST; length=525bp
ACTTCTTGGTGCACCAGAGAAGCCACTGGAGCTACCAGCTTTCTCCCTGC
TCATGGGGAGGAAGATAGTTGGTGGCAGCATGATTGGGGGGATGAAGGAG
ACTCAAGAGATGATTGATTTTGCGGCAAAACACAACATCAGAGCTGATAT
TGAGGTCATACCGGCCGACTATGTGAACACAGCCCTGGAGCGCCTTGCTA
AAGCCGATGTTAGATATCGCTTTGTCATCGACGTTGCAAACACAATGAAG
TCCACCCCTTAAAATTTTCTTCCTTTTGAGTTGCGCTTAAAATGAGGAAT
GTGCGTTTATTGTCGAGTCACAACATCGTCTAAGTTTTAGATTATGTTAG
TCTTTTGTTGTGATTTCAAATCTGTTTTTGCTTTTTAAGAATAATAATTT
GGTGACGTATATTCCATCTGTGTGACAAATTTATGTAATAGCGAGCTATA
TGTTAGTTTTTACCGAAATTAATTATTCGGGTTTTGATTTAGTAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAGG
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