EG358327

Overview
NameEG358327
Unique NameEG358327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length539
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.870e-27
Identity = 52/90 (57.78%), Postives = 66/90 (73.33%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            YSRTV +++++  +I+PAGW+EW  DFAL TL+Y EY N GPGS T+ RVKW GYHV+TSP    QFTV   I G SWL +T V +T+GL
Sbjct:  454 YSRTVVMESYISDVIDPAGWLEWDRDFALKTLFYGEYRNGGPGSGTSERVKWPGYHVITSPEVAEQFTVAELIQGGSWLGSTGVDYTAGL 543          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 6.393e-27
Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = 1
Query:  121 LYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            LYSRTV+I+  +  ++ P GW+EW+ DFAL+TL+Y E+MN GPGS  ++RVKW GYHV  +  Q + FTV  FI GN WLP+T V F+ GL
Sbjct:  433 LYSRTVFIRNNMSDVVRPEGWLEWNADFALDTLFYGEFMNYGPGSGLSSRVKWPGYHVFNNSDQANNFTVSQFIKGNLWLPSTGVTFSDGL 523          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.090e-26
Identity = 50/90 (55.56%), Postives = 66/90 (73.33%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            +SRTV ++++LD  I+P+GW EW GDFAL TLYY E+MN GPG+ T+ RVKW GYHV+T P++   FTV   I G SWL +T+V +  GL
Sbjct:  453 HSRTVVMQSYLDGHIDPSGWFEWRGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPNEAMPFTVAELIQGGSWLNSTSVAYVEGL 542          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.860e-26
Identity = 53/91 (58.24%), Postives = 67/91 (73.63%), Query Frame = 1
Query:  121 LYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            LYSR VY+ + +   I+P GW+EW+G FAL++LYY EYMN G GS    RVKW GYHV+TS  + S+FTV  FI+G+SWLP+T V F SGL
Sbjct:  495 LYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPGYHVITSTVEASKFTVAQFISGSSWLPSTGVSFFSGL 585          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.429e-26
Identity = 53/92 (57.61%), Postives = 68/92 (73.91%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEW--SGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            YSR   +KT++D+ I+P GW  W    +FALNT++Y EY N GPGSST  RV+W+G+H +TS +  S+FTVG+ IAG SWLPAT VPF SGL
Sbjct:  503 YSRVTIMKTYIDNSISPLGWSPWLRGSNFALNTVFYGEYKNFGPGSSTRWRVRWKGFHAITSTAVASRFTVGSLIAGGSWLPATGVPFKSGL 594          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.429e-26
Identity = 52/91 (57.14%), Postives = 68/91 (74.73%), Query Frame = 1
Query:  121 LYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            LYSRTVY+ T++  L+ P GW+EW G+FAL+TL+Y EY N GPG  ++ RVKW GYH++   + +S FTVG+FI G  WLPAT V FT+GL
Sbjct:  452 LYSRTVYMNTYMSQLVQPRGWLEWFGNFALDTLWYGEYNNIGPGWRSSGRVKWPGYHIMDKRTALS-FTVGSFIDGRRWLPATGVTFTAGL 541          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.173e-26
Identity = 53/92 (57.61%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEW--SGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            +SRTV ++T+LD++++P GW  W     F L+TL+YAEY NTGP SST  RV W+G+HVL   S  S FTVG FIAG +WLP T +PFTSGL
Sbjct:  445 FSRTVVLQTYLDNVVSPVGWSPWIEGSVFGLDTLFYAEYKNTGPASSTRWRVSWKGFHVLGRASDASAFTVGKFIAGTAWLPRTGIPFTSGL 536          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 3.173e-26
Identity = 50/90 (55.56%), Postives = 69/90 (76.67%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            YSRTV++++++D ++ P GW EW+GDFAL+TLYYAEY NTG GSST +RV W GYHV+ S +  + FTV NF+ G+ W+  + VP+ SGL
Sbjct:  483 YSRTVFMQSYIDEVVEPVGWREWNGDFALSTLYYAEYNNTGSGSSTTDRVVWPGYHVINS-TDANNFTVENFLLGDGWMVQSGVPYISGL 571          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.144e-26
Identity = 49/89 (55.06%), Postives = 65/89 (73.03%), Query Frame = 1
Query:  121 LYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTS 387
            LYSRTV +++FL ++I P GW+EW+GDFALN+L+Y EYMN GPG+   +RVKW GY V    +Q   +TV  FI GN WLP+T V +T+
Sbjct:  430 LYSRTVIMQSFLSNVIRPEGWLEWNGDFALNSLFYGEYMNYGPGAGLGSRVKWPGYQVFNESTQAKNYTVAQFIEGNLWLPSTGVKYTA 518          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.412e-26
Identity = 50/94 (53.19%), Postives = 70/94 (74.47%), Query Frame = 1
Query:  118 LLYSRTVYIKTFLDSLINPAGWMEWS--GDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            ++YSRTV +KT++DS+++P GW  W+    + L+TL+YAEY N GP SST  RV+W+G+HVL+  S  S F+VG FIAG +WLP + +PFTS L
Sbjct:  447 MMYSRTVVLKTYIDSVVSPVGWSPWTKGSTYGLDTLFYAEYKNIGPASSTRWRVRWKGFHVLSKASDASAFSVGKFIAGTAWLPGSGIPFTSEL 540          
The following BLAST results are available for this feature:
BLAST of EG358327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
PME1_FICAW2.870e-2757.78Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME44_ARATH6.393e-2754.95Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME3_SOLLC1.090e-2655.56Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]
PME61_ARATH1.860e-2658.24Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME33_ARATH2.429e-2657.61Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME22_ARATH2.429e-2657.14Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME59_ARATH3.173e-2657.61Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME41_ARATH3.173e-2655.56Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME_PRUPE4.144e-2655.06Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME60_ARATH5.412e-2653.19Probable pectinesterase/pectinesterase inhibitor 6... [more]

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Properties
Property NameValue
Genbank description13d8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0013d8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358327 ID=EG358327; Name=EG358327; organism=Citrus sinensis; type=EST; length=539bp
ACATGTAGTCCGGCAAATTTTTGAGATTTCAAGTTCAAATTGGTTTTGCA
GCAGAGCACATCATAGTATAGAATTGTATAAGTGATATGTATTTTCTTGG
ATATGGAGGGTTTTGTCCTCTTGTACTCGCGAACCGTTTATATCAAGACC
TTCCTTGACAGCTTGATAAACCCCGCTGGATGGATGGAATGGAGTGGTGA
TTTTGCTTTGAATACTCTGTATTATGCTGAGTATATGAACACTGGCCCGG
GTTCTTCAACTGCTAACAGAGTCAAGTGGCGTGGCTATCACGTTCTTACC
AGTCCGTCCCAGGTTAGCCAGTTCACCGTAGGCAACTTTATTGCTGGAAA
TTCTTGGTTGCCGGCCACCAACGTCCCCTTCACCTCCGGTCTCTAGGTTG
ATCATTCTTTGTTTATATTTTATTGCACATGAAATTAATACCAACTTGTT
GAGGTAATTAGGAGGAAAAATAATAATAATAAGGTAGTTAAAAGGAACTA
CCATCTTGGCATTGTCAGTTGTTATTCTTTGTGAAGTTG
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